HG10023536.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023536.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Nuclear pore complex protein NUP35
Location	Chr05: 35084700 .. 35092975 (+)
Sequence length	1167
RNA-Seq Expression	HG10023536.1
Synteny	HG10023536.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTATTGCCCACTGGAGGATTATGACTCCGACAACGTAATCGCCAAAACCCAAATCCAGATACCCGTGATAGACCTCGACCACATTGGTAAACGCAAATACACCGTCAACAGAATCCGAGAAGCCTTTGAGAAATTGGGATTTTTCCAACTTATTAACCATGGGATTCCGGTGAGCGTTCTCGAAGAAACAAGAAACAAAATTGAAGAAACAATACTATACCCGCAACCTCACTAAGCCATTGATTTACACCAGTAATTTCGATTTGTATTCTGCAGCGACTATCAATTGGAGCGATGCGTGTAGATATGTAAGTGCCCCAAATTTCCATAATTCGCAAGTCCTGCAATTTCAAGTATATCTCCTAAATTTTTACAAAAGAAACTACCCTATTTAAAATAGCCTTTTTTTGTGTAGAGATATTTTGGTGGATTACTCGAAGCGAGTGATGGAAATTGAAAATTTGTTGTTTGAATTGCTATTTGAACAAGGGGATCTATGAAAAGGCAAGGGTCACTTGCCTCCCTCAAACCCTAACGTCGTTTTACATATATATATATATATATATATATATAAATTTTCATTAAATATAAAAAAAAATTAGTTAAACTTAATATGTAATATTCATTCAAACATAAACCAATATCCAAAAAATGGCCTAGTGGCGTGGAGGGGCATCAATTCCTTGCTGCAAAGCGGTAGGTCAGGGTTTAAACAAACCAGAAACATCAACAGCAACCCAATCATCCTCCACAACTTGGGCCACCCACAAGGGATTGTGTGCCACTATTACCCACCATACACACAGCCAAATTTGGCCATCGGCACATTGGAGCACACTAACAATGGCTTCATCACAGTGATATCACTGTGTTCTTGAAGGTAGTAATGCGTTAGATACATCCGAAGACGATGGCAGTAGAAGTAGAGATGTCCACCGGATCGGACGAGGTCGGAAATGGCTTTTTCGTTCCTCATTTCATTCTCCATCTTTGTCAAATTCTCCACAGAGATCGAGGTAGGGATTTTCCAGAAATTTTTGCACGTTTGATTTTTTTAAAAAAATTAATTAAAATAAATCACTCTTGTGGAAAAGTTTTAATTAAATGGTTAACTGATTAGTTTCCCGTGGATAATCAGAATTTAAAAAGAAATTACTTAAAATTTTCAAATTGAAAGAAATAATTATCTATCAAATTATTCATATATATAATATGAATTTATTAGATTATATATACTCTAAGAAATGGAAAATTTTCACATGTCAAACTATTTACATAAAATAGCAAAAAAAATACTGATAGACATTGATAGACTTCTATCACATCTATCAGTGATAGACTTCTATCAGTGTCTATCACAACTATTTAAAAATTTTGATATTTTGTGTAAATAGTTTACCTTATTTTTCTATTTTTAAAACTTCTCCTTGAGAAATCTCATTTTTGTCTACTTTCTGAGAAATCTTAAATTTAATTTCTATGGCTTGTGTTATTGTTGATTTTTTTAAAACATTTTTTTATTATTAATCAACATTTTAATTATAAATCTTGAAAACATATTCTCATATTATATTTTCTTGAATAAAAATTATTATTATTATTACTTAGTTAATTTTGATCAAAAGTGACTTTAAGAGATCAAATTTAAGATCGACTAAAAATACAAGTACCAAAATTGATATATTTGAAAGTAAATTAATTAAAATTGAATAAATCTCAAAGTATAAGGATCAAAATAATATTTCAATAAAAAAATAGAATAAAATTTGACCCAATTTAAAATTTGTTACTTAAAAGTACCACTATTTAATATTTACTAGCCAGAGAACACGTGTGATGCACGTAGCTTAAAATCTTTATAACATGATTTTTTTAATAAATATATATGTTTGTTAAATTTAAATAGTTTAATTTTGGTCCATATACTTTCAAATGTTCAATTATAGTTTCTGTAATTTTGAGAAATCTTAAATTTAATTCCTATTAGTTGTGTTATTGTTAATTTTTTCAGAAACCTTTTTAATTATTTATCATTTTAACTGTAAATTTTGAAAACATATTTTCACATTATATTTTCTTGCATGAAAATTATTATTATTGGTTAGTCAATCCCAATCAAAAGTAACTTTAAGAGATCAAATTTGAACATTTGAAAGTAAATGAACTAAAATTAAATAGACCTCAAAGTATAAAGATCAAAATAAAAATTTAATATATATTATTTTAATAAAAGAAAAAAATAAATGGAAAATGAGAATAAAATTTGACACAATTTAAAACTTGTTACAAAACAAAACTTAAAAGTAACACTATTTAATATTAAAGCAAAATAGTATTTACTAGTTAGAGCACACGTGTTATGCATGTGGTTTAAAATCTTTAGAACATAATATTTTCTCAATAAATATATATTTTTGTTAAATTCAAATAGTAAATATCTAACAATAAGTTTATAAGTGTTGAAAGAGATGTTGACTACGACTATATATATATATATTTATAATGAATATAAAATGTGTTAGATGCAGTTAAAAATATTTAAAGCATAATTTCATAGAGTGAAATATAAAAGGTTAACAAATAAATTTTTTTGTTAATATTAGACATGAAGTTTCAAAATAGTTAAAGAGATAAATTGAAGTAAATTTTCATTTATAATTTTAAATGGTCTTAAGGAAAAGTAAATATAAAATTAAATCGATATTTGTTAAAATATTGTGGAATTTTATAGATTTGACAGCTATCATTCCTCGGTTTTCATTTTTTTCAATAACAAAAATTAACAATTCAAAACAAACAGACTATTATTAAATTCTTTTAAAATTTACATTAATGGCATTTTTTCCTTTTTCAAAATGTTAACTATAAACATTGAATTCAAATGAAAATAGCAAAATAATAGTGAAATATAATTTTAAAATAACATAAACATACCTTAGAAGGAATTTTTAAATTATATTTAGGAAAAAAAATTATTTTTGACTCTAAATTTTAAATAATATAAGCATTTATTTTTAATCCTCAATTTTTAAAGGATAAGTTTAAAAGGTCTATCTACTAAAAATTTCATTAAATTTAAATAAAAAAGTTGACTAGATAGATTAGTGACTGGCTTGATGCCTTGAAAAATTTTATATTTTTAGATATTTATCTATCCTCTCTCCCTCTCCACCTCTCTCTTCTCTCTCTTCTTCTCTCCCCCGTTTCCTACCCTCTCTTCTCTCTTAATCGTAAAGCTTTTCGGTTCCATTCTCGTTCTCTCCAATGGCTATCTAGCAACTCGGACTCAAGCTCACTCTAAACGGCCTCCATCCTCCCCTTCATCTCAACATCCTCATACCCCATATCAAACCCAATTATTAGTTCATCAATCCCAATTAAAACCCCCTAAATTCACCCTGCGTCAGCTATTAATTAACAATCCAAAGTCACCGACCAGGACACCATCAAAATCGGAATCAACAAATCAATCCCCCACCATCTCGCCAAAATTTTAATAAACTACTCCACTCTTCTGTTCAATTCTTCATCTGTCATCTTCTTCAAAAAATAGAAAAAGAAAAAAAAAACCATCTATAATCTTTCAAAACTCATTTTCTTTCAATCCTAATGCCTCTGCTTCATACTTTGCACTTTCTGATCTTTTCCCCATCATTTTCTTGCTCTCCTTTGATATAATTCTCTTGGCTCTCCGGCTTCCTCCGTCGATAAGCAGTCGTCGGAGTCGTCTTCAACGGAAAATCCAATCGTCAACCTTGAACCACAATTTCCAATTTCTCATATGGAGTTTCCTTCTTTTCATCAAATACTACCAATGAAGACCTTTGAAGTTGAAAATGAATTAACTTTGGGTTTGGTAATGAGTAATCTTCATAAAGATGGAAACTTTTGTGTTGGGAGAGAGAAAACACCATAATCAACAGCAATGATGAAGATGAGAGTGATGGAAATGAATAACCAGAAAATGAAGCCGTTGAAGAGAGATGAAAAATAGAGAGTTTTTTGTCTCTCTCCCACGATTAAAAGAGAAGAGAGGGCAGGAGAGGGAGAGGTGAGAGAGAAATATCTAAAAACATAAAATTTTCAAGTTATCAAGCCACATCACCCAGTAACTTTATTGTTTAAATTTAATAAAATATTTAGTAGAAGGATCTTTTAAATCTTTTTTCAAAAACTTGAAGACTAAAATAATCAATTTAAAACATCAGAACCGAACACATTCTTAAAAATTAATCCTATCTCTTTATAGAGTAAAATAAATTCTTAGATTCTCTTATGGACAACAAAAACTTTTAATTTTCATTTATGAGACTTTGAACTCTCTAATAAAATGAAGTATGAGCCAATAAAGTAAAATATATGTATTTATTATGTGAAAATGTGGAAAAAAAGGAAGTGTGTAGTTATTGTACGAAGGAATTTATATTTGTATTGTATAAATGGTTTTAAATTTCAATTTACTAATTCTTTATCAATACAAATTTAAAAAGAGACAAAAACCAAAACATGTTAAGAATAAATTAGAATTGTTGAAATATCTAATGGCATAAGAGAATGTAAAATTAAATGAAAAAAAACATGAAAGCTAAAAAAAAATTGAAAGGACGAAAAATCTAATGATAAAAGATAATGTAAAATTAAATAAAAAAAGAAAAAGAAAAAAAAAAGAAAATGGATGAGTGGTAGGTACAAACCATATAAGGTGTGAGTGTGAAGGTAAAATAGTCTGTATTAAAAAATTAGAAGCAAAAAGGAAATTTTTAAGAAAGTTAAAAATTCTCCACCTGTAGCTCTCTTGATATAATATATAGACAATAGATATAGATATAAATTTAGATAGTATAAATATAAATAAGTATAGAATCTAGACTCCAAATAATATCACGATTCACGAATCACACCGCCAGACCGTATTCTCCACCGCAAGGAGTTGAGGCTTAGGGTTTCAATTTGGGCGTCTCCATTCTAAAATACTTTCGGGAGGGAAAAAAAAATCAAATTCCCAACTCCCCTCGCCTCTCAAATTCTCCACTCCAATCGATCAGTTCGAAGCCAGCTCGACCATTTTCTCAAGGTCATTATCCTAATCTCTCCTCCATTTTCTCATCGCCTTTTCGCAGTTTTTTGAACTCGCATACTGGAATTGCACTCTTTTGTTATTTGAACTTTTTGAGAGAATCAAGGCGGAGAAAGTGGAAGCTATTTTGTAAATTGGTTCTGTTAACTTTCCGAAGCTCAAGCTTGGTTGAGTTAATCTTTCCCGAGTTTTCCCAGCGGCTTTGGATTTTTCGAAATGGTTAATCTGGGGTTTTTTATTTTTCGAGCTAGTCGAACCATATGCGTATTAGCTGATCTGTTGCTTCTTTATTTATTTTAAAGTTCTAGATTGCTTTCTCAGAATTCGTATTAGTGGGGTCTGTTCTGAACCTAGATTGCCCCCGGCATCTGTTAGTTCTTAAATCGGGCCTACTCGTCTGTGATGGTGAAGATTTTATTACCATTTGATGGTCTAGTCTGTTCTGGGGTTGTTTAGCGGTTTAGTCAGAACTTAAACGTTCGTTTTTCAAATTTATTTTGTTGAAGGAAAAACTGATTAGATGTTCGTATGCAGTTGAGATATATTTTTCTTCTAGGTCATGAACACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGGAAATTTTCAACTCCAGGTCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTCACCTTGGAAGACCGCTCGGGCTCAGATTTTTCTCCTGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCTATCCAAAGTCACGACTTCTCTTCGTCGATGAAAAACAAGTCAAATGCCAGCACTTCATACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAGTTGGTGGTCGACATCGAAAGGTGGTGGGAGTGAGCAAGAAGATAAGGGGAAAAGTTCACCAGTTGAAGGTGTGATTCAACCTGGTGCATTAATCACACTTCCAACCCCTAGGGAAGTTGCCAGACCGGAAGTGCAGAGGAATTGCTTGCCTGCAGCAAAACTCAATGAGGAGGAATGGCTTACTGTCTATGGGTGAGTCTCTGTGCCCTTTCGCCCCTCTCATTCATCATCGTTAGCTGAGATTTTTGTTGTGGGTTGAACTTTGAATGATTCATTTACCATCTTAGAGTTGTTATGTCCGATTGATTACAGATTTTTTTCATCTACATGCTAAACAGCCAATCATTTTTCTTTCAAGTCATCTTGGAATTTCCTAAATCACGATGGAGATGATTACATTTGTTTTAGTTGTATATGGTTTATGCATGCAGTCTTGCCTTGCCATTTCTCTTGGATGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCATACACACTCGCACTTCACCCCTAGACATGATAACATGCTCTTGTATTGAGCATCGCTTCATTAATCACTGACATTAAACATCTTCAATTTGGAGGTGTTGTAAGCCTGTCCTTTTACCTTGGCTTCCTTCTTGTTGAAATGAATGAGCATGCTTCAATTTTTTGGCGTGGAAGGAGGTACCCTAGCTGCTTTAGATTTACCTCAGTAGCAGTGCTGTTGGTTTTGATATAAGCAATTAAATTTTTTGTATTTTATATTTGATATGAAGCGATGCTATTATTGATTCCAATGTTCGTTCTTATTTTTATAATTTTGTGCCATCTTTCTTCAGATTCTCCCCGGCTGATACAAATCTTGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACATGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGGTACCATTCTACCTACGTTTACCTGCTCAGTGTTTTAAAAAGCCCTCTTGGGCGTGTGCCTAGGAGCAAGGTGTAGGTCTGGCGCCTCGCCTTGGAAAGATGAGACTAACAAAATAAGGCGCGCCTTAGGCACACGCCTTTTATGAAGCCCCAAGGCTCAAAGCCCTGGACCTTGGGGCTTTTTCATTATTTTTATGAAATAGTATTAATTAAGGGTTTTCCTTCTTTATTAACTAAAAGAATCAAGTTTACTAAGTCTAAACACAAAATTTATTGTGTTTGGGGTCTTTTTTTTTTCCCATATTTCCACTTCAACTGTGCTTTCTCTTTTTAATGTAATATTTTTTTATATAACGCGCCTTATAAAGAAAGCCCGTGCCCTTTTGTGCGCCTAGGCTCCAGAGGTCCATTGTGCCTTGGTGTGCCTTGGGCATTTAAAAACACTGCCTGCTCTATTTGACTATGTTTTTCTCAGTTTGATGTTTTTTTTCTTTTAGACACTTCCAGTCAATCTGTCATTTGAAATCGGAATGGCTTTGTTGTTAGTTGGTAAAATTTGGGGACTTGATAATTATGTATTAATTTTTATGAAAATAATGTGCAACACGTATTGTTGGATGTTAGGGAAGGTATTAGGTTTTAAATCTTTAAGATTATAGTTGTTTTTAGTTGAGCTCTCAAGTTGGCTAATTAGGTTTAAGATTTAATTGACACCTGCTGAGTGTTTTGTTTGAATATTAACCTCATCAAAATATATATGTGTGTGTGTGTAATTTTTATGAAAATAATGTGCAACACGTATTGTTGGATGCTAGGGAAGGTATTAGGTTTTAAATCTTTAAGATTATAGTTGTTTTTAGTTGAGCTCTCAAGTTGGCTAATTAGGTTTAAGATTTAATTGACACCTGCTGAGTATTTTGTTTGAATATTAACCTCATCAAAATGTGTGATGCATATTCAACCTCTTAAAAATACTATTTGCGTTATGAATATGTTGTTTCATTTGTTGCTGGTGCAGAACCGATCTGATGCTCACAGGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCTAATGCACCGGCAGGCACTAGATGAAAAGTTAAACAACCCAGGATTCATGGTTACCCCTCCGGTATCTTCTCGAACCTCAGAACTCCTTGCAATGAGAGGGCCGGCGCGTCCTTACAGTCTTCAAAATGGTAACGGTAGTGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

mRNA sequence

ATGTTTTATTGCCCACTGGAGGATTATGACTCCGACAACGTAATCGCCAAAACCCAAATCCAGATACCCGTGATAGACCTCGACCACATTGGTAAACGCAAATACACCGTCAACAGAATCCGAGAAGCCTTTGAGAAATTGGGATTTTTCCAACTTATTAACCATGGGATTCCGGTCATGAACACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGGAAATTTTCAACTCCAGGTCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTCACCTTGGAAGACCGCTCGGGCTCAGATTTTTCTCCTGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCTATCCAAAGTCACGACTTCTCTTCGTCGATGAAAAACAAGTCAAATGCCAGCACTTCATACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAGTTGGTGGTCGACATCGAAAGGTGGTGGGAGTGAGCAAGAAGATAAGGGGAAAAGTTCACCAGTTGAAGGTGTGATTCAACCTGGTGCATTAATCACACTTCCAACCCCTAGGGAAGTTGCCAGACCGGAAGTGCAGAGGAATTGCTTGCCTGCAGCAAAACTCAATGAGGAGGAATGGCTTACTGTCTATGGATTCTCCCCGGCTGATACAAATCTTGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACATGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCTCACAGGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCTAATGCACCGGCAGGCACTAGATGAAAAGTTAAACAACCCAGGATTCATGGTTACCCCTCCGGTATCTTCTCGAACCTCAGAACTCCTTGCAATGAGAGGGCCGGCGCGTCCTTACAGTCTTCAAAATGGTAACGGTAGTGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

Coding sequence (CDS)

ATGTTTTATTGCCCACTGGAGGATTATGACTCCGACAACGTAATCGCCAAAACCCAAATCCAGATACCCGTGATAGACCTCGACCACATTGGTAAACGCAAATACACCGTCAACAGAATCCGAGAAGCCTTTGAGAAATTGGGATTTTTCCAACTTATTAACCATGGGATTCCGGTCATGAACACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGGAAATTTTCAACTCCAGGTCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTCACCTTGGAAGACCGCTCGGGCTCAGATTTTTCTCCTGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCTATCCAAAGTCACGACTTCTCTTCGTCGATGAAAAACAAGTCAAATGCCAGCACTTCATACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAGTTGGTGGTCGACATCGAAAGGTGGTGGGAGTGAGCAAGAAGATAAGGGGAAAAGTTCACCAGTTGAAGGTGTGATTCAACCTGGTGCATTAATCACACTTCCAACCCCTAGGGAAGTTGCCAGACCGGAAGTGCAGAGGAATTGCTTGCCTGCAGCAAAACTCAATGAGGAGGAATGGCTTACTGTCTATGGATTCTCCCCGGCTGATACAAATCTTGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACATGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCTCACAGGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCTAATGCACCGGCAGGCACTAGATGAAAAGTTAAACAACCCAGGATTCATGGTTACCCCTCCGGTATCTTCTCGAACCTCAGAACTCCTTGCAATGAGAGGGCCGGCGCGTCCTTACAGTCTTCAAAATGGTAACGGTAGTGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

Protein sequence

MFYCPLEDYDSDNVIAKTQIQIPVIDLDHIGKRKYTVNRIREAFEKLGFFQLINHGIPVMNTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLNEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGIQINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNGSARQSGGTIASPSKSLVSKVMDLMFGV

Homology

[Close]

BLAST of HG10023536.1 vs. NCBI nr
Match: XP_038900103.1 (nuclear pore complex protein NUP35 [Benincasa hispida])

HSP 1 Score: 634.0 bits (1634), Expect = 8.3e-178
Identity = 318/330 (96.36%), Postives = 322/330 (97.58%), Query Frame = 0


Query: 60  MNT-VHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 119
           MNT VHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTIVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 120 TLEDRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQS 179
           TLEDRSGSDFSPESGI DYPVSPEIKSDPRTPIQSHDFSS +KNKSNASTSYTPISGQQS
Sbjct: 61  TLEDRSGSDFSPESGIADYPVSPEIKSDPRTPIQSHDFSSPLKNKSNASTSYTPISGQQS 120

Query: 180 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA 239
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA 180

Query: 240 KLNEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK 299
           KLNEEEW+TVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK 240

Query: 300 NGIQINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQN 359
           NGIQINGVLIVGVKPVD MHRQALDEKLN+PGFMVTPPVSSRTSELLA RG  RPY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNHPGFMVTPPVSSRTSELLATRGLVRPYNLQN 300

Query: 360 GNGSARQSGGTIASPSKSLVSKVMDLMFGV 389
           GN SARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSSARQSGGTIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536.1 vs. NCBI nr
Match: KAA0051033.1 (nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa])

HSP 1 Score: 609.8 bits (1571), Expect = 1.7e-170
Identity = 303/327 (92.66%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPI+GQ SRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEKLNNPGFMV PPVSSRTSELLA RGP RPYSLQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQNGNT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536.1 vs. NCBI nr
Match: XP_022151212.1 (nuclear pore complex protein NUP35 [Momordica charantia])

HSP 1 Score: 609.4 bits (1570), Expect = 2.2e-170
Identity = 300/327 (91.74%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DR  SDFSPESGIPDYP+SPEIKSDPRTPIQSHDFSS MKNKSNASTSYTP SGQQSRQG
Sbjct: 64  DR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC PA KLN
Sbjct: 124 SAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAGKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNKNG+
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGV 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEK+NNPGFMV PPV SRT+ELLA RGP R Y+LQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGNS 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           +ARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 304 NARQSGGTIASPSKSLVSKVMDLMFGV 328

[Close]

BLAST of HG10023536.1 vs. NCBI nr
Match: XP_004141656.1 (nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical protein Csa_015598 [Cucumis sativus])

HSP 1 Score: 609.0 bits (1569), Expect = 2.9e-170
Identity = 303/327 (92.66%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPISGQQSRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQAL+E+LNNPGFMV PPVSSRTSELLA RGP RPY+LQNG  
Sbjct: 244 QINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQNGYT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536.1 vs. NCBI nr
Match: XP_008462444.1 (PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo])

HSP 1 Score: 607.1 bits (1564), Expect = 1.1e-169
Identity = 302/327 (92.35%), Postives = 310/327 (94.80%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPI+GQ SRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEKLNNPGFMV PPVSSRTSELLA RGP  PYSLQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQNGNT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536.1 vs. ExPASy Swiss-Prot
Match: O04326 (Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 8.2e-120
Identity = 225/329 (68.39%), Postives = 261/329 (79.33%), Query Frame = 0


Query: 64  HRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR 123
           HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR
Sbjct: 6   HRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMYTLDDR 65

Query: 124 SGSDFSPESGIPDYPVSPEIKSDPRTPIQS--HDFSSSMKNKSNASTSYTPISGQQSRQG 183
             SDFSPESGI DY  SP+ KSD RTP QS   +  +  K K  AS S++ ++ QQS+Q 
Sbjct: 66  --SDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQSQQV 125

Query: 184 SAGFSWWSTSKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKL 243
           S   SWWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +P   L
Sbjct: 126 SGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPTGNL 185

Query: 244 NEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNG 303
           +EEEW+TVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAH+ALNK G
Sbjct: 186 DEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALNKAG 245

Query: 304 IQINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGN 363
           + INGV+IVGVKPVD + +QAL+E+LNN GFM  PP SS  +     R  +RP  LQNG+
Sbjct: 246 MMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTRN---TARPLSRPQYLQNGS 305

Query: 364 G-SARQSGGTIASPSKSLVSKVMDLMFGV 389
             S + SGG +ASPSKS+VSK  DLMFGV
Sbjct: 306 AFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

[Close]

BLAST of HG10023536.1 vs. ExPASy Swiss-Prot
Match: Q8NFH5 (Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.2e-16
Identity = 90/320 (28.12%), Postives = 136/320 (42.50%), Query Frame = 0


Query: 78  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDY 137
           DL +PVT +    S  G +  V  +          P P V   +D+SG+   P   I D 
Sbjct: 42  DLPAPVTPQPRSIS--GPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGA--PPVRSIYDD 101

Query: 138 PVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQGSAGFSWWSTSKGGGSE 197
             SP + S P T           + + N S   +P+ G  S  G+ G S +S +  G   
Sbjct: 102 ISSPGLGSTPLT----------SRRQPNISVMQSPLVGVTSTPGT-GQSMFSPASIG--- 161

Query: 198 QEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLNEEEWLTVYGFSPADTN 257
                   P +  + P  L    T         Q + L +    ++ W+TV+GF  A  +
Sbjct: 162 -------QPRKTTLSPAQLDPFYT---------QGDSLTSEDHLDDSWVTVFGFPQASAS 221

Query: 258 LVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGIQINGVLIVGVKP-VDL 317
            +L +F + G ILKHV      NWMHI YQ++  A +AL+K+G      +++GVKP +D 
Sbjct: 222 YILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDK 281

Query: 318 MHRQALDE-KLNNPGFMVTPPVSS--------RTSELLAMRGPARPYSLQNGNGSARQSG 377
              ++ D   L++P    TPP+ +         T  +  MR  A  Y     +       
Sbjct: 282 SVMESSDRCALSSPSLAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKASTSDYQVISDR 325

Query: 378 GTIASPSKSLVSKVMDLMFG 388
            T     +SLVSK M+ MFG
Sbjct: 342 QT-PKKDESLVSKAMEYMFG 325

[Close]

BLAST of HG10023536.1 vs. ExPASy Swiss-Prot
Match: Q6P6X9 (Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.5e-16
Identity = 95/332 (28.61%), Postives = 139/332 (41.87%), Query Frame = 0


Query: 66  TPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLED 125
           +P  G Q L      DL +PVT +   F   G A   S L          P P V T +D
Sbjct: 17  SPKPGAQFLPGFLMGDLPAPVTPQPRSFGLTGGAEIRSPL----LAGGSPPQPVVPTPKD 76

Query: 126 RSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQGS 185
           +SG+   P   I D      +   P               K   +  +TP+SG Q   G+
Sbjct: 77  KSGA--PPVRSIYDDLNGSAVGMSPLA-----------ARKQPFAGVHTPLSGLQGTPGT 136

Query: 186 AGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLNE 245
               +   S      Q+ K                T  +P +V     Q + L +    +
Sbjct: 137 VSNFFSPVS------QQRK----------------TTLSPAQVDPFFTQGDALSSEDQLD 196

Query: 246 EEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGIQ 305
           + W+TV+GF PA  + +L +F + G ILKHV      NWMH+ YQ++  A +AL+K+G  
Sbjct: 197 DTWITVFGFPPASASYILLQFAQYGNILKHVMS-NTGNWMHVQYQSKLQARKALSKDGKI 256

Query: 306 INGVLIVGVKP-VDLMHRQALDEKLNNPGFMVTPPVS---SRTSELLAMRGPARPYS-LQ 365
               +++GVKP +D    ++LD K +    + TPPV    + +  L   R   RP S   
Sbjct: 257 FGEAIMIGVKPCIDKSVMESLD-KGSTSSSVFTPPVKAPCTPSHPLSTPRSVMRPLSAAY 307

Query: 366 NGNGSARQSGGTIASPSK--SLVSKVMDLMFG 388
             + S  Q      +P K  S VSK M+ MFG
Sbjct: 317 KASSSDYQVVSDQQTPKKDESFVSKAMEYMFG 307

[Close]

BLAST of HG10023536.1 vs. ExPASy Swiss-Prot
Match: Q66IJ0 (Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.5e-15
Identity = 93/339 (27.43%), Postives = 145/339 (42.77%), Query Frame = 0


Query: 67  PNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLE 126
           P++G Q L      D+ +PV        TP Q  ++  +  R    +   PP PV  T +
Sbjct: 24  PSAGAQFLPGFLLGDIPTPV--------TPQQRPSIGVMEMRSPLLSGGSPPQPVVPTHK 83

Query: 127 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFS---SSMKNKSNASTSYTPISGQQS 186
           D+SG+   P   I D   SP + S P  P ++  FS   + +     +S     ISG + 
Sbjct: 84  DKSGA--PPVRSIYDDIASPGLGSTPLNPRKTASFSVLHTPLSGVIPSSPECKNISGSRK 143

Query: 187 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA 246
           R  S+ F   S +  G S +                   T  +P ++     Q + L + 
Sbjct: 144 RPASSVF---SPATIGHSRK-------------------TTLSPAQMDPFYTQGDALTSD 203

Query: 247 KLNEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK 306
              ++ W+TV+GF  A  + +L +F + G I+KHV    + NWMHI YQ++  A +AL+K
Sbjct: 204 DQLDDTWVTVFGFPQASASYILLQFAQYGNIIKHVMS-NNGNWMHIQYQSKLQARKALSK 263

Query: 307 NGIQINGVLIVGVKPVDLMHRQALDEKLNNP--GFMVTPPV--------SSRTSELLAMR 366
           +G      +++GVKP          EK++ P    + TPPV        S  T    +MR
Sbjct: 264 DGRIFGESIMIGVKPCIDKSVMEATEKVSTPTVSSVFTPPVKNIGTPTQSVGTPRAASMR 323

Query: 367 GPARPYSLQNGNGSARQSGGTIASPSKSLVSKVMDLMFG 388
             A  Y           +        +S+VSK M+ MFG
Sbjct: 324 PLAATYKTPASADYQVVADKQAPRKDESIVSKAMEYMFG 329

[Close]

BLAST of HG10023536.1 vs. ExPASy Swiss-Prot
Match: Q68FY1 (Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.2e-15
Identity = 60/206 (29.13%), Postives = 95/206 (46.12%), Query Frame = 0


Query: 205 SPVEGVIQPGALITLPTPREVARPE-------------VQRNCLPAAKLNEEEWLTVYGF 264
           SP+ GV  P    ++ +P  + +P               Q + L +    ++ W+TV+GF
Sbjct: 121 SPLVGVTTPVTGQSMFSPANIGQPRKTTLSPAQLDPFYTQGDSLTSEDHLDDTWVTVFGF 180

Query: 265 SPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGIQINGVLIVGV 324
             A  + +L +F + G ILKHV      NWMHI YQ++  A +AL+K+G      +++GV
Sbjct: 181 PQASASYILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGV 240

Query: 325 KP-VDLMHRQALDE-KLNNPGFMVTPPVSS--------RTSELLAMRGPARPYSLQNGNG 384
           KP +D    +  D   L++P    TPP+ +         T  +  MR  A  Y     + 
Sbjct: 241 KPCIDKNVMENSDRGVLSSPSLAFTPPIRTLGTPTQPGSTPRVSTMRPLATAYKASTSDY 300

Query: 385 SARQSGGTIASPSKSLVSKVMDLMFG 388
                  T     +SLVS+ M+ MFG
Sbjct: 301 QVISDRQT-PKKDESLVSRAMEYMFG 324

[Close]

BLAST of HG10023536.1 vs. ExPASy TrEMBL
Match: A0A5A7U592 (Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00200 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 8.1e-171
Identity = 303/327 (92.66%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPI+GQ SRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEKLNNPGFMV PPVSSRTSELLA RGP RPYSLQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQNGNT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536.1 vs. ExPASy TrEMBL
Match: A0A6J1DCV4 (Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC111019186 PE=3 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.1e-170
Identity = 300/327 (91.74%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DR  SDFSPESGIPDYP+SPEIKSDPRTPIQSHDFSS MKNKSNASTSYTP SGQQSRQG
Sbjct: 64  DR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC PA KLN
Sbjct: 124 SAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAGKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNKNG+
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGV 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEK+NNPGFMV PPV SRT+ELLA RGP R Y+LQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGNS 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           +ARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 304 NARQSGGTIASPSKSLVSKVMDLMFGV 328

[Close]

BLAST of HG10023536.1 vs. ExPASy TrEMBL
Match: A0A0A0K7B2 (Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE=3 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.4e-170
Identity = 303/327 (92.66%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPISGQQSRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQAL+E+LNNPGFMV PPVSSRTSELLA RGP RPY+LQNG  
Sbjct: 244 QINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQNGYT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536.1 vs. ExPASy TrEMBL
Match: A0A1S3CH09 (Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 5.3e-170
Identity = 302/327 (92.35%), Postives = 310/327 (94.80%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPI+GQ SRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEKLNNPGFMV PPVSSRTSELLA RGP  PYSLQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQNGNT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536.1 vs. ExPASy TrEMBL
Match: A0A6J1JYW9 (Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 3.3e-164
Identity = 293/328 (89.33%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRT NSGRQSLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRSGSDFSPESGIPDYPVSPE+KSDP TPIQSHDFSS MK+KSNASTS+TPIS QQSRQ 
Sbjct: 64  DRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISAQQSRQA 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWST KGGGSEQEDKGKSSPVEGVIQPGALITL TPREVARPEVQRNCLPA KLN
Sbjct: 124 SAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAGKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILY+NRS AH+AL+KNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QING+LIVGVKPVD + RQ LDEKLNNPGFMV PPVSSRT+EL    GP RPY+ QNGN 
Sbjct: 244 QINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNFQNGNS 303

Query: 362 SARQSGG-TIASPSKSLVSKVMDLMFGV 389
            ARQSGG TIASPSKSLVSKVMDLMFGV
Sbjct: 304 YARQSGGTTIASPSKSLVSKVMDLMFGV 331

[Close]

BLAST of HG10023536.1 vs. TAIR 10
Match: AT3G16310.1 (mitotic phosphoprotein N' end (MPPN) family protein )

HSP 1 Score: 431.8 bits (1109), Expect = 5.8e-121
Identity = 225/329 (68.39%), Postives = 261/329 (79.33%), Query Frame = 0


Query: 64  HRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR 123
           HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR
Sbjct: 6   HRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMYTLDDR 65

Query: 124 SGSDFSPESGIPDYPVSPEIKSDPRTPIQS--HDFSSSMKNKSNASTSYTPISGQQSRQG 183
             SDFSPESGI DY  SP+ KSD RTP QS   +  +  K K  AS S++ ++ QQS+Q 
Sbjct: 66  --SDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQSQQV 125

Query: 184 SAGFSWWSTSKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKL 243
           S   SWWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +P   L
Sbjct: 126 SGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPTGNL 185

Query: 244 NEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNG 303
           +EEEW+TVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAH+ALNK G
Sbjct: 186 DEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALNKAG 245

Query: 304 IQINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGN 363
           + INGV+IVGVKPVD + +QAL+E+LNN GFM  PP SS  +     R  +RP  LQNG+
Sbjct: 246 MMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTRN---TARPLSRPQYLQNGS 305

Query: 364 G-SARQSGGTIASPSKSLVSKVMDLMFGV 389
             S + SGG +ASPSKS+VSK  DLMFGV
Sbjct: 306 AFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

[Close]

BLAST of HG10023536.1 vs. TAIR 10
Match: AT1G06620.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-06
Identity = 39/131 (29.77%), Postives = 58/131 (44.27%), Query Frame = 0


Query: 1   MFYCPLEDYDSDNVIAKTQIQIPVIDLDHIG----KRKYTVNRIREAFEKLGFFQLINHG 60
           +F  P     S    + +   IP IDL   G     R+  V +I +A EK GFFQ+INHG
Sbjct: 41  IFRAPPATLTSPKPPSSSDFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHG 100

Query: 61  IPV---------MNTVHRTPNSGRQSLFYQDLASPV--TTRKGKFSTPGQAAAVSALWRE 117
           IP+         +   H      ++  + +D AS +  ++    FS+P      +A WR+
Sbjct: 101 IPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSP------AANWRD 160

[Close]

BLAST of HG10023536.1 vs. TAIR 10
Match: AT2G30840.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.1e-05
Identity = 39/124 (31.45%), Postives = 58/124 (46.77%), Query Frame = 0


Query: 10  DSDNVIAKTQIQIPVIDLDHIGKRKYTVNR------IREAFEKLGFFQLINHGI--PVMN 69
           DS+ +++ T + IP IDL      +YTV R      IR+A E+ GFFQ+INHGI   VM 
Sbjct: 45  DSNLLLSSTTMVIPTIDLKGGVFDEYTVTRESVIAMIRDAVERFGFFQVINHGISNDVME 104

Query: 70  TV-------HRTPNSGRQSLFYQDLASPV--TTRKGKFSTPGQAAAVSALWRENFGNSDL 117
            +       H   +  R+  + +D+   V   +    +S+P      SA WR+       
Sbjct: 105 KMKDGIRGFHEQDSDVRKKFYTRDVTKTVKYNSNFDLYSSP------SANWRDTLSCFMA 162

[Close]

BLAST of HG10023536.1 vs. TAIR 10
Match: AT2G30830.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 35/125 (28.00%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 7   EDYDSDNVIAKTQIQIPVIDL-----DHIGKRKYTVNRIREAFEKLGFFQLINHGIP--V 66
           +D    N    + ++IP ID+     +    RK  + ++R A EK GFFQ+INHGIP  V
Sbjct: 39  QDVAVTNPKPSSTLEIPTIDVGGGVFESTVTRKSVIAKVRAAVEKFGFFQVINHGIPLEV 98

Query: 67  MNTV-------HRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQA-AAVSALWRENFGNSD 117
           M ++       H   +  +++ + +D+     T+K K++T     ++ +A WR+      
Sbjct: 99  MESMKDGIRGFHEQDSEVKKTFYSRDI-----TKKVKYNTNFDLYSSQAANWRDTLTMVM 158

[Close]

BLAST of HG10023536.1 vs. TAIR 10
Match: AT5G59540.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 29/112 (25.89%), Postives = 50/112 (44.64%), Query Frame = 0


Query: 18  TQIQIPVIDLDHI----GKRKYTVNRIREAFEKLGFFQLINHGIPV---------MNTVH 77
           + ++IP+ID   +      R+  V +++ A E  GFFQ+INH IP+         +   H
Sbjct: 57  SDLEIPIIDFASVHADTASREAIVEKVKYAVENWGFFQVINHSIPLNVLEEIKDGVRRFH 116

Query: 78  RTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPP 117
                 ++S F +D  +        F     + +V+  WR++F     P PP
Sbjct: 117 EEDPEVKKSFFSRDAGNKKFVYNSNFDLYSSSPSVN--WRDSFSCYIAPDPP 166

The following BLAST results are available for this feature:

BLAST of HG10023536.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900103.1	8.3e-178	96.36	nuclear pore complex protein NUP35 [Benincasa hispida]	[more]
KAA0051033.1	1.7e-170	92.66	nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclea...	[more]
XP_022151212.1	2.2e-170	91.74	nuclear pore complex protein NUP35 [Momordica charantia]	[more]
XP_004141656.1	2.9e-170	92.66	nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical pr...	[more]
XP_008462444.1	1.1e-169	92.35	PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]	[more]

BLAST of HG10023536.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04326	8.2e-120	68.39	Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1...	[more]
Q8NFH5	2.2e-16	28.13	Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1	[more]
Q6P6X9	8.5e-16	28.61	Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1	[more]
Q66IJ0	5.5e-15	27.43	Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1	[more]
Q68FY1	7.2e-15	29.13	Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1	[more]

BLAST of HG10023536.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U592	8.1e-171	92.66	Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1DCV4	1.1e-170	91.74	Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC11101918...	[more]
A0A0A0K7B2	1.4e-170	92.66	Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE...	[more]
A0A1S3CH09	5.3e-170	92.35	Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 ...	[more]
A0A6J1JYW9	3.3e-164	89.33	Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 P...	[more]

BLAST of HG10023536.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16310.1	5.8e-121	68.39	mitotic phosphoprotein N' end (MPPN) family protein	[more]
AT1G06620.1	1.6e-06	29.77	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT2G30840.1	3.1e-05	31.45	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT2G30830.1	4.0e-05	28.00	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT5G59540.1	4.0e-05	25.89	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027443	Isopenicillin N synthase-like superfamily	GENE3D	2.60.120.330		coord: 1..122 e-value: 4.1E-10 score: 41.7
IPR007846	RNA-recognition motif (RRM) Nup35-type domain	PFAM	PF05172	Nup35_RRM	coord: 240..324 e-value: 1.1E-24 score: 86.3
IPR007846	RNA-recognition motif (RRM) Nup35-type domain	PROSITE	PS51472	RRM_NUP35	coord: 240..321 score: 31.450451
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 241..314 e-value: 1.7E-26 score: 94.0
IPR026992	Non-haem dioxygenase N-terminal domain	PFAM	PF14226	DIOX_N	coord: 22..59 e-value: 5.4E-8 score: 33.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..208
None	No IPR available	CDD	cd12441	RRM_Nup53_like	coord: 243..315 e-value: 1.02829E-35 score: 123.491
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 18..59
IPR017389	Nucleoporin, NUP53	PANTHER	PTHR21527	NUCLEOPORIN NUP35	coord: 60..388
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 243..314

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10023536	HG10023536	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10023536.1-cds	HG10023536.1-cds-Chr05:35084700..35084873	CDS
HG10023536.1-cds	HG10023536.1-cds-Chr05:35090338..35090912	CDS
HG10023536.1-cds	HG10023536.1-cds-Chr05:35091540..35091651	CDS
HG10023536.1-cds	HG10023536.1-cds-Chr05:35092670..35092975	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10023536.1	HG10023536.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0006607	NLS-bearing protein import into nucleus
biological_process	GO:0006999	nuclear pore organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0031965	nuclear membrane
cellular_component	GO:0044613	nuclear pore central transport channel
cellular_component	GO:0044615	nuclear pore nuclear basket
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0017056	structural constituent of nuclear pore
molecular_function	GO:0005543	phospholipid binding
molecular_function	GO:0003697	single-stranded DNA binding