HG10014613 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACATCGAACATGAAACTCAACTTCAACAGCGAATGCGACCTGCGACAAAGACGGAGCAGACGATGGTGAGGAGAAACCGACGACCAACGACAACTGAGAGAGAAAAGCGTGAATGCAGAAAACGACGACTTGAGGGAGAGATGCGATTATGCGAATGAAATTGATAGAAGAGTTGTGGAACCCTAATAGCATTTAAGGTGGGTTGATCGAACCGACGAACCAAACCAAATCATATCGATTTGGTTTGGTTTGGTTTTGGTTGAACTTAAACAGAAACCTTAATCCAACTGAACCAGTTTGAACCAATTCGATTCGATTTGCCGGTTTGGTTCAATTTTTTTCACTCACATTAAATGTTTTTTTTAGAAAAATGAGCAAAACTATTTACAATATAGAAAAATTTCACTGTCTATGCGATAGACTTTGATAGCTTGAACTTGCAGTCTTTGGTCGCTTGAACGATAGGCTGCAAGTCTATCTTGGTCTATCGCATAGACTTTTAGAAGTCTATCGCGGTTTAAGTGAGATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAATAATTTTCCTATCAATTTCTTCTTTTTTGGGAAATGGTTAGAAATAATCCCAAAAGGTTTTTAATCTTTCAAAATTAGCACCCTTTTTAGCAATTCGTTATAATAGTTTTTCTAGATCCTAAGATTCGAATAAAAATGTAATATTTTTTTTTTTGTGATTTTATTTTGCTTTCTTGGTGGAATCTCGGTTGGGAATATATGTAATCTTTTCCAAATGTTACGTAATCTTTTTAATATTCTTCAAATCCCATATTCATAATCCAATTTAGTACACCTACCATTCCAATTAGAGATTCTAAATTTCCAAAACTTCAATATCTCGACAGCTTCAACAACCTCAATGCAATCTTCAATTTTTCAAAAAATTTGTAATTATTCGGATCAAGAATTGAAGCAGATAGAAACAAAGCAATCTAATAGCACCAGTGCATATATAATATTGATGCAATTGGGTTATGGGTAGGGAATGATGCAATTTCTCTATTCATAAACAACCAAGAAGAATGATGCAATTTCAACATGTAATATTGATTCTCTTGGCCAATCTCGATTTTTGTTTTGACCAAAGATCTAAAAAAATTGATGGTTTGGATGTGAGTAGAAAAGATTTAAATTTTAATTTGAATCTCAAGATCGATCACGACCAGGAAAGACTTAGAAAACTATTATAAGGAATTACAAACAAAAAAGTGCTAATTATGAAATTGGACATTATTTAAAATTTTCCTAGATTTAATTGCACAACCAACCTATTTTAAAGGCAAAAAATGACAAATGACCCCGTTTTTTAAAAAATGTCAAATGACAGTTTGTTAATGTAACGAACAAGGAAAGTTACAAATTTGCCCTTTCTTTTATCCTCTTTCCTTCTTGGCACGATTTTCTTCTTCTTCTCATGCGAAATTCTACGGCTCCGATATGATTTTGTTCTTCTCCGACGAAGCTCTCCTTCTCCACGACCCTGGCTCTGATCAATGATACAGGACCAGCTTCGCCTTGTAGCTTCGACCTACGATGTACGAGAGAACAAAAGAGAGCAAAAGCTTCTCTTGAGACCCTGCAGCTCTGACCAATGCTGCGGGACCAAAGTGAGAAAGAGAGAGAGAGGACGTGATCTGACGAAGAGAGAGTAAATGATGAAAGGAAGCGAGAGCCAGACTTTTTCGCATGGATGAGTTCATTTTAGTAATTTCACCTCAACTTGACTTTAGAAGGTAAAAAAAAACTTGTTTTAAAAAGGGGAGGTAAACTATTTACACAAAATAACAAAATTTTTAAATAGTTGTGATAGACACTGATAGAAATCTATCAGGATCTATCCGTAATAGAAATGATAGACGTCTATCACCTGATAAAAGTTTATCCATATCTATCCGTATTGTTTTTTTGCTATTTTATGTAAATGGTTTGACATTTTTTTTATTTGTGAAAATTTTCCTTTTAAAAAAGCAAGCAATTTTTCATCTCTCCCCCATTTTTTGTAATCAAACCGCCGGACCCAATTTCTCCATAAGTTTAATCTATCAAATAATCCCAAACTCCAGTGTCATTTTCTCTTTGCCTCATCCTCACGGCGTCGACCCCCTCCCCTCTCTCTGCTTAGTTTTTCCCCGGCGGTGACCAGACTGCAAAGACCCACGAATCAGCGGTGGTTGGACGGTTCCGGCGTTACCCACGAAATCCAATCCAAGTGACTGTGTACTCTTCGTGGGTGAACTCTTGGACGCGCGTCTACTTCTGCAACGATGTCTGGCGGCACGTGCGAATGCTACACCAGCAGCGGTTACCGGCGACTCCGTGAGCACGACATTCAACTTCTGTTGTAGATGACCTTGCGTGCCACGGCGGTGTGGTTCTCAACGGTGGCGCGATCAAAGACCTATGAACTAGCGGTGATGTTGACATTGGAGTAAGTTTTCGGTGGTTATCCACACTCCGATTTTCATTAAATCGGATTACCCACTACGTGTAAAGTTCAGATCTACAAGTTTAGAAACTTTCGGACAGACACCGGTGAAGATCGAAGCCTTATTGGTTAGGTTCACGAGGTATTAACGTGTTTTGAACCCTTTCCGACTCGATTAAATTATCTAATATCAGTCTTTAATATGTAGAACTAGCATTGGACTAATGCAGAATGGTCGATTAAGGTCTGTTGATTTTTGGTAAAAATATCTCTCATGAACACTCTCTCCGTTTGGATTAAGGTTTCGGACTATAAACAATGTCTTTATTCTTTAGCCTTGTATTAATGATGTTTGTTATGGATTCTATTTTGGATTAATTTCTGTAGGTTTTTGATCGAGGTAATTACTTTTCACAAATGTCTGAAAGTATCTTTGTATGATTTGAAATTGAATGAAATTGTTTGTATTGAAGTGTTTTGATCGATTTCAAATTGAAATAAATCTGTTTTGGTTTTGTTACTTTTGAAAAAGTATTATAAAGTTTGTATTTACTGATTTGATGTGTTTTTATGAAAAATTATACTTGAAACTATGTGTTTTGTTTTGAATGTCTTTGAAAGAATTTTGAACTTTTTTCTTTTTTTTGGGGGGGGGGGGGGATTGTTTGCTTATTATGCAGTAGCCAGACAGTAAATTTTTTAAATTTATTTGTGGGAAGACACCTTATAATGGTTTGGCATTCTTTTGGAATGAAGATTTAGGTGTGCGTTGCACTTGTATGGCCCCACATAGTAATTGCATTGAATGTTCCTTAGAACTCAAGAATATAGTTGTAAAGTAAGGTCGTTGCATTGAATGTTCTCTAATCGACATATTGGATTGAATGAATGGTTGATTGGTGTTACTGTTGGGTAACCACATATGTCTTGGCTACTCTAATTATGCATCTTTCTCACTATGATAAATGAAAGTTCTGTTCGATTGAAAGTTGAAAGTTCTGTTTTATGAAAAGTATCGATTGATGGAAAGTTCTATTCAAAATCCATTTGAAAGTGTTGTTTTACTAGAAGTATTGAAACTTTTGTTTTATTGAAGATTTTTCGGAAGTTGTGAAAGCTTACTTGGAAGTTTTAGTTTGAAATGTTTGGTTTTAAAAGCTTAATTGATAAAAAGATTTTGGTTTTGAAAGCACCATTTGTAACAAAGTTTTAACTGAAAATTTTGCAAGAGTTTGTATGTTTAGTTGTTTTGAAAGAAAAATGGATTTCAAAATTTGATATGCAAATTGCTTATTGAGTACTGTACTCATTTATGCTTTTCTAAAATGTTTTCAAATGATAGTTTCGAGAGTAGTAAAGTTTGAAGTTCTCGCACAAGACATAGATTTTTGTAGGATTTGATAGTTTACCTCAAAAATCATTTGTAAGGGATTGTTTCTGCTGAACTATGTAAGTTGTTACAATTTCTAATTGTTATTTTTTATGCATTATTGTTTTATAATAGTTGTATTGAAAGGTACAGGCTTCGACATGAAAAATTCTTAGATCCAGACGGTAAAAATTGTGCGATTGAACGCTGCAATCAACTCGAGTGATCGGGGTTCGTACCACCATGATACGAGCGGTGATAGTGATGAATACTCAGGGCAAGCCTCGGTTTGCTAAGTTCTACGATTTTCAGGTTCCTTTCTGGGATTTATGTTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTACTATTTGCAGCATTTCTATCAAATGATCTGTCTGATGATGAATTCTTGAATTCAGCCTGTAGAGAAGCAGCAGGAGCTCATTCGCAGCGTCTATGGGGGTTGGCAATTCTATATTTTTAATTAGATTTTTGCAAATTACTATAAGGATCAGTGGTATTTCCAATATTGCAACTATGGTTTCTTTAACCTGTATTTCTATTTTGATTTCTTTTGATTCCTGTTTTGGTACAGTACTTTGCAGTCGAGCTGAGAACGTCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTCTGGTAAGATTTCCTTGTCCAACAATTTCCTTTAGTACCGTGTTTAGCATGTACTTGAATTGATAATTCTTTGAGAAGCTAGAAATTTGACAAAAATGAATGTTGGTTGGCAACTTGGCATTGTTCAACCAGTTGAGTGCAATTATAGAGTGGCCTAGCCTAGCTGATTAGTTGGGCTAGCTAATGCTAATGAGTAATGAACCTTGGGGATTAACCTTTTCTTTCTGCTGCAGGACTCTCGTCTTGTATACAAACACTTTGCCACCCTTTATTTCGTGCTTGTCTTTAACAGTTCTGAGAATGAGCTTGCCATGCTTGACCTGATACAAGGTACTTTCAATATTATATGTGACGGATTAGTGATCACTATAGTATTTTTTATGAACGACCTGACTTGAAGAAGATCTGTTCTATGGGTTGTACAACAGTGTCATTGAGTTCTAACGAATATTTTTTACGCAAATATTATTTACATGCTTACAAGGCATCTACGAGGACTTTAGTACCCCTTGGTACCTCAAGTTTTAAACCAGATGGTATCTGGTTATGTTTTGGCATTCTTTAGTACAATAACCAGAAGTGCGAGGAATGATGAAACGTGTGGCCTTAAAATTCTCTTACTAAAAAGACCTGAATAGTTGCATAACATAACTCAAAGAGAATTGAACCAAGTAGAAGTTGAATCATCAAAACTTCTTATTTGAATGTTAGATCTTCATAAGTTTGTTGCTATATACTTTTAGGGATGTAGTGCAATGATCTGATTAGTTTTGTTGTCTTGTATTATTCCCTTGATTGATGGCATGATTAGGCCCTACTTTGTCAGTTTTTGTAGAAACATTGGACAAGTGCTTCAAAAATGTATGTGAGCTTGACTTAGTGTTCAACTACAGCAAGGTCAGCTCTCTCTCTTGA ATGAACATCGAACATGAAACTCAACTTCAACAGCGAATGCGACCTGCGACAAAGACGGAGCAGACGATGCCTGTAGAGAAGCAGCAGGAGCTCATTCGCAGCGTCTATGGGGTACTTTGCAGTCGAGCTGAGAACGTCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTCTGGACTCTCGTCTTGTATACAAACACTTTGCCACCCTTTATTTCGTGCTTGTCTTTAACAGTTCTGAGAATGAGCTTGCCATGCTTGACCTGATACAAGGCCCTACTTTGTCAGTTTTTGTAGAAACATTGGACAAGTGCTTCAAAAATGTATGTGAGCTTGACTTAGTGTTCAACTACAGCAAGGTCAGCTCTCTCTCTTGA ATGAACATCGAACATGAAACTCAACTTCAACAGCGAATGCGACCTGCGACAAAGACGGAGCAGACGATGCCTGTAGAGAAGCAGCAGGAGCTCATTCGCAGCGTCTATGGGGTACTTTGCAGTCGAGCTGAGAACGTCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTCTGGACTCTCGTCTTGTATACAAACACTTTGCCACCCTTTATTTCGTGCTTGTCTTTAACAGTTCTGAGAATGAGCTTGCCATGCTTGACCTGATACAAGGCCCTACTTTGTCAGTTTTTGTAGAAACATTGGACAAGTGCTTCAAAAATGTATGTGAGCTTGACTTAGTGTTCAACTACAGCAAGGTCAGCTCTCTCTCTTGA MNIEHETQLQQRMRPATKTEQTMPVEKQQELIRSVYGVLCSRAENVSNFVEAESIFGLDSRLVYKHFATLYFVLVFNSSENELAMLDLIQGPTLSVFVETLDKCFKNVCELDLVFNYSKVSSLS Homology
BLAST of HG10014613 vs. NCBI nr
Match: XP_008452384.1 (PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452386.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452387.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452388.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452389.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452390.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_008452391.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo] >XP_016901330.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo]) HSP 1 Score: 173.3 bits (438), Expect = 1.3e-39 Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of HG10014613 vs. NCBI nr
Match: XP_038893159.1 (AP-3 complex subunit sigma [Benincasa hispida] >XP_038893161.1 AP-3 complex subunit sigma [Benincasa hispida] >XP_038893162.1 AP-3 complex subunit sigma [Benincasa hispida] >XP_038893163.1 AP-3 complex subunit sigma [Benincasa hispida]) HSP 1 Score: 172.6 bits (436), Expect = 2.2e-39 Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of HG10014613 vs. NCBI nr
Match: XP_011655957.1 (AP-3 complex subunit sigma [Cucumis sativus] >XP_031741534.1 AP-3 complex subunit sigma [Cucumis sativus] >XP_031741535.1 AP-3 complex subunit sigma [Cucumis sativus] >XP_031741536.1 AP-3 complex subunit sigma [Cucumis sativus] >XP_031741537.1 AP-3 complex subunit sigma [Cucumis sativus] >XP_031741538.1 AP-3 complex subunit sigma [Cucumis sativus] >XP_031741539.1 AP-3 complex subunit sigma [Cucumis sativus] >KAE8648882.1 hypothetical protein Csa_008325 [Cucumis sativus]) HSP 1 Score: 171.4 bits (433), Expect = 4.9e-39 Identity = 88/100 (88.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of HG10014613 vs. NCBI nr
Match: XP_023543862.1 (AP-3 complex subunit sigma [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.9 bits (429), Expect = 1.4e-38 Identity = 88/101 (87.13%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of HG10014613 vs. NCBI nr
Match: KAG6603975.1 (AP-3 complex subunit sigma, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034147.1 AP-3 complex subunit sigma, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.1 bits (427), Expect = 2.4e-38 Identity = 88/100 (88.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy Swiss-Prot
Match: Q8VZ37 (AP-3 complex subunit sigma OS=Arabidopsis thaliana OX=3702 GN=At3g50860 PE=2 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 4.0e-36 Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy Swiss-Prot
Match: Q1JQA3 (AP-3 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP3S2 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 7.4e-22 Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy Swiss-Prot
Match: P59780 (AP-3 complex subunit sigma-2 OS=Homo sapiens OX=9606 GN=AP3S2 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 7.4e-22 Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy Swiss-Prot
Match: Q8BSZ2 (AP-3 complex subunit sigma-2 OS=Mus musculus OX=10090 GN=Ap3s2 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 7.4e-22 Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy Swiss-Prot
Match: Q5RDP9 (AP-3 complex subunit sigma-2 OS=Pongo abelii OX=9601 GN=AP3S2 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 7.4e-22 Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy TrEMBL
Match: A0A1S3BT37 (AP complex subunit sigma OS=Cucumis melo OX=3656 GN=LOC103493438 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 6.2e-40 Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy TrEMBL
Match: A0A6J1IUE1 (AP complex subunit sigma OS=Cucurbita maxima OX=3661 GN=LOC111478508 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.6e-38 Identity = 87/100 (87.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy TrEMBL
Match: A0A6J1GFL2 (AP complex subunit sigma OS=Cucurbita moschata OX=3662 GN=LOC111453507 PE=3 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 9.9e-38 Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy TrEMBL
Match: A0A6J1GFN8 (AP-3 complex subunit sigma-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453507 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37 Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of HG10014613 vs. ExPASy TrEMBL
Match: A0A1U8N8R1 (AP complex subunit sigma OS=Gossypium hirsutum OX=3635 GN=LOC107945750 PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.2e-37 Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of HG10014613 vs. TAIR 10
Match: AT3G50860.1 (Clathrin adaptor complex small chain family protein ) HSP 1 Score: 152.1 bits (383), Expect = 2.9e-37 Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 0
BLAST of HG10014613 vs. TAIR 10
Match: AT4G35410.1 (Clathrin adaptor complex small chain family protein ) HSP 1 Score: 68.6 bits (166), Expect = 4.2e-12 Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of HG10014613 vs. TAIR 10
Match: AT2G17380.1 (associated protein 19 ) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11 Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 0
BLAST of HG10014613 vs. TAIR 10
Match: AT4G35410.2 (Clathrin adaptor complex small chain family protein ) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11 Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 0
BLAST of HG10014613 vs. TAIR 10
Match: AT1G47830.1 (SNARE-like superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09 Identity = 38/114 (33.33%), Postives = 66/114 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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