HG10018137.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018137.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein MAK16 homolog
Location	Chr04: 734782 .. 735353 (+)
Sequence length	360
RNA-Seq Expression	HG10018137.1
Synteny	HG10018137.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACAATTGAAAGAACTCATAAGCCAAATGAGTTGTGGGAAAGAGTTAGTTTGCCCAGAAATTATGAAAAGGCACTGGAAATTGTAGATAAACATATGGTAAGTGATCATCTTATTGAGTTATGCTCAATATCTTTAACTGTTTGATTTTCTTTTATTAAATCTCCAACCTATACTTTATGCCCTTTGACAGATGTATTGGCCTAAGGTACTTGTACACAAGACAAAGCAACGAGTGACTAAATTGACCCAAATGAGGATGCGAATGAGGAAGCTTGCTTTGGAAACAAGGCTGAGAAAGCAGAAGGCTGAGAAAGCAGCATTGTTGGATAAGGTTTAGTATTTGGATATTCTTGATATTGAAACTAATGGGGTCTTTCTTCGTTTCTATTAGAATGATTTTTTCTATTGTGCAGGAAATATACCATAATGTATTAGTTATTAACATTTAGTCCTATTGTGCAGGAATTAATGCACCAACTTCACAGTCCTTCATAAACTATGTCCTCTTGGCAATTGTCTACGGAAGTGTTGATAGCACCGTAAAAATGCTATCTAGCTTCGCTTAA

mRNA sequence

ATGAAAACAATTGAAAGAACTCATAAGCCAAATGAGTTGTGGGAAAGAGTTAGTTTGCCCAGAAATTATGAAAAGGCACTGGAAATTGTAGATAAACATATGATGTATTGGCCTAAGGTACTTGTACACAAGACAAAGCAACGAGTGACTAAATTGACCCAAATGAGGATGCGAATGAGGAAGCTTGCTTTGGAAACAAGGCTGAGAAAGCAGAAGGCTGAGAAAGCAGCATTGTTGGATAAGTCCTATTGTGCAGGAATTAATGCACCAACTTCACAGTCCTTCATAAACTATGTCCTCTTGGCAATTGTCTACGGAAGTGTTGATAGCACCGTAAAAATGCTATCTAGCTTCGCTTAA

Coding sequence (CDS)

ATGAAAACAATTGAAAGAACTCATAAGCCAAATGAGTTGTGGGAAAGAGTTAGTTTGCCCAGAAATTATGAAAAGGCACTGGAAATTGTAGATAAACATATGATGTATTGGCCTAAGGTACTTGTACACAAGACAAAGCAACGAGTGACTAAATTGACCCAAATGAGGATGCGAATGAGGAAGCTTGCTTTGGAAACAAGGCTGAGAAAGCAGAAGGCTGAGAAAGCAGCATTGTTGGATAAGTCCTATTGTGCAGGAATTAATGCACCAACTTCACAGTCCTTCATAAACTATGTCCTCTTGGCAATTGTCTACGGAAGTGTTGATAGCACCGTAAAAATGCTATCTAGCTTCGCTTAA

Protein sequence

MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMRKLALETRLRKQKAEKAALLDKSYCAGINAPTSQSFINYVLLAIVYGSVDSTVKMLSSFA

Homology

[Close]

BLAST of HG10018137.1 vs. NCBI nr
Match: XP_022145243.1 (protein MAK16 homolog A isoform X1 [Momordica charantia])

HSP 1 Score: 135.6 bits (340), Expect = 2.8e-28
Identity = 72/97 (74.23%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPKVLVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKVLVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. NCBI nr
Match: XP_022145244.1 (protein MAK16 homolog isoform X2 [Momordica charantia])

HSP 1 Score: 135.6 bits (340), Expect = 2.8e-28
Identity = 72/97 (74.23%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPKVLVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKVLVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. NCBI nr
Match: XP_022932560.1 (protein MAK16 homolog [Cucurbita moschata])

HSP 1 Score: 135.2 bits (339), Expect = 3.7e-28
Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPK+LVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKILVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. NCBI nr
Match: XP_023526010.1 (protein MAK16 homolog A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 135.2 bits (339), Expect = 3.7e-28
Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPK+LVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKILVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. NCBI nr
Match: KAG6597661.1 (Protein MAK16-like A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135.2 bits (339), Expect = 3.7e-28
Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPK+LVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKILVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. ExPASy Swiss-Prot
Match: Q9UTE6 (Protein mak16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mak16 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-13
Identity = 34/65 (52.31%), Postives = 51/65 (78.46%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER H P++LW+R+ L +NY KALE +D+ ++YWP   +H+ KQR+T+LTQ  ++ R
Sbjct: 64  MKTIERAHFPSKLWQRIKLSKNYAKALEQIDQQLLYWPGRQIHRCKQRLTRLTQYLLKAR 123

Query: 61  KLALE 66
           +LAL+
Sbjct: 124 RLALK 128

[Close]

BLAST of HG10018137.1 vs. ExPASy Swiss-Prot
Match: Q9BXY0 (Protein MAK16 homolog OS=Homo sapiens OX=9606 GN=MAK16 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MK IER   P  LWERV L +NYEKALE +D++++YWP+ + HK KQR TK+TQ  +R+R
Sbjct: 65  MKVIERAAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYLIRIR 124

Query: 61  KLALETRLRK 71
           KL L+ R RK
Sbjct: 125 KLTLK-RQRK 133

[Close]

BLAST of HG10018137.1 vs. ExPASy Swiss-Prot
Match: Q8BGS0 (Protein MAK16 homolog OS=Mus musculus OX=10090 GN=Mak16 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MK IER   P  LWERV L +NYEKALE +D++++YWP+ + HK KQR TK+TQ  +R+R
Sbjct: 65  MKVIERAAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYLIRIR 124

Query: 61  KLALETRLRK 71
           KL L+ R RK
Sbjct: 125 KLTLK-RQRK 133

[Close]

BLAST of HG10018137.1 vs. ExPASy Swiss-Prot
Match: Q1RML7 (Protein MAK16 homolog OS=Bos taurus OX=9913 GN=MAK16 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-13
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MK IER   P  LWERV L +NYEKALE +D++++YWP+ + HK KQR TK+TQ  +R+R
Sbjct: 65  MKVIERAAFPRRLWERVRLHKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYLIRIR 124

Query: 61  KLALETRLRK 71
           KL L+ R RK
Sbjct: 125 KLTLK-RQRK 133

[Close]

BLAST of HG10018137.1 vs. ExPASy Swiss-Prot
Match: Q6NYD4 (Protein MAK16 homolog OS=Danio rerio OX=7955 GN=mak16 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.8e-13
Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MK IER   P+ +WE+V L RNY KALE +D++++YWP+ + HK KQR+TK+TQ  +R+R
Sbjct: 65  MKVIERAAFPSRMWEKVKLDRNYAKALEQIDENLIYWPRFIRHKCKQRLTKITQYLIRIR 124

Query: 61  KLALETRLRK 71
           KL L+ R RK
Sbjct: 125 KLTLK-RQRK 133

[Close]

BLAST of HG10018137.1 vs. ExPASy TrEMBL
Match: A0A6J1CUN3 (Protein MAK16 homolog OS=Momordica charantia OX=3673 GN=LOC111014743 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.4e-28
Identity = 72/97 (74.23%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPKVLVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKVLVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. ExPASy TrEMBL
Match: A0A6J1CVF0 (Protein MAK16 homolog OS=Momordica charantia OX=3673 GN=LOC111014743 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.4e-28
Identity = 72/97 (74.23%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPKVLVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKVLVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. ExPASy TrEMBL
Match: A0A6J1GW65 (Protein MAK16 homolog OS=Cucurbita moschata OX=3662 GN=LOC111458042 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.8e-28
Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPK+LVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKILVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. ExPASy TrEMBL
Match: A0A6J1I571 (Protein MAK16 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470779 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.8e-28
Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPK+LVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKILVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. ExPASy TrEMBL
Match: A0A6J1F2I3 (Protein MAK16 homolog OS=Cucurbita moschata OX=3662 GN=LOC111439081 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.8e-28
Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER HKPNELWERV LPRNYEKALEI+DKH+MYWPK+LVHKTKQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHKPNELWERVKLPRNYEKALEIIDKHLMYWPKILVHKTKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R+QKAEKAALLDKS
Sbjct: 124 KLALKTREKIMTTPRKEIKREARREQKAEKAALLDKS 160

[Close]

BLAST of HG10018137.1 vs. TAIR 10
Match: AT1G23280.1 (MAK16 protein-related )

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-25
Identity = 60/97 (61.86%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 1   MKTIERTHKPNELWERVSLPRNYEKALEIVDKHMMYWPKVLVHKTKQRVTKLTQMRMRMR 60
           MKTIER H PN+LWERV LP NYEKALE++DKH++YWPK+L HK KQR+TK+TQMR+RMR
Sbjct: 64  MKTIERAHMPNKLWERVKLPVNYEKALEMIDKHLLYWPKLLQHKVKQRLTKMTQMRIRMR 123

Query: 61  KLALETR---------------LRKQKAEKAALLDKS 83
           KLAL+TR                R++KA KAA LDK+
Sbjct: 124 KLALKTREVVVTTPRRQIKRESRREEKAIKAAQLDKA 160

[Close]

BLAST of HG10018137.1 vs. TAIR 10
Match: AT3G59310.1 (Eukaryotic protein of unknown function (DUF914) )

HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 0


Query: 86  GINAPTSQSFINYVLLAIVYGSV 109
           GIN PTSQ F+NYVLLAIVYGS+
Sbjct: 41  GINVPTSQCFLNYVLLAIVYGSI 63

[Close]

BLAST of HG10018137.1 vs. TAIR 10
Match: AT3G59310.2 (Eukaryotic protein of unknown function (DUF914) )

HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 0


Query: 86  GINAPTSQSFINYVLLAIVYGSV 109
           GIN PTSQ F+NYVLLAIVYGS+
Sbjct: 41  GINVPTSQCFLNYVLLAIVYGSI 63

[Close]

BLAST of HG10018137.1 vs. TAIR 10
Match: AT3G59330.1 (Eukaryotic protein of unknown function (DUF914) )

HSP 1 Score: 42.0 bits (97), Expect = 4.0e-04
Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 0


Query: 86  GINAPTSQSFINYVLLAIVYGS 108
           GINAPTSQSF+ YVLLAIVYG+
Sbjct: 68  GINAPTSQSFLGYVLLAIVYGA 89

The following BLAST results are available for this feature:

BLAST of HG10018137.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145243.1	2.8e-28	74.23	protein MAK16 homolog A isoform X1 [Momordica charantia]	[more]
XP_022145244.1	2.8e-28	74.23	protein MAK16 homolog isoform X2 [Momordica charantia]	[more]
XP_022932560.1	3.7e-28	73.20	protein MAK16 homolog [Cucurbita moschata]	[more]
XP_023526010.1	3.7e-28	73.20	protein MAK16 homolog A-like [Cucurbita pepo subsp. pepo]	[more]
KAG6597661.1	3.7e-28	73.20	Protein MAK16-like A, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of HG10018137.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UTE6	2.1e-13	52.31	Protein mak16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 G...	[more]
Q9BXY0	2.7e-13	57.14	Protein MAK16 homolog OS=Homo sapiens OX=9606 GN=MAK16 PE=1 SV=2	[more]
Q8BGS0	2.7e-13	57.14	Protein MAK16 homolog OS=Mus musculus OX=10090 GN=Mak16 PE=1 SV=1	[more]
Q1RML7	3.5e-13	57.14	Protein MAK16 homolog OS=Bos taurus OX=9913 GN=MAK16 PE=2 SV=1	[more]
Q6NYD4	7.8e-13	54.29	Protein MAK16 homolog OS=Danio rerio OX=7955 GN=mak16 PE=2 SV=1	[more]

BLAST of HG10018137.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUN3	1.4e-28	74.23	Protein MAK16 homolog OS=Momordica charantia OX=3673 GN=LOC111014743 PE=3 SV=1	[more]
A0A6J1CVF0	1.4e-28	74.23	Protein MAK16 homolog OS=Momordica charantia OX=3673 GN=LOC111014743 PE=3 SV=1	[more]
A0A6J1GW65	1.8e-28	73.20	Protein MAK16 homolog OS=Cucurbita moschata OX=3662 GN=LOC111458042 PE=3 SV=1	[more]
A0A6J1I571	1.8e-28	73.20	Protein MAK16 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470779 PE=3 SV=1	[more]
A0A6J1F2I3	1.8e-28	73.20	Protein MAK16 homolog OS=Cucurbita moschata OX=3662 GN=LOC111439081 PE=3 SV=1	[more]

BLAST of HG10018137.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23280.1	1.4e-25	61.86	MAK16 protein-related	[more]
AT3G59310.1	2.3e-04	82.61	Eukaryotic protein of unknown function (DUF914)	[more]
AT3G59310.2	2.3e-04	82.61	Eukaryotic protein of unknown function (DUF914)	[more]
AT3G59330.1	4.0e-04	86.36	Eukaryotic protein of unknown function (DUF914)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..81
None	No IPR available	PANTHER	PTHR23405	MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED	coord: 1..68
None	No IPR available	PANTHER	PTHR23405:SF4	PROTEIN MAK16 HOMOLOG	coord: 1..68
IPR009262	Solute carrier family 35 member SLC35F1/F2/F6	PFAM	PF06027	SLC35F	coord: 86..108 e-value: 5.3E-5 score: 22.9
IPR029004	Ribosomal L28e/Mak16	PFAM	PF01778	Ribosomal_L28e	coord: 1..54 e-value: 2.5E-11 score: 44.3

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10018137	HG10018137	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10018137.1-cds	HG10018137.1-cds-Chr04:734782..734883	CDS
HG10018137.1-cds	HG10018137.1-cds-Chr04:734978..735118	CDS
HG10018137.1-cds	HG10018137.1-cds-Chr04:735237..735353	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10018137.1	HG10018137.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0022857	transmembrane transporter activity