HG10001957 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCATTCGTTTGGAGAAGGATATGCGACGAGATCGGATGAAGAAGGGTTCGGCGGAGTTTACAATCATCAGAATCAGTCATTTCCTAAAACCCATGGGAATCAGATTATTCAAGATGCCAATCAACCTGGTCTCTCTCATTATTTCTATTTAATCTCCACTTGAATTTCAGATGATTTTTCTTTGATTTTTGTGTTTCTCCAATTTGGGTTGTACTAGTACTTTTCTATAATTTTTATATTTATACATTGTTTTGTTTTGGACAGGTTATGATAAGAGTCAAGGGAGCGAAGTAAAGGAGAAGGAACAAGCAAGAAATCAGAGCAATGCAAGTGCTTAA ATGTCGCATTCGTTTGGAGAAGGATATGCGACGAGATCGGATGAAGAAGGGTTCGGCGGAGTTTACAATCATCAGAATCAGTCATTTCCTAAAACCCATGGGAATCAGATTATTCAAGATGCCAATCAACCTGGTTATGATAAGAGTCAAGGGAGCGAAGTAAAGGAGAAGGAACAAGCAAGAAATCAGAGCAATGCAAGTGCTTAA ATGTCGCATTCGTTTGGAGAAGGATATGCGACGAGATCGGATGAAGAAGGGTTCGGCGGAGTTTACAATCATCAGAATCAGTCATTTCCTAAAACCCATGGGAATCAGATTATTCAAGATGCCAATCAACCTGGTTATGATAAGAGTCAAGGGAGCGAAGTAAAGGAGAAGGAACAAGCAAGAAATCAGAGCAATGCAAGTGCTTAA MSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA Homology
BLAST of HG10001957 vs. NCBI nr
Match: XP_022136799.1 (uncharacterized protein LOC111008409 [Momordica charantia]) HSP 1 Score: 105.5 bits (262), Expect = 1.8e-19 Identity = 54/68 (79.41%), Postives = 61/68 (89.71%), Query Frame = 0
BLAST of HG10001957 vs. NCBI nr
Match: XP_015889917.1 (uncharacterized protein LOC107424585 [Ziziphus jujuba]) HSP 1 Score: 87.4 bits (215), Expect = 5.1e-14 Identity = 48/63 (76.19%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of HG10001957 vs. NCBI nr
Match: KAF3440795.1 (hypothetical protein FNV43_RR19081 [Rhamnella rubrinervis]) HSP 1 Score: 87.0 bits (214), Expect = 6.6e-14 Identity = 50/68 (73.53%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of HG10001957 vs. NCBI nr
Match: XP_034225880.1 (uncharacterized protein LOC117635652 [Prunus dulcis]) HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13 Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of HG10001957 vs. NCBI nr
Match: VVA09714.1 (PREDICTED: LOC110634367 isoform [Prunus dulcis]) HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13 Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of HG10001957 vs. ExPASy TrEMBL
Match: A0A6J1C5D2 (uncharacterized protein LOC111008409 OS=Momordica charantia OX=3673 GN=LOC111008409 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.7e-20 Identity = 54/68 (79.41%), Postives = 61/68 (89.71%), Query Frame = 0
BLAST of HG10001957 vs. ExPASy TrEMBL
Match: A0A6P4AUZ7 (uncharacterized protein LOC107424585 OS=Ziziphus jujuba OX=326968 GN=LOC107424585 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.5e-14 Identity = 48/63 (76.19%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of HG10001957 vs. ExPASy TrEMBL
Match: A0A5E4E1S5 (PREDICTED: LOC110634367 isoform OS=Prunus dulcis OX=3755 GN=ALMOND_2B025633 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.2e-14 Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of HG10001957 vs. ExPASy TrEMBL
Match: M5WF00 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G153900 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.4e-14 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of HG10001957 vs. ExPASy TrEMBL
Match: A0A314YVV4 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_08517 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.4e-14 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of HG10001957 vs. TAIR 10
Match: AT5G66780.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 2.7e-13 Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|