HG10023536 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023536
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Nuclear pore complex protein NUP35
Location	Chr05: 35084700 .. 35092975 (+)
RNA-Seq Expression	HG10023536
Synteny	HG10023536

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTATTGCCCACTGGAGGATTATGACTCCGACAACGTAATCGCCAAAACCCAAATCCAGATACCCGTGATAGACCTCGACCACATTGGTAAACGCAAATACACCGTCAACAGAATCCGAGAAGCCTTTGAGAAATTGGGATTTTTCCAACTTATTAACCATGGGATTCCGGTGAGCGTTCTCGAAGAAACAAGAAACAAAATTGAAGAAACAATACTATACCCGCAACCTCACTAAGCCATTGATTTACACCAGTAATTTCGATTTGTATTCTGCAGCGACTATCAATTGGAGCGATGCGTGTAGATATGTAAGTGCCCCAAATTTCCATAATTCGCAAGTCCTGCAATTTCAAGTATATCTCCTAAATTTTTACAAAAGAAACTACCCTATTTAAAATAGCCTTTTTTTGTGTAGAGATATTTTGGTGGATTACTCGAAGCGAGTGATGGAAATTGAAAATTTGTTGTTTGAATTGCTATTTGAACAAGGGGATCTATGAAAAGGCAAGGGTCACTTGCCTCCCTCAAACCCTAACGTCGTTTTACATATATATATATATATATATATATATAAATTTTCATTAAATATAAAAAAAAATTAGTTAAACTTAATATGTAATATTCATTCAAACATAAACCAATATCCAAAAAATGGCCTAGTGGCGTGGAGGGGCATCAATTCCTTGCTGCAAAGCGGTAGGTCAGGGTTTAAACAAACCAGAAACATCAACAGCAACCCAATCATCCTCCACAACTTGGGCCACCCACAAGGGATTGTGTGCCACTATTACCCACCATACACACAGCCAAATTTGGCCATCGGCACATTGGAGCACACTAACAATGGCTTCATCACAGTGATATCACTGTGTTCTTGAAGGTAGTAATGCGTTAGATACATCCGAAGACGATGGCAGTAGAAGTAGAGATGTCCACCGGATCGGACGAGGTCGGAAATGGCTTTTTCGTTCCTCATTTCATTCTCCATCTTTGTCAAATTCTCCACAGAGATCGAGGTAGGGATTTTCCAGAAATTTTTGCACGTTTGATTTTTTTAAAAAAATTAATTAAAATAAATCACTCTTGTGGAAAAGTTTTAATTAAATGGTTAACTGATTAGTTTCCCGTGGATAATCAGAATTTAAAAAGAAATTACTTAAAATTTTCAAATTGAAAGAAATAATTATCTATCAAATTATTCATATATATAATATGAATTTATTAGATTATATATACTCTAAGAAATGGAAAATTTTCACATGTCAAACTATTTACATAAAATAGCAAAAAAAATACTGATAGACATTGATAGACTTCTATCACATCTATCAGTGATAGACTTCTATCAGTGTCTATCACAACTATTTAAAAATTTTGATATTTTGTGTAAATAGTTTACCTTATTTTTCTATTTTTAAAACTTCTCCTTGAGAAATCTCATTTTTGTCTACTTTCTGAGAAATCTTAAATTTAATTTCTATGGCTTGTGTTATTGTTGATTTTTTTAAAACATTTTTTTATTATTAATCAACATTTTAATTATAAATCTTGAAAACATATTCTCATATTATATTTTCTTGAATAAAAATTATTATTATTATTACTTAGTTAATTTTGATCAAAAGTGACTTTAAGAGATCAAATTTAAGATCGACTAAAAATACAAGTACCAAAATTGATATATTTGAAAGTAAATTAATTAAAATTGAATAAATCTCAAAGTATAAGGATCAAAATAATATTTCAATAAAAAAATAGAATAAAATTTGACCCAATTTAAAATTTGTTACTTAAAAGTACCACTATTTAATATTTACTAGCCAGAGAACACGTGTGATGCACGTAGCTTAAAATCTTTATAACATGATTTTTTTAATAAATATATATGTTTGTTAAATTTAAATAGTTTAATTTTGGTCCATATACTTTCAAATGTTCAATTATAGTTTCTGTAATTTTGAGAAATCTTAAATTTAATTCCTATTAGTTGTGTTATTGTTAATTTTTTCAGAAACCTTTTTAATTATTTATCATTTTAACTGTAAATTTTGAAAACATATTTTCACATTATATTTTCTTGCATGAAAATTATTATTATTGGTTAGTCAATCCCAATCAAAAGTAACTTTAAGAGATCAAATTTGAACATTTGAAAGTAAATGAACTAAAATTAAATAGACCTCAAAGTATAAAGATCAAAATAAAAATTTAATATATATTATTTTAATAAAAGAAAAAAATAAATGGAAAATGAGAATAAAATTTGACACAATTTAAAACTTGTTACAAAACAAAACTTAAAAGTAACACTATTTAATATTAAAGCAAAATAGTATTTACTAGTTAGAGCACACGTGTTATGCATGTGGTTTAAAATCTTTAGAACATAATATTTTCTCAATAAATATATATTTTTGTTAAATTCAAATAGTAAATATCTAACAATAAGTTTATAAGTGTTGAAAGAGATGTTGACTACGACTATATATATATATATTTATAATGAATATAAAATGTGTTAGATGCAGTTAAAAATATTTAAAGCATAATTTCATAGAGTGAAATATAAAAGGTTAACAAATAAATTTTTTTGTTAATATTAGACATGAAGTTTCAAAATAGTTAAAGAGATAAATTGAAGTAAATTTTCATTTATAATTTTAAATGGTCTTAAGGAAAAGTAAATATAAAATTAAATCGATATTTGTTAAAATATTGTGGAATTTTATAGATTTGACAGCTATCATTCCTCGGTTTTCATTTTTTTCAATAACAAAAATTAACAATTCAAAACAAACAGACTATTATTAAATTCTTTTAAAATTTACATTAATGGCATTTTTTCCTTTTTCAAAATGTTAACTATAAACATTGAATTCAAATGAAAATAGCAAAATAATAGTGAAATATAATTTTAAAATAACATAAACATACCTTAGAAGGAATTTTTAAATTATATTTAGGAAAAAAAATTATTTTTGACTCTAAATTTTAAATAATATAAGCATTTATTTTTAATCCTCAATTTTTAAAGGATAAGTTTAAAAGGTCTATCTACTAAAAATTTCATTAAATTTAAATAAAAAAGTTGACTAGATAGATTAGTGACTGGCTTGATGCCTTGAAAAATTTTATATTTTTAGATATTTATCTATCCTCTCTCCCTCTCCACCTCTCTCTTCTCTCTCTTCTTCTCTCCCCCGTTTCCTACCCTCTCTTCTCTCTTAATCGTAAAGCTTTTCGGTTCCATTCTCGTTCTCTCCAATGGCTATCTAGCAACTCGGACTCAAGCTCACTCTAAACGGCCTCCATCCTCCCCTTCATCTCAACATCCTCATACCCCATATCAAACCCAATTATTAGTTCATCAATCCCAATTAAAACCCCCTAAATTCACCCTGCGTCAGCTATTAATTAACAATCCAAAGTCACCGACCAGGACACCATCAAAATCGGAATCAACAAATCAATCCCCCACCATCTCGCCAAAATTTTAATAAACTACTCCACTCTTCTGTTCAATTCTTCATCTGTCATCTTCTTCAAAAAATAGAAAAAGAAAAAAAAAACCATCTATAATCTTTCAAAACTCATTTTCTTTCAATCCTAATGCCTCTGCTTCATACTTTGCACTTTCTGATCTTTTCCCCATCATTTTCTTGCTCTCCTTTGATATAATTCTCTTGGCTCTCCGGCTTCCTCCGTCGATAAGCAGTCGTCGGAGTCGTCTTCAACGGAAAATCCAATCGTCAACCTTGAACCACAATTTCCAATTTCTCATATGGAGTTTCCTTCTTTTCATCAAATACTACCAATGAAGACCTTTGAAGTTGAAAATGAATTAACTTTGGGTTTGGTAATGAGTAATCTTCATAAAGATGGAAACTTTTGTGTTGGGAGAGAGAAAACACCATAATCAACAGCAATGATGAAGATGAGAGTGATGGAAATGAATAACCAGAAAATGAAGCCGTTGAAGAGAGATGAAAAATAGAGAGTTTTTTGTCTCTCTCCCACGATTAAAAGAGAAGAGAGGGCAGGAGAGGGAGAGGTGAGAGAGAAATATCTAAAAACATAAAATTTTCAAGTTATCAAGCCACATCACCCAGTAACTTTATTGTTTAAATTTAATAAAATATTTAGTAGAAGGATCTTTTAAATCTTTTTTCAAAAACTTGAAGACTAAAATAATCAATTTAAAACATCAGAACCGAACACATTCTTAAAAATTAATCCTATCTCTTTATAGAGTAAAATAAATTCTTAGATTCTCTTATGGACAACAAAAACTTTTAATTTTCATTTATGAGACTTTGAACTCTCTAATAAAATGAAGTATGAGCCAATAAAGTAAAATATATGTATTTATTATGTGAAAATGTGGAAAAAAAGGAAGTGTGTAGTTATTGTACGAAGGAATTTATATTTGTATTGTATAAATGGTTTTAAATTTCAATTTACTAATTCTTTATCAATACAAATTTAAAAAGAGACAAAAACCAAAACATGTTAAGAATAAATTAGAATTGTTGAAATATCTAATGGCATAAGAGAATGTAAAATTAAATGAAAAAAAACATGAAAGCTAAAAAAAAATTGAAAGGACGAAAAATCTAATGATAAAAGATAATGTAAAATTAAATAAAAAAAGAAAAAGAAAAAAAAAAGAAAATGGATGAGTGGTAGGTACAAACCATATAAGGTGTGAGTGTGAAGGTAAAATAGTCTGTATTAAAAAATTAGAAGCAAAAAGGAAATTTTTAAGAAAGTTAAAAATTCTCCACCTGTAGCTCTCTTGATATAATATATAGACAATAGATATAGATATAAATTTAGATAGTATAAATATAAATAAGTATAGAATCTAGACTCCAAATAATATCACGATTCACGAATCACACCGCCAGACCGTATTCTCCACCGCAAGGAGTTGAGGCTTAGGGTTTCAATTTGGGCGTCTCCATTCTAAAATACTTTCGGGAGGGAAAAAAAAATCAAATTCCCAACTCCCCTCGCCTCTCAAATTCTCCACTCCAATCGATCAGTTCGAAGCCAGCTCGACCATTTTCTCAAGGTCATTATCCTAATCTCTCCTCCATTTTCTCATCGCCTTTTCGCAGTTTTTTGAACTCGCATACTGGAATTGCACTCTTTTGTTATTTGAACTTTTTGAGAGAATCAAGGCGGAGAAAGTGGAAGCTATTTTGTAAATTGGTTCTGTTAACTTTCCGAAGCTCAAGCTTGGTTGAGTTAATCTTTCCCGAGTTTTCCCAGCGGCTTTGGATTTTTCGAAATGGTTAATCTGGGGTTTTTTATTTTTCGAGCTAGTCGAACCATATGCGTATTAGCTGATCTGTTGCTTCTTTATTTATTTTAAAGTTCTAGATTGCTTTCTCAGAATTCGTATTAGTGGGGTCTGTTCTGAACCTAGATTGCCCCCGGCATCTGTTAGTTCTTAAATCGGGCCTACTCGTCTGTGATGGTGAAGATTTTATTACCATTTGATGGTCTAGTCTGTTCTGGGGTTGTTTAGCGGTTTAGTCAGAACTTAAACGTTCGTTTTTCAAATTTATTTTGTTGAAGGAAAAACTGATTAGATGTTCGTATGCAGTTGAGATATATTTTTCTTCTAGGTCATGAACACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGGAAATTTTCAACTCCAGGTCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTCACCTTGGAAGACCGCTCGGGCTCAGATTTTTCTCCTGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCTATCCAAAGTCACGACTTCTCTTCGTCGATGAAAAACAAGTCAAATGCCAGCACTTCATACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAGTTGGTGGTCGACATCGAAAGGTGGTGGGAGTGAGCAAGAAGATAAGGGGAAAAGTTCACCAGTTGAAGGTGTGATTCAACCTGGTGCATTAATCACACTTCCAACCCCTAGGGAAGTTGCCAGACCGGAAGTGCAGAGGAATTGCTTGCCTGCAGCAAAACTCAATGAGGAGGAATGGCTTACTGTCTATGGGTGAGTCTCTGTGCCCTTTCGCCCCTCTCATTCATCATCGTTAGCTGAGATTTTTGTTGTGGGTTGAACTTTGAATGATTCATTTACCATCTTAGAGTTGTTATGTCCGATTGATTACAGATTTTTTTCATCTACATGCTAAACAGCCAATCATTTTTCTTTCAAGTCATCTTGGAATTTCCTAAATCACGATGGAGATGATTACATTTGTTTTAGTTGTATATGGTTTATGCATGCAGTCTTGCCTTGCCATTTCTCTTGGATGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCATACACACTCGCACTTCACCCCTAGACATGATAACATGCTCTTGTATTGAGCATCGCTTCATTAATCACTGACATTAAACATCTTCAATTTGGAGGTGTTGTAAGCCTGTCCTTTTACCTTGGCTTCCTTCTTGTTGAAATGAATGAGCATGCTTCAATTTTTTGGCGTGGAAGGAGGTACCCTAGCTGCTTTAGATTTACCTCAGTAGCAGTGCTGTTGGTTTTGATATAAGCAATTAAATTTTTTGTATTTTATATTTGATATGAAGCGATGCTATTATTGATTCCAATGTTCGTTCTTATTTTTATAATTTTGTGCCATCTTTCTTCAGATTCTCCCCGGCTGATACAAATCTTGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACATGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGGTACCATTCTACCTACGTTTACCTGCTCAGTGTTTTAAAAAGCCCTCTTGGGCGTGTGCCTAGGAGCAAGGTGTAGGTCTGGCGCCTCGCCTTGGAAAGATGAGACTAACAAAATAAGGCGCGCCTTAGGCACACGCCTTTTATGAAGCCCCAAGGCTCAAAGCCCTGGACCTTGGGGCTTTTTCATTATTTTTATGAAATAGTATTAATTAAGGGTTTTCCTTCTTTATTAACTAAAAGAATCAAGTTTACTAAGTCTAAACACAAAATTTATTGTGTTTGGGGTCTTTTTTTTTTCCCATATTTCCACTTCAACTGTGCTTTCTCTTTTTAATGTAATATTTTTTTATATAACGCGCCTTATAAAGAAAGCCCGTGCCCTTTTGTGCGCCTAGGCTCCAGAGGTCCATTGTGCCTTGGTGTGCCTTGGGCATTTAAAAACACTGCCTGCTCTATTTGACTATGTTTTTCTCAGTTTGATGTTTTTTTTCTTTTAGACACTTCCAGTCAATCTGTCATTTGAAATCGGAATGGCTTTGTTGTTAGTTGGTAAAATTTGGGGACTTGATAATTATGTATTAATTTTTATGAAAATAATGTGCAACACGTATTGTTGGATGTTAGGGAAGGTATTAGGTTTTAAATCTTTAAGATTATAGTTGTTTTTAGTTGAGCTCTCAAGTTGGCTAATTAGGTTTAAGATTTAATTGACACCTGCTGAGTGTTTTGTTTGAATATTAACCTCATCAAAATATATATGTGTGTGTGTGTAATTTTTATGAAAATAATGTGCAACACGTATTGTTGGATGCTAGGGAAGGTATTAGGTTTTAAATCTTTAAGATTATAGTTGTTTTTAGTTGAGCTCTCAAGTTGGCTAATTAGGTTTAAGATTTAATTGACACCTGCTGAGTATTTTGTTTGAATATTAACCTCATCAAAATGTGTGATGCATATTCAACCTCTTAAAAATACTATTTGCGTTATGAATATGTTGTTTCATTTGTTGCTGGTGCAGAACCGATCTGATGCTCACAGGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCTAATGCACCGGCAGGCACTAGATGAAAAGTTAAACAACCCAGGATTCATGGTTACCCCTCCGGTATCTTCTCGAACCTCAGAACTCCTTGCAATGAGAGGGCCGGCGCGTCCTTACAGTCTTCAAAATGGTAACGGTAGTGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

mRNA sequence

ATGTTTTATTGCCCACTGGAGGATTATGACTCCGACAACGTAATCGCCAAAACCCAAATCCAGATACCCGTGATAGACCTCGACCACATTGGTAAACGCAAATACACCGTCAACAGAATCCGAGAAGCCTTTGAGAAATTGGGATTTTTCCAACTTATTAACCATGGGATTCCGGTCATGAACACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGGAAATTTTCAACTCCAGGTCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTCACCTTGGAAGACCGCTCGGGCTCAGATTTTTCTCCTGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCTATCCAAAGTCACGACTTCTCTTCGTCGATGAAAAACAAGTCAAATGCCAGCACTTCATACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAGTTGGTGGTCGACATCGAAAGGTGGTGGGAGTGAGCAAGAAGATAAGGGGAAAAGTTCACCAGTTGAAGGTGTGATTCAACCTGGTGCATTAATCACACTTCCAACCCCTAGGGAAGTTGCCAGACCGGAAGTGCAGAGGAATTGCTTGCCTGCAGCAAAACTCAATGAGGAGGAATGGCTTACTGTCTATGGATTCTCCCCGGCTGATACAAATCTTGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACATGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCTCACAGGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCTAATGCACCGGCAGGCACTAGATGAAAAGTTAAACAACCCAGGATTCATGGTTACCCCTCCGGTATCTTCTCGAACCTCAGAACTCCTTGCAATGAGAGGGCCGGCGCGTCCTTACAGTCTTCAAAATGGTAACGGTAGTGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

Coding sequence (CDS)

ATGTTTTATTGCCCACTGGAGGATTATGACTCCGACAACGTAATCGCCAAAACCCAAATCCAGATACCCGTGATAGACCTCGACCACATTGGTAAACGCAAATACACCGTCAACAGAATCCGAGAAGCCTTTGAGAAATTGGGATTTTTCCAACTTATTAACCATGGGATTCCGGTCATGAACACTGTGCATAGAACTCCCAATTCTGGGAGGCAGTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACGCGGAAAGGGAAATTTTCAACTCCAGGTCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTCACCTTGGAAGACCGCTCGGGCTCAGATTTTTCTCCTGAGTCTGGGATTCCTGATTATCCTGTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCTATCCAAAGTCACGACTTCTCTTCGTCGATGAAAAACAAGTCAAATGCCAGCACTTCATACACACCAATTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGCTTTAGTTGGTGGTCGACATCGAAAGGTGGTGGGAGTGAGCAAGAAGATAAGGGGAAAAGTTCACCAGTTGAAGGTGTGATTCAACCTGGTGCATTAATCACACTTCCAACCCCTAGGGAAGTTGCCAGACCGGAAGTGCAGAGGAATTGCTTGCCTGCAGCAAAACTCAATGAGGAGGAATGGCTTACTGTCTATGGATTCTCCCCGGCTGATACAAATCTTGTTTTGAGGGAATTTGAAAAATGCGGTGAGATCTTGAAACATGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCTCACAGGGCTCTCAACAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCTAATGCACCGGCAGGCACTAGATGAAAAGTTAAACAACCCAGGATTCATGGTTACCCCTCCGGTATCTTCTCGAACCTCAGAACTCCTTGCAATGAGAGGGCCGGCGCGTCCTTACAGTCTTCAAAATGGTAACGGTAGTGCACGGCAGTCAGGAGGTACCATTGCTTCACCATCGAAATCATTAGTATCTAAGGTCATGGATTTGATGTTTGGAGTCTAA

Protein sequence

MFYCPLEDYDSDNVIAKTQIQIPVIDLDHIGKRKYTVNRIREAFEKLGFFQLINHGIPVMNTVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLNEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGIQINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNGSARQSGGTIASPSKSLVSKVMDLMFGV

Homology

[Close]

BLAST of HG10023536 vs. NCBI nr
Match: XP_038900103.1 (nuclear pore complex protein NUP35 [Benincasa hispida])

HSP 1 Score: 634.0 bits (1634), Expect = 8.3e-178
Identity = 318/330 (96.36%), Postives = 322/330 (97.58%), Query Frame = 0


Query: 60  MNT-VHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 119
           MNT VHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTIVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 120 TLEDRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQS 179
           TLEDRSGSDFSPESGI DYPVSPEIKSDPRTPIQSHDFSS +KNKSNASTSYTPISGQQS
Sbjct: 61  TLEDRSGSDFSPESGIADYPVSPEIKSDPRTPIQSHDFSSPLKNKSNASTSYTPISGQQS 120

Query: 180 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA 239
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA 180

Query: 240 KLNEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK 299
           KLNEEEW+TVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK 240

Query: 300 NGIQINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQN 359
           NGIQINGVLIVGVKPVD MHRQALDEKLN+PGFMVTPPVSSRTSELLA RG  RPY+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNHPGFMVTPPVSSRTSELLATRGLVRPYNLQN 300

Query: 360 GNGSARQSGGTIASPSKSLVSKVMDLMFGV 389
           GN SARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSSARQSGGTIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536 vs. NCBI nr
Match: KAA0051033.1 (nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa])

HSP 1 Score: 609.8 bits (1571), Expect = 1.7e-170
Identity = 303/327 (92.66%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPI+GQ SRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEKLNNPGFMV PPVSSRTSELLA RGP RPYSLQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQNGNT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536 vs. NCBI nr
Match: XP_022151212.1 (nuclear pore complex protein NUP35 [Momordica charantia])

HSP 1 Score: 609.4 bits (1570), Expect = 2.2e-170
Identity = 300/327 (91.74%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DR  SDFSPESGIPDYP+SPEIKSDPRTPIQSHDFSS MKNKSNASTSYTP SGQQSRQG
Sbjct: 64  DR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC PA KLN
Sbjct: 124 SAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAGKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNKNG+
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGV 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEK+NNPGFMV PPV SRT+ELLA RGP R Y+LQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGNS 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           +ARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 304 NARQSGGTIASPSKSLVSKVMDLMFGV 328

[Close]

BLAST of HG10023536 vs. NCBI nr
Match: XP_004141656.1 (nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical protein Csa_015598 [Cucumis sativus])

HSP 1 Score: 609.0 bits (1569), Expect = 2.9e-170
Identity = 303/327 (92.66%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPISGQQSRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQAL+E+LNNPGFMV PPVSSRTSELLA RGP RPY+LQNG  
Sbjct: 244 QINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQNGYT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536 vs. NCBI nr
Match: XP_008462444.1 (PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo])

HSP 1 Score: 607.1 bits (1564), Expect = 1.1e-169
Identity = 302/327 (92.35%), Postives = 310/327 (94.80%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPI+GQ SRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEKLNNPGFMV PPVSSRTSELLA RGP  PYSLQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQNGNT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536 vs. ExPASy Swiss-Prot
Match: O04326 (Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 8.2e-120
Identity = 225/329 (68.39%), Postives = 261/329 (79.33%), Query Frame = 0


Query: 64  HRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR 123
           HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR
Sbjct: 6   HRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMYTLDDR 65

Query: 124 SGSDFSPESGIPDYPVSPEIKSDPRTPIQS--HDFSSSMKNKSNASTSYTPISGQQSRQG 183
             SDFSPESGI DY  SP+ KSD RTP QS   +  +  K K  AS S++ ++ QQS+Q 
Sbjct: 66  --SDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQSQQV 125

Query: 184 SAGFSWWSTSKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKL 243
           S   SWWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +P   L
Sbjct: 126 SGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPTGNL 185

Query: 244 NEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNG 303
           +EEEW+TVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAH+ALNK G
Sbjct: 186 DEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALNKAG 245

Query: 304 IQINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGN 363
           + INGV+IVGVKPVD + +QAL+E+LNN GFM  PP SS  +     R  +RP  LQNG+
Sbjct: 246 MMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTRN---TARPLSRPQYLQNGS 305

Query: 364 G-SARQSGGTIASPSKSLVSKVMDLMFGV 389
             S + SGG +ASPSKS+VSK  DLMFGV
Sbjct: 306 AFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

[Close]

BLAST of HG10023536 vs. ExPASy Swiss-Prot
Match: Q8NFH5 (Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.2e-16
Identity = 90/320 (28.12%), Postives = 136/320 (42.50%), Query Frame = 0


Query: 78  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPESGIPDY 137
           DL +PVT +    S  G +  V  +          P P V   +D+SG+   P   I D 
Sbjct: 42  DLPAPVTPQPRSIS--GPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGA--PPVRSIYDD 101

Query: 138 PVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQGSAGFSWWSTSKGGGSE 197
             SP + S P T           + + N S   +P+ G  S  G+ G S +S +  G   
Sbjct: 102 ISSPGLGSTPLT----------SRRQPNISVMQSPLVGVTSTPGT-GQSMFSPASIG--- 161

Query: 198 QEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLNEEEWLTVYGFSPADTN 257
                   P +  + P  L    T         Q + L +    ++ W+TV+GF  A  +
Sbjct: 162 -------QPRKTTLSPAQLDPFYT---------QGDSLTSEDHLDDSWVTVFGFPQASAS 221

Query: 258 LVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGIQINGVLIVGVKP-VDL 317
            +L +F + G ILKHV      NWMHI YQ++  A +AL+K+G      +++GVKP +D 
Sbjct: 222 YILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDK 281

Query: 318 MHRQALDE-KLNNPGFMVTPPVSS--------RTSELLAMRGPARPYSLQNGNGSARQSG 377
              ++ D   L++P    TPP+ +         T  +  MR  A  Y     +       
Sbjct: 282 SVMESSDRCALSSPSLAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKASTSDYQVISDR 325

Query: 378 GTIASPSKSLVSKVMDLMFG 388
            T     +SLVSK M+ MFG
Sbjct: 342 QT-PKKDESLVSKAMEYMFG 325

[Close]

BLAST of HG10023536 vs. ExPASy Swiss-Prot
Match: Q6P6X9 (Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.5e-16
Identity = 95/332 (28.61%), Postives = 139/332 (41.87%), Query Frame = 0


Query: 66  TPNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLED 125
           +P  G Q L      DL +PVT +   F   G A   S L          P P V T +D
Sbjct: 17  SPKPGAQFLPGFLMGDLPAPVTPQPRSFGLTGGAEIRSPL----LAGGSPPQPVVPTPKD 76

Query: 126 RSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQGS 185
           +SG+   P   I D      +   P               K   +  +TP+SG Q   G+
Sbjct: 77  KSGA--PPVRSIYDDLNGSAVGMSPLA-----------ARKQPFAGVHTPLSGLQGTPGT 136

Query: 186 AGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLNE 245
               +   S      Q+ K                T  +P +V     Q + L +    +
Sbjct: 137 VSNFFSPVS------QQRK----------------TTLSPAQVDPFFTQGDALSSEDQLD 196

Query: 246 EEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGIQ 305
           + W+TV+GF PA  + +L +F + G ILKHV      NWMH+ YQ++  A +AL+K+G  
Sbjct: 197 DTWITVFGFPPASASYILLQFAQYGNILKHVMS-NTGNWMHVQYQSKLQARKALSKDGKI 256

Query: 306 INGVLIVGVKP-VDLMHRQALDEKLNNPGFMVTPPVS---SRTSELLAMRGPARPYS-LQ 365
               +++GVKP +D    ++LD K +    + TPPV    + +  L   R   RP S   
Sbjct: 257 FGEAIMIGVKPCIDKSVMESLD-KGSTSSSVFTPPVKAPCTPSHPLSTPRSVMRPLSAAY 307

Query: 366 NGNGSARQSGGTIASPSK--SLVSKVMDLMFG 388
             + S  Q      +P K  S VSK M+ MFG
Sbjct: 317 KASSSDYQVVSDQQTPKKDESFVSKAMEYMFG 307

[Close]

BLAST of HG10023536 vs. ExPASy Swiss-Prot
Match: Q66IJ0 (Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.5e-15
Identity = 93/339 (27.43%), Postives = 145/339 (42.77%), Query Frame = 0


Query: 67  PNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLE 126
           P++G Q L      D+ +PV        TP Q  ++  +  R    +   PP PV  T +
Sbjct: 24  PSAGAQFLPGFLLGDIPTPV--------TPQQRPSIGVMEMRSPLLSGGSPPQPVVPTHK 83

Query: 127 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFS---SSMKNKSNASTSYTPISGQQS 186
           D+SG+   P   I D   SP + S P  P ++  FS   + +     +S     ISG + 
Sbjct: 84  DKSGA--PPVRSIYDDIASPGLGSTPLNPRKTASFSVLHTPLSGVIPSSPECKNISGSRK 143

Query: 187 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA 246
           R  S+ F   S +  G S +                   T  +P ++     Q + L + 
Sbjct: 144 RPASSVF---SPATIGHSRK-------------------TTLSPAQMDPFYTQGDALTSD 203

Query: 247 KLNEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK 306
              ++ W+TV+GF  A  + +L +F + G I+KHV    + NWMHI YQ++  A +AL+K
Sbjct: 204 DQLDDTWVTVFGFPQASASYILLQFAQYGNIIKHVMS-NNGNWMHIQYQSKLQARKALSK 263

Query: 307 NGIQINGVLIVGVKPVDLMHRQALDEKLNNP--GFMVTPPV--------SSRTSELLAMR 366
           +G      +++GVKP          EK++ P    + TPPV        S  T    +MR
Sbjct: 264 DGRIFGESIMIGVKPCIDKSVMEATEKVSTPTVSSVFTPPVKNIGTPTQSVGTPRAASMR 323

Query: 367 GPARPYSLQNGNGSARQSGGTIASPSKSLVSKVMDLMFG 388
             A  Y           +        +S+VSK M+ MFG
Sbjct: 324 PLAATYKTPASADYQVVADKQAPRKDESIVSKAMEYMFG 329

[Close]

BLAST of HG10023536 vs. ExPASy Swiss-Prot
Match: Q68FY1 (Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.2e-15
Identity = 60/206 (29.13%), Postives = 95/206 (46.12%), Query Frame = 0


Query: 205 SPVEGVIQPGALITLPTPREVARPE-------------VQRNCLPAAKLNEEEWLTVYGF 264
           SP+ GV  P    ++ +P  + +P               Q + L +    ++ W+TV+GF
Sbjct: 121 SPLVGVTTPVTGQSMFSPANIGQPRKTTLSPAQLDPFYTQGDSLTSEDHLDDTWVTVFGF 180

Query: 265 SPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGIQINGVLIVGV 324
             A  + +L +F + G ILKHV      NWMHI YQ++  A +AL+K+G      +++GV
Sbjct: 181 PQASASYILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGV 240

Query: 325 KP-VDLMHRQALDE-KLNNPGFMVTPPVSS--------RTSELLAMRGPARPYSLQNGNG 384
           KP +D    +  D   L++P    TPP+ +         T  +  MR  A  Y     + 
Sbjct: 241 KPCIDKNVMENSDRGVLSSPSLAFTPPIRTLGTPTQPGSTPRVSTMRPLATAYKASTSDY 300

Query: 385 SARQSGGTIASPSKSLVSKVMDLMFG 388
                  T     +SLVS+ M+ MFG
Sbjct: 301 QVISDRQT-PKKDESLVSRAMEYMFG 324

[Close]

BLAST of HG10023536 vs. ExPASy TrEMBL
Match: A0A5A7U592 (Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00200 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 8.1e-171
Identity = 303/327 (92.66%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPI+GQ SRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEKLNNPGFMV PPVSSRTSELLA RGP RPYSLQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQNGNT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536 vs. ExPASy TrEMBL
Match: A0A6J1DCV4 (Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC111019186 PE=3 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.1e-170
Identity = 300/327 (91.74%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           T+HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DR  SDFSPESGIPDYP+SPEIKSDPRTPIQSHDFSS MKNKSNASTSYTP SGQQSRQG
Sbjct: 64  DR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEVQRNC PA KLN
Sbjct: 124 SAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAGKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNKNG+
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGV 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEK+NNPGFMV PPV SRT+ELLA RGP R Y+LQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGNS 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           +ARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 304 NARQSGGTIASPSKSLVSKVMDLMFGV 328

[Close]

BLAST of HG10023536 vs. ExPASy TrEMBL
Match: A0A0A0K7B2 (Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE=3 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.4e-170
Identity = 303/327 (92.66%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPISGQQSRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQAL+E+LNNPGFMV PPVSSRTSELLA RGP RPY+LQNG  
Sbjct: 244 QINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQNGYT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536 vs. ExPASy TrEMBL
Match: A0A1S3CH09 (Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 5.3e-170
Identity = 302/327 (92.35%), Postives = 310/327 (94.80%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRS SDFSPESGIPDYPVSPE KSDPRTPI+ HDFSS  KNKSNASTSYTPI+GQ SRQG
Sbjct: 64  DRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPSRQG 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP AKLN
Sbjct: 124 SAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QINGVLIVGVKPVD MHRQALDEKLNNPGFMV PPVSSRTSELLA RGP  PYSLQNGN 
Sbjct: 244 QINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQNGNT 303

Query: 362 SARQSGGTIASPSKSLVSKVMDLMFGV 389
           SAR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 304 SARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of HG10023536 vs. ExPASy TrEMBL
Match: A0A6J1JYW9 (Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 3.3e-164
Identity = 293/328 (89.33%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 62  TVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 121
           TVHRT NSGRQSLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE
Sbjct: 4   TVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLE 63

Query: 122 DRSGSDFSPESGIPDYPVSPEIKSDPRTPIQSHDFSSSMKNKSNASTSYTPISGQQSRQG 181
           DRSGSDFSPESGIPDYPVSPE+KSDP TPIQSHDFSS MK+KSNASTS+TPIS QQSRQ 
Sbjct: 64  DRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISAQQSRQA 123

Query: 182 SAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKLN 241
           SAGFSWWST KGGGSEQEDKGKSSPVEGVIQPGALITL TPREVARPEVQRNCLPA KLN
Sbjct: 124 SAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAGKLN 183

Query: 242 EEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNGI 301
           EEEW+TVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILY+NRS AH+AL+KNGI
Sbjct: 184 EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSKNGI 243

Query: 302 QINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGNG 361
           QING+LIVGVKPVD + RQ LDEKLNNPGFMV PPVSSRT+EL    GP RPY+ QNGN 
Sbjct: 244 QINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNFQNGNS 303

Query: 362 SARQSGG-TIASPSKSLVSKVMDLMFGV 389
            ARQSGG TIASPSKSLVSKVMDLMFGV
Sbjct: 304 YARQSGGTTIASPSKSLVSKVMDLMFGV 331

[Close]

BLAST of HG10023536 vs. TAIR 10
Match: AT3G16310.1 (mitotic phosphoprotein N' end (MPPN) family protein )

HSP 1 Score: 431.8 bits (1109), Expect = 5.8e-121
Identity = 225/329 (68.39%), Postives = 261/329 (79.33%), Query Frame = 0


Query: 64  HRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR 123
           HRTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR
Sbjct: 6   HRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMYTLDDR 65

Query: 124 SGSDFSPESGIPDYPVSPEIKSDPRTPIQS--HDFSSSMKNKSNASTSYTPISGQQSRQG 183
             SDFSPESGI DY  SP+ KSD RTP QS   +  +  K K  AS S++ ++ QQS+Q 
Sbjct: 66  --SDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQSQQV 125

Query: 184 SAGFSWWSTSKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAAKL 243
           S   SWWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEVQR  +P   L
Sbjct: 126 SGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPTGNL 185

Query: 244 NEEEWLTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNKNG 303
           +EEEW+TVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAH+ALNK G
Sbjct: 186 DEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALNKAG 245

Query: 304 IQINGVLIVGVKPVDLMHRQALDEKLNNPGFMVTPPVSSRTSELLAMRGPARPYSLQNGN 363
           + INGV+IVGVKPVD + +QAL+E+LNN GFM  PP SS  +     R  +RP  LQNG+
Sbjct: 246 MMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPPPSSTRN---TARPLSRPQYLQNGS 305

Query: 364 G-SARQSGGTIASPSKSLVSKVMDLMFGV 389
             S + SGG +ASPSKS+VSK  DLMFGV
Sbjct: 306 AFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

[Close]

BLAST of HG10023536 vs. TAIR 10
Match: AT1G06620.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-06
Identity = 39/131 (29.77%), Postives = 58/131 (44.27%), Query Frame = 0


Query: 1   MFYCPLEDYDSDNVIAKTQIQIPVIDLDHIG----KRKYTVNRIREAFEKLGFFQLINHG 60
           +F  P     S    + +   IP IDL   G     R+  V +I +A EK GFFQ+INHG
Sbjct: 41  IFRAPPATLTSPKPPSSSDFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHG 100

Query: 61  IPV---------MNTVHRTPNSGRQSLFYQDLASPV--TTRKGKFSTPGQAAAVSALWRE 117
           IP+         +   H      ++  + +D AS +  ++    FS+P      +A WR+
Sbjct: 101 IPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSP------AANWRD 160

[Close]

BLAST of HG10023536 vs. TAIR 10
Match: AT2G30840.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.1e-05
Identity = 39/124 (31.45%), Postives = 58/124 (46.77%), Query Frame = 0


Query: 10  DSDNVIAKTQIQIPVIDLDHIGKRKYTVNR------IREAFEKLGFFQLINHGI--PVMN 69
           DS+ +++ T + IP IDL      +YTV R      IR+A E+ GFFQ+INHGI   VM 
Sbjct: 45  DSNLLLSSTTMVIPTIDLKGGVFDEYTVTRESVIAMIRDAVERFGFFQVINHGISNDVME 104

Query: 70  TV-------HRTPNSGRQSLFYQDLASPV--TTRKGKFSTPGQAAAVSALWRENFGNSDL 117
            +       H   +  R+  + +D+   V   +    +S+P      SA WR+       
Sbjct: 105 KMKDGIRGFHEQDSDVRKKFYTRDVTKTVKYNSNFDLYSSP------SANWRDTLSCFMA 162

[Close]

BLAST of HG10023536 vs. TAIR 10
Match: AT2G30830.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 35/125 (28.00%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 7   EDYDSDNVIAKTQIQIPVIDL-----DHIGKRKYTVNRIREAFEKLGFFQLINHGIP--V 66
           +D    N    + ++IP ID+     +    RK  + ++R A EK GFFQ+INHGIP  V
Sbjct: 39  QDVAVTNPKPSSTLEIPTIDVGGGVFESTVTRKSVIAKVRAAVEKFGFFQVINHGIPLEV 98

Query: 67  MNTV-------HRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQA-AAVSALWRENFGNSD 117
           M ++       H   +  +++ + +D+     T+K K++T     ++ +A WR+      
Sbjct: 99  MESMKDGIRGFHEQDSEVKKTFYSRDI-----TKKVKYNTNFDLYSSQAANWRDTLTMVM 158

[Close]

BLAST of HG10023536 vs. TAIR 10
Match: AT5G59540.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 29/112 (25.89%), Postives = 50/112 (44.64%), Query Frame = 0


Query: 18  TQIQIPVIDLDHI----GKRKYTVNRIREAFEKLGFFQLINHGIPV---------MNTVH 77
           + ++IP+ID   +      R+  V +++ A E  GFFQ+INH IP+         +   H
Sbjct: 57  SDLEIPIIDFASVHADTASREAIVEKVKYAVENWGFFQVINHSIPLNVLEEIKDGVRRFH 116

Query: 78  RTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPP 117
                 ++S F +D  +        F     + +V+  WR++F     P PP
Sbjct: 117 EEDPEVKKSFFSRDAGNKKFVYNSNFDLYSSSPSVN--WRDSFSCYIAPDPP 166

The following BLAST results are available for this feature:

BLAST of HG10023536 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900103.1	8.3e-178	96.36	nuclear pore complex protein NUP35 [Benincasa hispida]	[more]
KAA0051033.1	1.7e-170	92.66	nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclea...	[more]
XP_022151212.1	2.2e-170	91.74	nuclear pore complex protein NUP35 [Momordica charantia]	[more]
XP_004141656.1	2.9e-170	92.66	nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical pr...	[more]
XP_008462444.1	1.1e-169	92.35	PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]	[more]

BLAST of HG10023536 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04326	8.2e-120	68.39	Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1...	[more]
Q8NFH5	2.2e-16	28.13	Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1	[more]
Q6P6X9	8.5e-16	28.61	Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1	[more]
Q66IJ0	5.5e-15	27.43	Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1	[more]
Q68FY1	7.2e-15	29.13	Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1	[more]

BLAST of HG10023536 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U592	8.1e-171	92.66	Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1DCV4	1.1e-170	91.74	Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC11101918...	[more]
A0A0A0K7B2	1.4e-170	92.66	Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE...	[more]
A0A1S3CH09	5.3e-170	92.35	Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 ...	[more]
A0A6J1JYW9	3.3e-164	89.33	Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 P...	[more]

BLAST of HG10023536 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16310.1	5.8e-121	68.39	mitotic phosphoprotein N' end (MPPN) family protein	[more]
AT1G06620.1	1.6e-06	29.77	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT2G30840.1	3.1e-05	31.45	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT2G30830.1	4.0e-05	28.00	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT5G59540.1	4.0e-05	25.89	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027443	Isopenicillin N synthase-like superfamily	GENE3D	2.60.120.330		coord: 1..122 e-value: 4.1E-10 score: 41.7
IPR007846	RNA-recognition motif (RRM) Nup35-type domain	PFAM	PF05172	Nup35_RRM	coord: 240..324 e-value: 1.1E-24 score: 86.3
IPR007846	RNA-recognition motif (RRM) Nup35-type domain	PROSITE	PS51472	RRM_NUP35	coord: 240..321 score: 31.450451
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 241..314 e-value: 1.7E-26 score: 94.0
IPR026992	Non-haem dioxygenase N-terminal domain	PFAM	PF14226	DIOX_N	coord: 22..59 e-value: 5.4E-8 score: 33.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..208
None	No IPR available	CDD	cd12441	RRM_Nup53_like	coord: 243..315 e-value: 1.02829E-35 score: 123.491
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 18..59
IPR017389	Nucleoporin, NUP53	PANTHER	PTHR21527	NUCLEOPORIN NUP35	coord: 60..388
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 243..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023536.1	HG10023536.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051028	mRNA transport
biological_process	GO:0006607	NLS-bearing protein import into nucleus
biological_process	GO:0006999	nuclear pore organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0031965	nuclear membrane
cellular_component	GO:0044613	nuclear pore central transport channel
cellular_component	GO:0044615	nuclear pore nuclear basket
molecular_function	GO:0005543	phospholipid binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0017056	structural constituent of nuclear pore
molecular_function	GO:0003676	nucleic acid binding