Homology
BLAST of HG10007982 vs. NCBI nr
Match:
XP_038880665.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa hispida] >XP_038880666.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa hispida] >XP_038880667.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa hispida] >XP_038880668.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa hispida])
HSP 1 Score: 1571.6 bits (4068), Expect = 0.0e+00
Identity = 784/840 (93.33%), Postives = 814/840 (96.90%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MA+LPFPA TNPL SLY RKPH+SPTHFANLNQ AGNVQISYKSYLNQISSLCKE LR
Sbjct: 1 MAALPFPALTNPLASLYIPRKPHSSPTHFANLNQTAGNVQISYKSYLNQISSLCKEAHLR 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
+AV+LVADME ENITIGPDVYGELLQGCVYERALSLGQQIHGRI+KNGEYIA NEYIETK
Sbjct: 61 EAVNLVADMELENITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SEIANRLFGKL VQNEF+WAAIMGLKSR+GFNEEAL+ FCEMHENGLLLD
Sbjct: 121 LVIFYSKCDESEIANRLFGKLLVQNEFAWAAIMGLKSRIGFNEEALMGFCEMHENGLLLD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIALKASGALQWIGFGK+VQGYV+KMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALQWIGFGKSVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVT+SSFLSASANLSVIDE
Sbjct: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTLSSFLSASANLSVIDE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKVGLVE+AE VFSEMLEKD+VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAEQVFSEMLEKDMVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+ALDLC VMQSENLRFDSVTLASIMAAAADS+NLKLGKEGHSFCVRNNLESD+AV
Sbjct: 361 NGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSKNLKLGKEGHSFCVRNNLESDIAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSIVDMYAKC KLECAR+VFDTTVKRDL+MWNTLLAAYAEQGQSGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDMYAKCEKLECARQVFDTTVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEVD+AKDMFLEMQSLGVCP LITWTTLICGLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDEAKDMFLEMQSLGVCPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYI RH+LLVSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYIIRHDLLVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAK VFD I+KKELPIYNA+ISGYALHGQAVEALSLF RLKE+CI+PDEITFTS
Sbjct: 601 KCGSINQAKTVFDMIMKKELPIYNAMISGYALHGQAVEALSLFRRLKEDCIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
ILSACSHAGLVTEGLELFIDMVSNHKI+AQA+HYGCL+SILSRCHNLDEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLISILSRCHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDA IFGSLLAACREHPD ELKERLFE LLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDASIFGSLLAACREHPDLELKERLFEHLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
LMKERGLRKTPGHSLIQIGN+THVFFAGDKSHSR KEIYMMLALL VEMQSTRCI VIS
Sbjct: 781 VLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSRTKEIYMMLALLRVEMQSTRCIPVIS 840
BLAST of HG10007982 vs. NCBI nr
Match:
XP_011656577.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis sativus] >XP_011656582.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis sativus] >KGN65393.1 hypothetical protein Csa_019708 [Cucumis sativus])
HSP 1 Score: 1518.8 bits (3931), Expect = 0.0e+00
Identity = 757/840 (90.12%), Postives = 796/840 (94.76%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MA+LPFP PTNP+ SLY+ RKPH SPTHFA+ +Q A NVQISYKSYLN ISSLCK+G L
Sbjct: 1 MAALPFPLPTNPIYSLYTPRKPHYSPTHFASFSQIASNVQISYKSYLNHISSLCKQGHLL 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
+A+DLV D+E E+ITIGPDVYGELLQGCVYERALSLGQQIHGRI+KNGE IA NEYIETK
Sbjct: 61 EALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SEIANRLFGKL+VQNEFSWAAIMGLKSR+GFN+EAL+ F EMHE GLLLD
Sbjct: 121 LVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIA KASGAL+WIGFGK+V YV+KMGLGGCIYVA+SLLDMYGKCGLC +AKKVFD
Sbjct: 181 NFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KI EKNIVAWNSMIVNFTQNGLNAEA+ETFYEMRVEGV PTQVT+SSFLSASANLSVIDE
Sbjct: 241 KILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKVGLVE+AELVFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+ALDLC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSI+DMYAKC KLECARRVFD T KRDL+MWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPNVISWNSVILGLLNKG+VD+AKD F+EMQSLG+CP LITWTTLICGLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQSMEEAGIKPNSLSISSLLSAC+TMASLPHGRAIHCYITRHEL VSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAKRVFD ILKKELP+YNA+ISGYALHGQAVEALSLF RLKEECI+PDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
ILSAC HAGLV EGLELFIDMVSNHKI+AQA+HYGCLVSILSR HNLDEALR+ILGMPFE
Sbjct: 661 ILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
LMKER L K PGHSLIQIGNKTHVFFAGDKSHSR KEIYMMLALL VEMQ TRCISVIS
Sbjct: 781 GLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMMLALLRVEMQFTRCISVIS 840
BLAST of HG10007982 vs. NCBI nr
Match:
XP_023531196.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1516.5 bits (3925), Expect = 0.0e+00
Identity = 752/840 (89.52%), Postives = 798/840 (95.00%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MA+LPF PT PL SLYS+RK HNSPTH A LN++AGN QISYKSYLN+ISSLCKEGDLR
Sbjct: 1 MAALPFVTPTYPLASLYSTRKLHNSPTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
AVDLV+++E + IT+GPDVYGELLQGCVYERALSLGQQIHGRI+KNGE+IA NEYIETK
Sbjct: 61 AAVDLVSNLELQGITVGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SEIANRLF KLRVQNEFSWAAIMGLK R+GFNEEAL+CFC+MHENGL LD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNEFSWAAIMGLKCRIGFNEEALLCFCDMHENGLFLD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIALKASG+LQWIGFGKA+ GY +KMGLGGCI+VASSLLDMYGKCG+CGDA+KVFD
Sbjct: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMGLGGCIFVASSLLDMYGKCGVCGDARKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KIPEKNIVAWNSMIVNFT NGL EAIETFY+MRVEGV PTQVT+S+FLSASANLS+I+E
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAIETFYDMRVEGVEPTQVTLSTFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSK+GLVE+AELVFSEMLEKDVVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAELVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSIVD YAKCGKLECARRVF+ T+KRDL+MWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFELTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPN+ISWNSVILGLLNKGEV KAKDMFLEMQSLGVCP L+TWTTLI GL+QNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLSQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQSM+EAGIKPNSLSIS LLSACTTMASL HGRAIH YITR EL +STPVLCSLVNMYA
Sbjct: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAKR+FD ILKKELPIYNA+ISGYALHGQAVEALSLF RLKEECI+PDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
ILSACSHAGLVTEGLELFIDMVSNHKI+AQA+HYGCLVSILSRCHNLDEALRLIL MPFE
Sbjct: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPD ELKERL ERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDAFIFGSLLAACREHPDVELKERLSERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHS+ KEIY MLALLG+EMQ TRCI VIS
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSKTKEIYKMLALLGIEMQVTRCIPVIS 840
BLAST of HG10007982 vs. NCBI nr
Match:
TYJ98107.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1505.0 bits (3895), Expect = 0.0e+00
Identity = 755/840 (89.88%), Postives = 790/840 (94.05%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MA+LPFP PTNPL SLY+ RK HNS T+FA+LNQ AGNVQISYKSYLNQISSLCK+G L
Sbjct: 1 MAALPFPLPTNPLPSLYTPRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
+A+DLV D+E +ITIGPDVYGELLQGCVYERALSLGQQIHGRI+KNGEYIA NEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SE ANRLF KL+VQNEFSWAAIMGLKSR+ FNEEAL+ F EMHE GL+LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIALKASGAL+WIGFGK+V GYV+KMGLG CIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KIPEKNIVAWNSMIV+FTQNG NAEAIETFYEMRVEGV PTQVT+SSFLSASANL VI E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSI+DMYAKC LECARRVF+ +KRDL+MWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEVDKAKDMF+EMQSLG+CP LITWTTLICGLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQSMEEAGIKPNSLSISSLLSAC+TMASLPHGRAIHCYITR EL VSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAKRVFD ILKKELP+YNA+ISGYALHGQA EALSLF RLKEE I+PDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEEYIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
ILSACSHAGLV EGLELFIDMVSNHKI+AQA+HYGCLVSILSR HNLDEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLL ACREHPDFELKE LFERLLKLEPDNSGNYVALSNAYAATGMWDEA KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
LMKER LRK PGHSLIQIGNKTHVFFAGDKSHSR KEIYM LALL +EMQSTRCISVIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of HG10007982 vs. NCBI nr
Match:
XP_008463338.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis melo] >XP_008463339.1 PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis melo] >XP_008463340.1 PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis melo] >XP_008463341.1 PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis melo] >KAA0043370.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1505.0 bits (3895), Expect = 0.0e+00
Identity = 755/840 (89.88%), Postives = 791/840 (94.17%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MA+LPFP PTNPL SLY+SRK HNS T+FA+LNQ AGNVQISYKSYLNQISSLCK+G L
Sbjct: 1 MAALPFPLPTNPLPSLYTSRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
+A+DLV D+E +ITIGPDVYGELLQGCVYERALSLGQQIHGRI+KNGEYIA NEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SE ANRLF KL+VQNEFSWAAIMGLKSR+ FNEEAL+ F EMHE GL+LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIALKASGAL+WIGFGK+V GYV+KMGLG CIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KIPEKNIVAWNSMIV+FTQNG NAEAIETFYEMRVEGV PTQVT+SSFLSASANL VI E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSI+DMYAKC LECARRVF+ +KRDL+MWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEVDKAKDMF+EMQSLG+CP LITWTTLICGLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQSMEEAGIKPNSLSISSLLSAC+TMASLPHGRAIHCYITR EL VSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAKRVFD ILKKELP+YNA+ISGYALHGQA EALSLF RLKEECI+PDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
ILSACSHAGLV EGLELFIDMVS HKI+AQA+HYGCLVSILSR HNLDEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSFHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLL ACREHPDFELKE LFERLLKLEPDNSGNYVALSNAYAATGMWDEA KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
LMKER LRK PGHSLIQIGNKTHVFFAGDKS+SR KEIYM LALL +EMQSTRCISVIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSNSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of HG10007982 vs. ExPASy Swiss-Prot
Match:
Q9FM64 (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1)
HSP 1 Score: 924.9 bits (2389), Expect = 6.7e-268
Identity = 460/838 (54.89%), Postives = 619/838 (73.87%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSR---KPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEG 60
MASLPF N + SS+ K H+ H S SY +++SSLCK G
Sbjct: 1 MASLPFNTIPNKVPFSVSSKPSSKHHDEQAH-----------SPSSTSYFHRVSSLCKNG 60
Query: 61 DLRQAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYI 120
++++A+ LV +M+F N+ IGP++YGE+LQGCVYER LS G+QIH RI+KNG++ A NEYI
Sbjct: 61 EIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYI 120
Query: 121 ETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGL 180
ETKLVIFY+KCD EIA LF KLRV+N FSWAAI+G+K R+G E AL+ F EM EN +
Sbjct: 121 ETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEI 180
Query: 181 LLDNFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKK 240
DNFVVP KA GAL+W FG+ V GYV+K GL C++VASSL DMYGKCG+ DA K
Sbjct: 181 FPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASK 240
Query: 241 VFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSV 300
VFD+IP++N VAWN+++V + QNG N EAI F +MR +GV PT+VT+S+ LSASAN+
Sbjct: 241 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 300
Query: 301 IDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSG 360
++EGKQ HA+A+++G+EL NILG+SL+NFY KVGL+E AE+VF M EKDVVTWNL++SG
Sbjct: 301 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 360
Query: 361 YVHNGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESD 420
YV GLV+ A+ +C++M+ E L++D VTLA++M+AAA + NLKLGKE +C+R++ ESD
Sbjct: 361 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 420
Query: 421 VAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQL 480
+ +AS+++DMYAKCG + A++VFD+TV++DL++WNTLLAAYAE G SGE L+LFY MQL
Sbjct: 421 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 480
Query: 481 EGLPPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDE 540
EG+PPNVI+WN +IL LL G+VD+AKDMFL+MQS G+ P LI+WTT++ G+ QNG +E
Sbjct: 481 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 540
Query: 541 AFLTFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITR---HELLVSTPVLCS 600
A L + M+E+G++PN+ SI+ LSAC +ASL GR IH YI R H LVS + S
Sbjct: 541 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS--IETS 600
Query: 601 LVNMYAKCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPD 660
LV+MYAKCG IN+A++VF + L ELP+ NA+IS YAL+G EA++L+ L+ ++PD
Sbjct: 601 LVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPD 660
Query: 661 EITFTSILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLI 720
IT T++LSAC+HAG + + +E+F D+VS + +HYG +V +L+ ++ALRLI
Sbjct: 661 NITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLI 720
Query: 721 LGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWD 780
MPF+PDA + SL+A+C + EL + L +LL+ EP+NSGNYV +SNAYA G WD
Sbjct: 721 EEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWD 780
Query: 781 EASKVRDLMKERGLRKTPGHSLIQIGNK--THVFFAGDKSHSRIKEIYMMLALLGVEM 831
E K+R++MK +GL+K PG S IQI + HVF A DK+H+RI EI MMLALL +M
Sbjct: 781 EVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
BLAST of HG10007982 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 439.5 bits (1129), Expect = 8.5e-122
Identity = 278/876 (31.74%), Postives = 449/876 (51.26%), Query Frame = 0
Query: 1 MASLPFPAP-TNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDL 60
MAS+ P P L SRK + P N N + N + +L +IS+ C+ GDL
Sbjct: 1 MASVLLPLPQVFVLFDYRRSRKESSFPRAVYNSNSISSN-STNANHFLRRISNFCETGDL 60
Query: 61 ----RQAVDLVADMEFEN--ITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIAN 120
R + V D E + + + G LLQ + + +G++IH +++ + N
Sbjct: 61 DKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIH-QLVSGSTRLRN 120
Query: 121 NEYIETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEM- 180
++ + T+++ Y+ C + + +F LR +N F W A++ SR +E L F EM
Sbjct: 121 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 180
Query: 181 HENGLLLDNFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLC 240
LL D+F P +KA + +G G AV G V+K GL ++V ++L+ YG G
Sbjct: 181 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 240
Query: 241 GDAKKVFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVE----GVVPTQVTISSF 300
DA ++FD +PE+N+V+WNSMI F+ NG + E+ EM E +P T+ +
Sbjct: 241 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 300
Query: 301 LSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDV 360
L A I GK H AV L+ +L ++L++ YSK G + NA+++F K+V
Sbjct: 301 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 360
Query: 361 VTWNLLVSGYVHNGLVDQALDLCRVMQS--ENLRFDSVTLASIMAAAADSRNLKLGKEGH 420
V+WN +V G+ G D+ R M + E+++ D VT+ + + L KE H
Sbjct: 361 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 420
Query: 421 SFCVRNNLESDVAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSG 480
+ ++ + VA++ V YAKCG L A+RVF + + WN L+ +A+
Sbjct: 421 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 480
Query: 481 ETLKLFYQMQLEGLPPNVISWNSV---------------ILGLLNKGEVDKAKDMFLEMQ 540
+L QM++ GL P+ + S+ + G + + +++ ++L +
Sbjct: 481 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 540
Query: 541 SLGV-----C-----------PTLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSL 600
SL + C +L++W T+I G QNG D A F+ M GI+ +
Sbjct: 541 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 600
Query: 601 SISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYAKCGSINQAKRVFDTI 660
S+ + AC+ + SL GR H Y +H L + CSL++MYAK GSI Q+ +VF+ +
Sbjct: 601 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 660
Query: 661 LKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTSILSACSHAGLVTEGL 720
+K +NA+I GY +HG A EA+ LF ++ PD++TF +L+AC+H+GL+ EGL
Sbjct: 661 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 720
Query: 721 ELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLIL-GMPFEPDAFIFGSLLAACR 780
M S+ + KHY C++ +L R LD+ALR++ M E D I+ SLL++CR
Sbjct: 721 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 780
Query: 781 EHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRDLMKERGLRKTPGH 831
H + E+ E++ +L +LEP+ NYV LSN YA G W++ KVR M E LRK G
Sbjct: 781 IHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 840
BLAST of HG10007982 vs. ExPASy Swiss-Prot
Match:
Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 436.0 bits (1120), Expect = 9.4e-121
Identity = 280/883 (31.71%), Postives = 438/883 (49.60%), Query Frame = 0
Query: 42 SYKSYLNQISSLCKEGD-LRQAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQI 101
++ S L+ SS+ K G LR V L + F N + +L C E + G+QI
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPN----KFTFSIVLSTCARETNVEFGRQI 186
Query: 102 HGRIIKNGEYIANNEYIETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLG 161
H +IK G + N Y LV Y+KCD+ A R+F + N W + + G
Sbjct: 187 HCSMIKMG--LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 246
Query: 162 FNEEALVCFCEMHENGLLLDN--FVVPI-------------------------------- 221
EEA++ F M + G D+ FV I
Sbjct: 247 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 306
Query: 222 --------------------------------ALKASGALQWIGFGKAVQGYVIKMGLGG 281
L A G + + G V IK+GL
Sbjct: 307 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 366
Query: 282 CIYVASSLLDMYGKCGLCGDAKKVFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMR 341
IYV SSL+ MY KC A KVF+ + EKN V WN+MI + NG + + +E F +M+
Sbjct: 367 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 426
Query: 342 VEGVVPTQVTISSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVE 401
G T +S LS A ++ G Q H++ + L +G++L++ Y+K G +E
Sbjct: 427 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 486
Query: 402 NAELVFSEMLEKDVVTWNLLVSGYVHNGLVDQALDLCRVMQSENLRFDSVTLASIMAAAA 461
+A +F M ++D VTWN ++ YV + +A DL + M + D LAS + A
Sbjct: 487 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 546
Query: 462 DSRNLKLGKEGHSFCVRNNLESDVAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNT 521
L GK+ H V+ L+ D+ SS++DMY+KCG ++ AR+VF + + +V N
Sbjct: 547 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 606
Query: 522 LLAAYAEQGQSGETLKLFYQMQLEGLPPNVISWNSVI----------LGLLNKGEVDK-- 581
L+A Y+ Q E + LF +M G+ P+ I++ +++ LG G++ K
Sbjct: 607 LIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 666
Query: 582 --AKDMFLEMQSLGV----------C---------PTLITWTTLICGLAQNGLGDEAFLT 641
++ +L + LG+ C +++ WT ++ G +QNG +EA
Sbjct: 667 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 726
Query: 642 FQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYAK 701
++ M G+ P+ + ++L C+ ++SL GRAIH I + +L++MYAK
Sbjct: 727 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 786
Query: 702 CGSINQAKRVFDTILKKELPI-YNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 761
CG + + +VFD + ++ + +N+LI+GYA +G A +AL +F +++ I PDEITF
Sbjct: 787 CGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 846
Query: 762 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 821
+L+ACSHAG V++G ++F M+ + I A+ H C+V +L R L EA I +
Sbjct: 847 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 906
Query: 822 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 824
PDA ++ SLL ACR H D E E+L++LEP NS YV LSN YA+ G W++A+ +R
Sbjct: 907 PDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR 966
BLAST of HG10007982 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 430.3 bits (1105), Expect = 5.2e-119
Identity = 260/803 (32.38%), Postives = 429/803 (53.42%), Query Frame = 0
Query: 54 CKEGDLRQAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIAN 113
C +G L +A + D+ N + + + +L+ C RA+S G+Q+H RI K
Sbjct: 59 CFDGVLTEAFQRL-DVSENNSPV--EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSF-E 118
Query: 114 NEYIETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMH 173
+++ KLV Y KC + A ++F ++ + F+W ++G G AL + M
Sbjct: 119 LDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR 178
Query: 174 ENGLLLDNFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCG 233
G+ L P LKA L+ I G + ++K+G ++ ++L+ MY K
Sbjct: 179 VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLS 238
Query: 234 DAKKVFDKIPEK-NIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSAS 293
A+++FD EK + V WNS++ +++ +G + E +E F EM + G P TI S L+A
Sbjct: 239 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 298
Query: 294 ANLSVIDEGKQGHALAVLSGLELTNI-LGSSLINFYSKVGLVENAELVFSEMLEKDVVTW 353
S GK+ HA + S + + + ++LI Y++ G + AE + +M DVVTW
Sbjct: 299 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW 358
Query: 354 NLLVSGYVHNGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVR 413
N L+ GYV N + +AL+ M + + D V++ SI+AA+ NL G E H++ ++
Sbjct: 359 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 418
Query: 414 NNLESDVAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKL 473
+ +S++ V ++++DMY+KC R F +DL+ W T++A YA+ E L+L
Sbjct: 419 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 478
Query: 474 F-----YQMQL-EGLPPNVISWNSVILG----------LLNKGEVD-----KAKDMFLEM 533
F +M++ E + +++ +SV+ +L KG +D + D++ +
Sbjct: 479 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKC 538
Query: 534 QSLGVC---------PTLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLL 593
+++G +++WT++I A NG EA F+ M E G+ +S+++ +L
Sbjct: 539 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 598
Query: 594 SACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYAKCGSINQAKRVFDTILKKELP 653
SA ++++L GR IHCY+ R + + ++V+MYA CG + AK VFD I +K L
Sbjct: 599 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 658
Query: 654 IYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTSILSACSHAGLVTEGLELFIDM 713
Y ++I+ Y +HG A+ LF +++ E + PD I+F ++L ACSHAGL+ EG M
Sbjct: 659 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 718
Query: 714 VSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFEPDAFIFGSLLAACREHPDFEL 773
+++ +HY CLV +L R + + EA + M EP A ++ +LLAACR H + E+
Sbjct: 719 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEI 778
Query: 774 KERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRDLMKERGLRKTPGHSLIQIGN 825
E +RLL+LEP N GN V +SN +A G W++ KVR MK G+ K PG S I++
Sbjct: 779 GEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDG 838
BLAST of HG10007982 vs. ExPASy Swiss-Prot
Match:
Q9FXH1 (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)
HSP 1 Score: 424.9 bits (1091), Expect = 2.2e-117
Identity = 247/765 (32.29%), Postives = 399/765 (52.16%), Query Frame = 0
Query: 49 QISSLCKEGDLRQAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNG 108
Q LC+ G L +A + + + + Y +LL+ C+ ++ LG+ +H R G
Sbjct: 52 QFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---G 111
Query: 109 EYIANNEYIETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVC 168
+ + ++ETKL+ Y+KC A ++F +R +N F+W+A++G SR E
Sbjct: 112 LFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKL 171
Query: 169 FCEMHENGLLLDNFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGK 228
F M ++G+L D+F+ P L+ + GK + VIK+G+ C+ V++S+L +Y K
Sbjct: 172 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 231
Query: 229 CGLCGDAKKVFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSF 288
CG A K F ++ E++++AWNS+++ + QNG + EA+E EM EG+ P VT +
Sbjct: 232 CGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 291
Query: 289 LSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDV 348
+ L GK A+ ++ +E I DV
Sbjct: 292 IGGYNQL-----GKCDAAMDLMQKMETFGITA--------------------------DV 351
Query: 349 VTWNLLVSGYVHNGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSF 408
TW ++SG +HNG+ QALD+ R M + ++VT+ S ++A + + + G E HS
Sbjct: 352 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 411
Query: 409 CVRNNLESDVAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGET 468
V+ DV V +S+VDMY+KCGKLE AR+VFD+ +D+ WN+++ Y + G G+
Sbjct: 412 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 471
Query: 469 LKLFYQMQLEGLPPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLG-VCPTLITWTTLIC 528
+LF +MQ L PN+I+WN++I G + G+ +A D+F M+ G V TW +I
Sbjct: 472 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 531
Query: 529 GLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLV 588
G QNG DEA F+ M+ + PNS++I SLL AC + R IH + R L
Sbjct: 532 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 591
Query: 589 STPVLCSLVNMYAKCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLK 648
V +L + YAK G I ++ +F + K++ +N+LI GY LHG AL+LF ++K
Sbjct: 592 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 651
Query: 649 EECIEPDEITFTSILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNL 708
+ I P+ T +SI+ A G V EG ++F + +++ II +H +V + R + L
Sbjct: 652 TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRL 711
Query: 709 DEALRLILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAY 768
+EAL+ I M + + I+ S L CR H D ++ E L LEP+N+ +S Y
Sbjct: 712 EEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIY 771
Query: 769 AATGMWDEASKVRDLMKERGLRKTPGHSLIQIGNKTHVFFAGDKS 813
A + + ++ L+K G S I++ N H F GD+S
Sbjct: 772 ALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQS 782
BLAST of HG10007982 vs. ExPASy TrEMBL
Match:
A0A0A0LUC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G407170 PE=4 SV=1)
HSP 1 Score: 1518.8 bits (3931), Expect = 0.0e+00
Identity = 757/840 (90.12%), Postives = 796/840 (94.76%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MA+LPFP PTNP+ SLY+ RKPH SPTHFA+ +Q A NVQISYKSYLN ISSLCK+G L
Sbjct: 1 MAALPFPLPTNPIYSLYTPRKPHYSPTHFASFSQIASNVQISYKSYLNHISSLCKQGHLL 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
+A+DLV D+E E+ITIGPDVYGELLQGCVYERALSLGQQIHGRI+KNGE IA NEYIETK
Sbjct: 61 EALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SEIANRLFGKL+VQNEFSWAAIMGLKSR+GFN+EAL+ F EMHE GLLLD
Sbjct: 121 LVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIA KASGAL+WIGFGK+V YV+KMGLGGCIYVA+SLLDMYGKCGLC +AKKVFD
Sbjct: 181 NFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KI EKNIVAWNSMIVNFTQNGLNAEA+ETFYEMRVEGV PTQVT+SSFLSASANLSVIDE
Sbjct: 241 KILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKVGLVE+AELVFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+ALDLC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSI+DMYAKC KLECARRVFD T KRDL+MWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPNVISWNSVILGLLNKG+VD+AKD F+EMQSLG+CP LITWTTLICGLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQSMEEAGIKPNSLSISSLLSAC+TMASLPHGRAIHCYITRHEL VSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAKRVFD ILKKELP+YNA+ISGYALHGQAVEALSLF RLKEECI+PDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
ILSAC HAGLV EGLELFIDMVSNHKI+AQA+HYGCLVSILSR HNLDEALR+ILGMPFE
Sbjct: 661 ILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
LMKER L K PGHSLIQIGNKTHVFFAGDKSHSR KEIYMMLALL VEMQ TRCISVIS
Sbjct: 781 GLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMMLALLRVEMQFTRCISVIS 840
BLAST of HG10007982 vs. ExPASy TrEMBL
Match:
A0A1S3CJ17 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501523 PE=4 SV=1)
HSP 1 Score: 1505.0 bits (3895), Expect = 0.0e+00
Identity = 755/840 (89.88%), Postives = 791/840 (94.17%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MA+LPFP PTNPL SLY+SRK HNS T+FA+LNQ AGNVQISYKSYLNQISSLCK+G L
Sbjct: 1 MAALPFPLPTNPLPSLYTSRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
+A+DLV D+E +ITIGPDVYGELLQGCVYERALSLGQQIHGRI+KNGEYIA NEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SE ANRLF KL+VQNEFSWAAIMGLKSR+ FNEEAL+ F EMHE GL+LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIALKASGAL+WIGFGK+V GYV+KMGLG CIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KIPEKNIVAWNSMIV+FTQNG NAEAIETFYEMRVEGV PTQVT+SSFLSASANL VI E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSI+DMYAKC LECARRVF+ +KRDL+MWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEVDKAKDMF+EMQSLG+CP LITWTTLICGLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQSMEEAGIKPNSLSISSLLSAC+TMASLPHGRAIHCYITR EL VSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAKRVFD ILKKELP+YNA+ISGYALHGQA EALSLF RLKEECI+PDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
ILSACSHAGLV EGLELFIDMVS HKI+AQA+HYGCLVSILSR HNLDEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSFHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLL ACREHPDFELKE LFERLLKLEPDNSGNYVALSNAYAATGMWDEA KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
LMKER LRK PGHSLIQIGNKTHVFFAGDKS+SR KEIYM LALL +EMQSTRCISVIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSNSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of HG10007982 vs. ExPASy TrEMBL
Match:
A0A5A7TJA9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00310 PE=4 SV=1)
HSP 1 Score: 1505.0 bits (3895), Expect = 0.0e+00
Identity = 755/840 (89.88%), Postives = 791/840 (94.17%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MA+LPFP PTNPL SLY+SRK HNS T+FA+LNQ AGNVQISYKSYLNQISSLCK+G L
Sbjct: 1 MAALPFPLPTNPLPSLYTSRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
+A+DLV D+E +ITIGPDVYGELLQGCVYERALSLGQQIHGRI+KNGEYIA NEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SE ANRLF KL+VQNEFSWAAIMGLKSR+ FNEEAL+ F EMHE GL+LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIALKASGAL+WIGFGK+V GYV+KMGLG CIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KIPEKNIVAWNSMIV+FTQNG NAEAIETFYEMRVEGV PTQVT+SSFLSASANL VI E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSI+DMYAKC LECARRVF+ +KRDL+MWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEVDKAKDMF+EMQSLG+CP LITWTTLICGLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQSMEEAGIKPNSLSISSLLSAC+TMASLPHGRAIHCYITR EL VSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAKRVFD ILKKELP+YNA+ISGYALHGQA EALSLF RLKEECI+PDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
ILSACSHAGLV EGLELFIDMVS HKI+AQA+HYGCLVSILSR HNLDEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSFHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLL ACREHPDFELKE LFERLLKLEPDNSGNYVALSNAYAATGMWDEA KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
LMKER LRK PGHSLIQIGNKTHVFFAGDKS+SR KEIYM LALL +EMQSTRCISVIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSNSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of HG10007982 vs. ExPASy TrEMBL
Match:
A0A5D3BG60 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00190 PE=4 SV=1)
HSP 1 Score: 1505.0 bits (3895), Expect = 0.0e+00
Identity = 755/840 (89.88%), Postives = 790/840 (94.05%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MA+LPFP PTNPL SLY+ RK HNS T+FA+LNQ AGNVQISYKSYLNQISSLCK+G L
Sbjct: 1 MAALPFPLPTNPLPSLYTPRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
+A+DLV D+E +ITIGPDVYGELLQGCVYERALSLGQQIHGRI+KNGEYIA NEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SE ANRLF KL+VQNEFSWAAIMGLKSR+ FNEEAL+ F EMHE GL+LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIALKASGAL+WIGFGK+V GYV+KMGLG CIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KIPEKNIVAWNSMIV+FTQNG NAEAIETFYEMRVEGV PTQVT+SSFLSASANL VI E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSI+DMYAKC LECARRVF+ +KRDL+MWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEVDKAKDMF+EMQSLG+CP LITWTTLICGLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQSMEEAGIKPNSLSISSLLSAC+TMASLPHGRAIHCYITR EL VSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAKRVFD ILKKELP+YNA+ISGYALHGQA EALSLF RLKEE I+PDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEEYIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
ILSACSHAGLV EGLELFIDMVSNHKI+AQA+HYGCLVSILSR HNLDEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLL ACREHPDFELKE LFERLLKLEPDNSGNYVALSNAYAATGMWDEA KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
LMKER LRK PGHSLIQIGNKTHVFFAGDKSHSR KEIYM LALL +EMQSTRCISVIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of HG10007982 vs. ExPASy TrEMBL
Match:
A0A6J1EZY3 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441078 PE=4 SV=1)
HSP 1 Score: 1501.5 bits (3886), Expect = 0.0e+00
Identity = 746/840 (88.81%), Postives = 790/840 (94.05%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDLR 60
MASLPF PT PL +LYS+RK NSPTH A LN++AGN QISYKSYLN+ISSLCKEGDLR
Sbjct: 1 MASLPFVTPTYPLATLYSTRKLQNSPTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 QAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYIETK 120
AVDLV++ E + ITIGPDVYGELLQGCVYERALSLGQQIHGRI+KNGE+IA NEYIETK
Sbjct: 61 AAVDLVSNFELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGLLLD 180
LVIFYSKCD+SEIANRLF KLRVQNEFSWAAIMGLK R+GFNEEAL+C CEMHENGL LD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNEFSWAAIMGLKCRIGFNEEALLCCCEMHENGLFLD 180
Query: 181 NFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFV+PIALKA+G+LQWIGFGKA+ GY +KM LGGCI+VASSLLDMYGKCG+CGDAKKVFD
Sbjct: 181 NFVIPIALKAAGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSVIDE 300
KIPEKNIVAWNSMIVNFT NGL EA+ETFY+MRVEGV PTQVT+SSFLSASANLS+I+E
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSK+GLVE+AELVFSEMLEKDVVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAELVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASSIVD YAKCGKLECARRVFD +KRDL+MWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFDLAIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDEAFL 540
PPN+ISWNSVILGLLNKGEV KAKDMFLEMQSLGVCP L+TWTTLI GLAQNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
Query: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYA 600
TFQ M+EAGIKPNSLSIS LLSACT MASL HGRAIH YITR EL +STPVLCSLVNMYA
Sbjct: 541 TFQLMQEAGIKPNSLSISPLLSACTAMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 660
KCGSINQAKR+FD ILKKELPIYNA+ISGYALHGQAVEALSLF RLKEECI+PDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 720
I+SACSHAGLVTEGLELFIDMVSNHKI+AQA+HYGCLVSILSRCHNLDEALRL+L MPFE
Sbjct: 661 IISACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLVLAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPD ELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDAFIFGSLLAACREHPDIELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSRIKEIYMMLALLGVEMQSTRCISVIS 840
DLMKERGLRKTPGHSLIQIGN+THVFFAGDKSHS+ KEIY MLALL +EMQ TRCI V S
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVTS 840
BLAST of HG10007982 vs. TAIR 10
Match:
AT5G55740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 924.9 bits (2389), Expect = 4.8e-269
Identity = 460/838 (54.89%), Postives = 619/838 (73.87%), Query Frame = 0
Query: 1 MASLPFPAPTNPLTSLYSSR---KPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEG 60
MASLPF N + SS+ K H+ H S SY +++SSLCK G
Sbjct: 1 MASLPFNTIPNKVPFSVSSKPSSKHHDEQAH-----------SPSSTSYFHRVSSLCKNG 60
Query: 61 DLRQAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIANNEYI 120
++++A+ LV +M+F N+ IGP++YGE+LQGCVYER LS G+QIH RI+KNG++ A NEYI
Sbjct: 61 EIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYI 120
Query: 121 ETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMHENGL 180
ETKLVIFY+KCD EIA LF KLRV+N FSWAAI+G+K R+G E AL+ F EM EN +
Sbjct: 121 ETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEI 180
Query: 181 LLDNFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCGDAKK 240
DNFVVP KA GAL+W FG+ V GYV+K GL C++VASSL DMYGKCG+ DA K
Sbjct: 181 FPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASK 240
Query: 241 VFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSASANLSV 300
VFD+IP++N VAWN+++V + QNG N EAI F +MR +GV PT+VT+S+ LSASAN+
Sbjct: 241 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 300
Query: 301 IDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDVVTWNLLVSG 360
++EGKQ HA+A+++G+EL NILG+SL+NFY KVGL+E AE+VF M EKDVVTWNL++SG
Sbjct: 301 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 360
Query: 361 YVHNGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESD 420
YV GLV+ A+ +C++M+ E L++D VTLA++M+AAA + NLKLGKE +C+R++ ESD
Sbjct: 361 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 420
Query: 421 VAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKLFYQMQL 480
+ +AS+++DMYAKCG + A++VFD+TV++DL++WNTLLAAYAE G SGE L+LFY MQL
Sbjct: 421 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 480
Query: 481 EGLPPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLGVCPTLITWTTLICGLAQNGLGDE 540
EG+PPNVI+WN +IL LL G+VD+AKDMFL+MQS G+ P LI+WTT++ G+ QNG +E
Sbjct: 481 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 540
Query: 541 AFLTFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITR---HELLVSTPVLCS 600
A L + M+E+G++PN+ SI+ LSAC +ASL GR IH YI R H LVS + S
Sbjct: 541 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS--IETS 600
Query: 601 LVNMYAKCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPD 660
LV+MYAKCG IN+A++VF + L ELP+ NA+IS YAL+G EA++L+ L+ ++PD
Sbjct: 601 LVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPD 660
Query: 661 EITFTSILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLI 720
IT T++LSAC+HAG + + +E+F D+VS + +HYG +V +L+ ++ALRLI
Sbjct: 661 NITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLI 720
Query: 721 LGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWD 780
MPF+PDA + SL+A+C + EL + L +LL+ EP+NSGNYV +SNAYA G WD
Sbjct: 721 EEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWD 780
Query: 781 EASKVRDLMKERGLRKTPGHSLIQIGNK--THVFFAGDKSHSRIKEIYMMLALLGVEM 831
E K+R++MK +GL+K PG S IQI + HVF A DK+H+RI EI MMLALL +M
Sbjct: 781 EVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
BLAST of HG10007982 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 439.5 bits (1129), Expect = 6.1e-123
Identity = 278/876 (31.74%), Postives = 449/876 (51.26%), Query Frame = 0
Query: 1 MASLPFPAP-TNPLTSLYSSRKPHNSPTHFANLNQNAGNVQISYKSYLNQISSLCKEGDL 60
MAS+ P P L SRK + P N N + N + +L +IS+ C+ GDL
Sbjct: 1 MASVLLPLPQVFVLFDYRRSRKESSFPRAVYNSNSISSN-STNANHFLRRISNFCETGDL 60
Query: 61 ----RQAVDLVADMEFEN--ITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIAN 120
R + V D E + + + G LLQ + + +G++IH +++ + N
Sbjct: 61 DKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIH-QLVSGSTRLRN 120
Query: 121 NEYIETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEM- 180
++ + T+++ Y+ C + + +F LR +N F W A++ SR +E L F EM
Sbjct: 121 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 180
Query: 181 HENGLLLDNFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLC 240
LL D+F P +KA + +G G AV G V+K GL ++V ++L+ YG G
Sbjct: 181 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 240
Query: 241 GDAKKVFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVE----GVVPTQVTISSF 300
DA ++FD +PE+N+V+WNSMI F+ NG + E+ EM E +P T+ +
Sbjct: 241 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 300
Query: 301 LSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDV 360
L A I GK H AV L+ +L ++L++ YSK G + NA+++F K+V
Sbjct: 301 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 360
Query: 361 VTWNLLVSGYVHNGLVDQALDLCRVMQS--ENLRFDSVTLASIMAAAADSRNLKLGKEGH 420
V+WN +V G+ G D+ R M + E+++ D VT+ + + L KE H
Sbjct: 361 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 420
Query: 421 SFCVRNNLESDVAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSG 480
+ ++ + VA++ V YAKCG L A+RVF + + WN L+ +A+
Sbjct: 421 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 480
Query: 481 ETLKLFYQMQLEGLPPNVISWNSV---------------ILGLLNKGEVDKAKDMFLEMQ 540
+L QM++ GL P+ + S+ + G + + +++ ++L +
Sbjct: 481 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 540
Query: 541 SLGV-----C-----------PTLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSL 600
SL + C +L++W T+I G QNG D A F+ M GI+ +
Sbjct: 541 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 600
Query: 601 SISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYAKCGSINQAKRVFDTI 660
S+ + AC+ + SL GR H Y +H L + CSL++MYAK GSI Q+ +VF+ +
Sbjct: 601 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 660
Query: 661 LKKELPIYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTSILSACSHAGLVTEGL 720
+K +NA+I GY +HG A EA+ LF ++ PD++TF +L+AC+H+GL+ EGL
Sbjct: 661 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 720
Query: 721 ELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLIL-GMPFEPDAFIFGSLLAACR 780
M S+ + KHY C++ +L R LD+ALR++ M E D I+ SLL++CR
Sbjct: 721 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 780
Query: 781 EHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRDLMKERGLRKTPGH 831
H + E+ E++ +L +LEP+ NYV LSN YA G W++ KVR M E LRK G
Sbjct: 781 IHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 840
BLAST of HG10007982 vs. TAIR 10
Match:
AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 436.0 bits (1120), Expect = 6.7e-122
Identity = 280/883 (31.71%), Postives = 438/883 (49.60%), Query Frame = 0
Query: 42 SYKSYLNQISSLCKEGD-LRQAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQI 101
++ S L+ SS+ K G LR V L + F N + +L C E + G+QI
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPN----KFTFSIVLSTCARETNVEFGRQI 186
Query: 102 HGRIIKNGEYIANNEYIETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLG 161
H +IK G + N Y LV Y+KCD+ A R+F + N W + + G
Sbjct: 187 HCSMIKMG--LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 246
Query: 162 FNEEALVCFCEMHENGLLLDN--FVVPI-------------------------------- 221
EEA++ F M + G D+ FV I
Sbjct: 247 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 306
Query: 222 --------------------------------ALKASGALQWIGFGKAVQGYVIKMGLGG 281
L A G + + G V IK+GL
Sbjct: 307 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 366
Query: 282 CIYVASSLLDMYGKCGLCGDAKKVFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMR 341
IYV SSL+ MY KC A KVF+ + EKN V WN+MI + NG + + +E F +M+
Sbjct: 367 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 426
Query: 342 VEGVVPTQVTISSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVE 401
G T +S LS A ++ G Q H++ + L +G++L++ Y+K G +E
Sbjct: 427 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 486
Query: 402 NAELVFSEMLEKDVVTWNLLVSGYVHNGLVDQALDLCRVMQSENLRFDSVTLASIMAAAA 461
+A +F M ++D VTWN ++ YV + +A DL + M + D LAS + A
Sbjct: 487 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 546
Query: 462 DSRNLKLGKEGHSFCVRNNLESDVAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNT 521
L GK+ H V+ L+ D+ SS++DMY+KCG ++ AR+VF + + +V N
Sbjct: 547 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 606
Query: 522 LLAAYAEQGQSGETLKLFYQMQLEGLPPNVISWNSVI----------LGLLNKGEVDK-- 581
L+A Y+ Q E + LF +M G+ P+ I++ +++ LG G++ K
Sbjct: 607 LIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 666
Query: 582 --AKDMFLEMQSLGV----------C---------PTLITWTTLICGLAQNGLGDEAFLT 641
++ +L + LG+ C +++ WT ++ G +QNG +EA
Sbjct: 667 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 726
Query: 642 FQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYAK 701
++ M G+ P+ + ++L C+ ++SL GRAIH I + +L++MYAK
Sbjct: 727 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 786
Query: 702 CGSINQAKRVFDTILKKELPI-YNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTS 761
CG + + +VFD + ++ + +N+LI+GYA +G A +AL +F +++ I PDEITF
Sbjct: 787 CGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 846
Query: 762 ILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFE 821
+L+ACSHAG V++G ++F M+ + I A+ H C+V +L R L EA I +
Sbjct: 847 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 906
Query: 822 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 824
PDA ++ SLL ACR H D E E+L++LEP NS YV LSN YA+ G W++A+ +R
Sbjct: 907 PDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR 966
BLAST of HG10007982 vs. TAIR 10
Match:
AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 430.3 bits (1105), Expect = 3.7e-120
Identity = 260/803 (32.38%), Postives = 429/803 (53.42%), Query Frame = 0
Query: 54 CKEGDLRQAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNGEYIAN 113
C +G L +A + D+ N + + + +L+ C RA+S G+Q+H RI K
Sbjct: 59 CFDGVLTEAFQRL-DVSENNSPV--EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSF-E 118
Query: 114 NEYIETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVCFCEMH 173
+++ KLV Y KC + A ++F ++ + F+W ++G G AL + M
Sbjct: 119 LDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR 178
Query: 174 ENGLLLDNFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGKCGLCG 233
G+ L P LKA L+ I G + ++K+G ++ ++L+ MY K
Sbjct: 179 VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLS 238
Query: 234 DAKKVFDKIPEK-NIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSFLSAS 293
A+++FD EK + V WNS++ +++ +G + E +E F EM + G P TI S L+A
Sbjct: 239 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 298
Query: 294 ANLSVIDEGKQGHALAVLSGLELTNI-LGSSLINFYSKVGLVENAELVFSEMLEKDVVTW 353
S GK+ HA + S + + + ++LI Y++ G + AE + +M DVVTW
Sbjct: 299 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW 358
Query: 354 NLLVSGYVHNGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVR 413
N L+ GYV N + +AL+ M + + D V++ SI+AA+ NL G E H++ ++
Sbjct: 359 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 418
Query: 414 NNLESDVAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGETLKL 473
+ +S++ V ++++DMY+KC R F +DL+ W T++A YA+ E L+L
Sbjct: 419 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 478
Query: 474 F-----YQMQL-EGLPPNVISWNSVILG----------LLNKGEVD-----KAKDMFLEM 533
F +M++ E + +++ +SV+ +L KG +D + D++ +
Sbjct: 479 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKC 538
Query: 534 QSLGVC---------PTLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLL 593
+++G +++WT++I A NG EA F+ M E G+ +S+++ +L
Sbjct: 539 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 598
Query: 594 SACTTMASLPHGRAIHCYITRHELLVSTPVLCSLVNMYAKCGSINQAKRVFDTILKKELP 653
SA ++++L GR IHCY+ R + + ++V+MYA CG + AK VFD I +K L
Sbjct: 599 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 658
Query: 654 IYNALISGYALHGQAVEALSLFGRLKEECIEPDEITFTSILSACSHAGLVTEGLELFIDM 713
Y ++I+ Y +HG A+ LF +++ E + PD I+F ++L ACSHAGL+ EG M
Sbjct: 659 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 718
Query: 714 VSNHKIIAQAKHYGCLVSILSRCHNLDEALRLILGMPFEPDAFIFGSLLAACREHPDFEL 773
+++ +HY CLV +L R + + EA + M EP A ++ +LLAACR H + E+
Sbjct: 719 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEI 778
Query: 774 KERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRDLMKERGLRKTPGHSLIQIGN 825
E +RLL+LEP N GN V +SN +A G W++ KVR MK G+ K PG S I++
Sbjct: 779 GEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDG 838
BLAST of HG10007982 vs. TAIR 10
Match:
AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 424.9 bits (1091), Expect = 1.5e-118
Identity = 247/765 (32.29%), Postives = 399/765 (52.16%), Query Frame = 0
Query: 49 QISSLCKEGDLRQAVDLVADMEFENITIGPDVYGELLQGCVYERALSLGQQIHGRIIKNG 108
Q LC+ G L +A + + + + Y +LL+ C+ ++ LG+ +H R G
Sbjct: 52 QFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---G 111
Query: 109 EYIANNEYIETKLVIFYSKCDQSEIANRLFGKLRVQNEFSWAAIMGLKSRLGFNEEALVC 168
+ + ++ETKL+ Y+KC A ++F +R +N F+W+A++G SR E
Sbjct: 112 LFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKL 171
Query: 169 FCEMHENGLLLDNFVVPIALKASGALQWIGFGKAVQGYVIKMGLGGCIYVASSLLDMYGK 228
F M ++G+L D+F+ P L+ + GK + VIK+G+ C+ V++S+L +Y K
Sbjct: 172 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 231
Query: 229 CGLCGDAKKVFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTISSF 288
CG A K F ++ E++++AWNS+++ + QNG + EA+E EM EG+ P VT +
Sbjct: 232 CGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 291
Query: 289 LSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDV 348
+ L GK A+ ++ +E I DV
Sbjct: 292 IGGYNQL-----GKCDAAMDLMQKMETFGITA--------------------------DV 351
Query: 349 VTWNLLVSGYVHNGLVDQALDLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSF 408
TW ++SG +HNG+ QALD+ R M + ++VT+ S ++A + + + G E HS
Sbjct: 352 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 411
Query: 409 CVRNNLESDVAVASSIVDMYAKCGKLECARRVFDTTVKRDLVMWNTLLAAYAEQGQSGET 468
V+ DV V +S+VDMY+KCGKLE AR+VFD+ +D+ WN+++ Y + G G+
Sbjct: 412 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 471
Query: 469 LKLFYQMQLEGLPPNVISWNSVILGLLNKGEVDKAKDMFLEMQSLG-VCPTLITWTTLIC 528
+LF +MQ L PN+I+WN++I G + G+ +A D+F M+ G V TW +I
Sbjct: 472 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 531
Query: 529 GLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYITRHELLV 588
G QNG DEA F+ M+ + PNS++I SLL AC + R IH + R L
Sbjct: 532 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 591
Query: 589 STPVLCSLVNMYAKCGSINQAKRVFDTILKKELPIYNALISGYALHGQAVEALSLFGRLK 648
V +L + YAK G I ++ +F + K++ +N+LI GY LHG AL+LF ++K
Sbjct: 592 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 651
Query: 649 EECIEPDEITFTSILSACSHAGLVTEGLELFIDMVSNHKIIAQAKHYGCLVSILSRCHNL 708
+ I P+ T +SI+ A G V EG ++F + +++ II +H +V + R + L
Sbjct: 652 TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRL 711
Query: 709 DEALRLILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAY 768
+EAL+ I M + + I+ S L CR H D ++ E L LEP+N+ +S Y
Sbjct: 712 EEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIY 771
Query: 769 AATGMWDEASKVRDLMKERGLRKTPGHSLIQIGNKTHVFFAGDKS 813
A + + ++ L+K G S I++ N H F GD+S
Sbjct: 772 ALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQS 782
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038880665.1 | 0.0e+00 | 93.33 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa ... | [more] |
XP_011656577.1 | 0.0e+00 | 90.12 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis sa... | [more] |
XP_023531196.1 | 0.0e+00 | 89.52 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita ... | [more] |
TYJ98107.1 | 0.0e+00 | 89.88 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_008463338.1 | 0.0e+00 | 89.88 | PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic ... | [more] |
Match Name | E-value | Identity | Description | |
Q9FM64 | 6.7e-268 | 54.89 | Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidop... | [more] |
Q0WN60 | 8.5e-122 | 31.74 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
Q9SS83 | 9.4e-121 | 31.71 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
Q9M1V3 | 5.2e-119 | 32.38 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
Q9FXH1 | 2.2e-117 | 32.29 | Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LUC4 | 0.0e+00 | 90.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G407170 PE=4 SV=1 | [more] |
A0A1S3CJ17 | 0.0e+00 | 89.88 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucumis ... | [more] |
A0A5A7TJA9 | 0.0e+00 | 89.88 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3BG60 | 0.0e+00 | 89.88 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1EZY3 | 0.0e+00 | 88.81 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT5G55740.1 | 4.8e-269 | 54.89 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G18485.1 | 6.1e-123 | 31.74 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G09040.1 | 6.7e-122 | 31.71 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G63370.1 | 3.7e-120 | 32.38 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G19720.1 | 1.5e-118 | 32.29 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |