HG10008856 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008856
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Mitochondrial import inner membrane translocase subunit TIM22-like
Location	Chr06: 272165 .. 277224 (+)
RNA-Seq Expression	HG10008856
Synteny	HG10008856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAAGGGAAACAGGGAGTGGTAGTTAAATTGACTCCTCCTCAGAATCCTGTGGAGCAGATTCAGGCTCGTTTCAAGGAACTAGAAAACGGGTTCAGAGCGTGGTTGGCCAAGCAGTCCCTCCCAGTTGAGGCCGCTGTTGTCACCGCCACCAGCGCTGCGCAGGGCGCTGCTATTGGTGGTTTTATGGGCACTCTCACCAACGACGTTTCTTCTTCTCTGCCCACTCCTCAAGCCGGCCTCAATCCTCAAGCCATGGCTTCTTTCAAGCAGGCCCAGGTGTGACTCTGTTCCTTTCTATTCCTTGCTTTGTTACAGTATTCTTTTCTCGAACGGCATCATACAGAAGGATTTCCCCCTCTATTGAGAATCACCTCATTTCCGAAATTCAGTTCTTCAATGAACAAACATGATTTTATGGAATTTGGGGTACCTAGTTCTTCTGCTTTTCTTTAAAATTGTAGGCTCTCGCTGGAGGTCCTTTAGTACAAGCTCGCAACTTTGCCGTCATGACAGGTGTTAATGCAGGCATATCTTCTGTTATGAAGAGATTGAGAGGCAAGGAGGACGTCCAGTCAAGGTAAGGTTTTACGACTGCTCCGCCGTTTCCTTTTCCTGATTGATAATTTGCCCTATCATCAGGCTTTGCATTCCCTGGGTTTGTTAAGTTCATTTTACTTTTTTAATGCAAAACTAATTTTGTTGAAGTGAAATTATGAAAGATGGATAGAAAAGCCAAGCTACTGCTTTTGTATCTGGCTTTGTAATTTTTCTGTTTAAGGAAGAATACTAAGGTTGCAGTTAAAAATGGTGATTAAGTTTGAATCAAGGCCACAAAGATGAGAAAATCCAAAAGTTTCCATTGTTCATTCAAGGATTAAGTGCCAAAAGAAGGCTCTTAGATGCTGCAACCAAAGGAGGGTGCTTATGTTTTTAGAACTCAAGGACACAATTGTACAACGTACGGAACAAATCATATTCAAGTAAGGTCATCCAAAGAATGTTCCTTTTGGAGATCAAATCATTTAGTTTGAGAACAGACCACTTATATCAAGAAAATTGAATTGTTTTTCAATTAACCTGTGGTAGCCCCCTTTGACTTTGTTCCTCCTCGTCAATCTTTGTAGGGAGAGTAAGGAGAAAATCCCTAAATGCAAACTCTTTATGTCTCCTGCAACTAGTATTAGGGCAGACCCTTTGAGGAGTAGGCATAGGGCCTGATACCACATGTATTAAAGAAGAAAAAAGGAAAAGATAGTAAATAGAAAATATTTGAAAAAAAATGACTGGGATACCGCATGTATTAAAGAAGAATTACCTTATCCCAGTCATAAATGCAAACTCTTTGTCTCCTGCAACTAGTATAAGGGCAGACCCTTTGAGGAGTAGGCGTATGACCTGATACCGCATGTGTTAAAAGAAGAAAAAAAGAATAGATTTTAAATAGAAAAGATTTGAAAAAATGACTGGATAAGGTAATTCCGTCCTAGAGAGTTCTAGTATGTTTTTGTTTGTTTGGGATTAAGTTTTTAGATGTTTAGTGTCTGTTTGGCGACCCAGAAAGTATAGCGCTATAGTGAAGGAGTTCTTCTTCATTCACCATTTCGTCATAAAAGGTTGATTTCTTCTAAATGGCACCAAGTTTTGTGTAGTTTTATGGAGCATTTGGGTTAAGAGTTCTTAGAAGGACGTTTAGTCATTGTTAGGTTTCATGTTTCTCCATAGACTTTGGTATAGAAGGATTTTTGTAATTACCCTTTAGGTCTTAATTTTTTAGATTCCCTTTTTGTTTTAGTTTAGCTGGGTTGTTTGCACTCCCCTTCTATTCTTTTCTTTCTTCCCAATGAATGCATTTTTCCATTAGTCAACAAACGATCAACTTAATTCATGGACCATTTAGAACTATTTTCAAAACCTTAGGGACAAAAGTGTATGCTTCCAAATTTTAGAGACCAAATGGACAACTACATCAAACCTCAGGGACCAAAAGTGTATTTTTTTCTTTTAATTTATAATTTGACTCGCAATTTTAAGCTCTTGGATTCAATCAAAGTTCTAAGTGGTATCAGAGCACAAGATTTTATGTTCAAACTTCTATAATTCATTTCTTTATCAATTAATATTGATAGCTACTTGTTAGGCTTTGCTAACTTCCAAGCCCATGAGTGAGAGAATGTGTATTAAAATATGAATAAAAGATTAAATTTACCATAATCCATCCAAGTTTTTGGGTTTAGTTGTAGTTCTACAAAGGTTGTTTAGGATTTTTGGCTTCTCCTTTCAAGAAGGAAAACAATATGCTTTGGGACATCTTGGTTAGAGCCTTTTTAGCCCTTATGGCAAGAGAGAAACTAACAAATTTTCAAAATGGAGCACACATATGGCACCACTTTTGGGAATCTAAGTTCACCATTTGTTCCCGATGTAATTGAATTCCTCTGTTTAGTAATTACCTTTTTTCCTCTCTTTGTTTCAATCAGAAGAGGTTTTCTTTAATCCTTATTTGGTAGGTTGAGTAATTCCTCTCCACCGTTTGTCGATGAAATATCTTCTTCCCTCTCAAAAAGGGAAAAAAAATTGAAAAATACTAAAAAGGAAAGAGAAAAAGAAAAAGAAAAGAGTACTACATCGCTAGGTTATTTAAGATAGGTTTATAAAATTGTTGCCAAGGTTCTAGCCAATAGTTAAGGTTCTTCCAATCAACATCTCTGAATCTCCTTTCACTTTCTTCTTCCTTTTGATGGTGGTGTCTTTAGCCACATGATCTCAAGGGGGTTGATAAGGGTGCGAATGCGATCAACAGTCTTCAGGTTGGTGTTACCAGGCTAAATTGTCTAGGTGGGCTTTCCTAGTGGGTTGTTGGTTTGTGGTCTACCCTTGTCATACACGGGCCTTTCTCTTGGGCATAAACCTAGGTGTTTGGAGTTTTGGAATCCTTTTGTAAACCAACTCCGAAGTAGTACGATATTATTTAATAAGCAAGATTACATAAGCTCCACCTTTCTAGAGGGTGGTACTCTCCCAGACTGGACTAAACAGATTTAACAAGCCAAAAGATATGCCAAAATGATACACAAAATATATTTATAGTCCCTTCATCCATCCACTAAGTGGGTGAATTTTCCCTTCTACCCCTCCTAACACAAGTATGTAATATTGGGGGTCTAACACCTTTCTTCGGGAAAATCCAAGAACAACTTTCCCTTGACAACATTTACTTATTTTTAATAATAAGAGGAAGGTTCCAACCTATTTCCTTTCTACATCCAAGAGTCAAGTCTTTGGTAAGTTGGAATGTGCTTTCCAAACCCTTGGATCTCGGAGGCTTAGGAATGGGTAACATGAGGTGTTAGAATGGATCTCTCTTTGGCGAAGTCCTTTTAAACACCTCTGTTTAGGCGTTAGTCTCTTAAGATTTTGTTTAATTATCCATTACTTGTTATTAGGGATCGATTTTTTTTTCTTTTTTTTTTTTTGGTATGGCTAGTTGCTTGGCTTTGGAGTGGATTGGTTTTTGCATGCACGTGGACGTTTTGTTTTATATTTCATTTCTTCACTATGAAAGCTTCGTTTCTCATAAAAACAAAATATTAAGGTGGTTGAACTAATTGTATAGAGAGGCCCATAACAGATGTCATAGGGCTTTGTGATATTCGGTTGTTTCCTTTTAACATTGTATGGAGAGGATAAGTAGTTCTTTATAACAATCTAGTATCCAGTTAGTAATGTATGTATTTATTCTCCTATTTTTTCCTATAGTACAATATATTTGTGGTTAAAATACCATTTTGGTCCCTATATTTTGAAGTTTGTTCAATTTTAGTCTCTATACATTCAATTGTCTAATTTTAGTCCCCGTACTTTCAGTATCTTAAATTTAGTCCCTCAAAGTTAATTTTTATCAAAATTGATTCAATAATAATAATAGTTTTCATGCAAGGAAATATAATATGTGAATATGCTTTCAAAATTTGTAGTAAAAATACTAATAAATAGCAAAAAGTTATTAAAAAATCAACAATAAATTAGCATTGGGGACTAATTTAAGATTTATTGAAAGTATAGGGACTAAAATTGGACAATTGAAAGTATAGGGACTAAAATTAAACAATTTTCAAATATAGGGACCAAAATGATATTTTAACCTATATGTATTTATTCTCACATCATATAATCGTGGTAAAAGAGTGAAGATTCCTATGTGAATAATCTTGTACACAGTTACAGTCCTTTGATGTACGTACACTCTTTTTTATGTTCCTTGTAGCCAATGAATTTTTATTTGGTTCCATGTTTCGTGTAGTGACTTGTCCTTAGAATGTATTTCTGGTTCAAGATGCAGTCTTCTATTTCATGGTGTATTACATTTCTTTTAGTTATTTTATGCGTCGCTGGCTTGTTCCCTGAAATTTGGCTAATACAATTTTGTTGTTACAGCATGGTGGCTGCTTTTGGTTCTGGGGCTATGTTTTCATTGGTGAGTGGAATGGGAGGTCCAAATCAGGCCGCAAACGCTGTTACCTCTGGTCTTTTTTTTGCCCTCGTTCAAGGTGGACTTTTCAAGGTGTGCCTCAATAGGAACTATTTTATTATTGCAAAACTTGCTGATAGTAGTCCTTTCAAGCATTCTTCTGTCTTGAAAGTCTTTGCCTGTTCCTTTGTCCTGAGTCATATGTGAGAATTTTCAATCTTCTTACAGCACGGGATGCTGAAGATATGGAATTATTAGATTAGAATTCACTTTGAGATATTCTGGTACAGCTCTAACAATTTTTGGAACGGGCTCTACTTTCTATTTCACATATTGCAAGAGCTTGTCAACAATAGAAGAAAATCATGGTGGTTTTACGGTTTTATCCTGGGGCACTTGCTTTAGAGTTAATGCTGTTTTGCAGTTGGGGGAAAAGTTTTCTCAACCACCTGTGGAAGATGTGTACTATGCTAAAACAAGAAGCATGTTGAATAACCTTGGCCTACAAAGTTATGAGAAGAATTTCAAGAAAGGCTTATTGACCGATACCACTTTGCCTCTGCTCACTGATAGGCATGTAAATTGA

mRNA sequence

ATGGAGCAAGGGAAACAGGGAGTGGTAGTTAAATTGACTCCTCCTCAGAATCCTGTGGAGCAGATTCAGGCTCGTTTCAAGGAACTAGAAAACGGGTTCAGAGCGTGGTTGGCCAAGCAGTCCCTCCCAGTTGAGGCCGCTGTTGTCACCGCCACCAGCGCTGCGCAGGGCGCTGCTATTGGTGGTTTTATGGGCACTCTCACCAACGACGTTTCTTCTTCTCTGCCCACTCCTCAAGCCGGCCTCAATCCTCAAGCCATGGCTTCTTTCAAGCAGGCCCAGGCTCTCGCTGGAGGTCCTTTAGTACAAGCTCGCAACTTTGCCGTCATGACAGGTGTTAATGCAGGCATATCTTCTGTTATGAAGAGATTGAGAGGCAAGGAGGACGTCCAGTCAAGCATGGTGGCTGCTTTTGGTTCTGGGGCTATGTTTTCATTGGTGAGTGGAATGGGAGGTCCAAATCAGGCCGCAAACGCTGTTACCTCTGGTCTTTTTTTTGCCCTCGTTCAAGGTGGACTTTTCAAGTTGGGGGAAAAGTTTTCTCAACCACCTGTGGAAGATGTGTACTATGCTAAAACAAGAAGCATGTTGAATAACCTTGGCCTACAAAGTTATGAGAAGAATTTCAAGAAAGGCTTATTGACCGATACCACTTTGCCTCTGCTCACTGATAGGCATGTAAATTGA

Coding sequence (CDS)

ATGGAGCAAGGGAAACAGGGAGTGGTAGTTAAATTGACTCCTCCTCAGAATCCTGTGGAGCAGATTCAGGCTCGTTTCAAGGAACTAGAAAACGGGTTCAGAGCGTGGTTGGCCAAGCAGTCCCTCCCAGTTGAGGCCGCTGTTGTCACCGCCACCAGCGCTGCGCAGGGCGCTGCTATTGGTGGTTTTATGGGCACTCTCACCAACGACGTTTCTTCTTCTCTGCCCACTCCTCAAGCCGGCCTCAATCCTCAAGCCATGGCTTCTTTCAAGCAGGCCCAGGCTCTCGCTGGAGGTCCTTTAGTACAAGCTCGCAACTTTGCCGTCATGACAGGTGTTAATGCAGGCATATCTTCTGTTATGAAGAGATTGAGAGGCAAGGAGGACGTCCAGTCAAGCATGGTGGCTGCTTTTGGTTCTGGGGCTATGTTTTCATTGGTGAGTGGAATGGGAGGTCCAAATCAGGCCGCAAACGCTGTTACCTCTGGTCTTTTTTTTGCCCTCGTTCAAGGTGGACTTTTCAAGTTGGGGGAAAAGTTTTCTCAACCACCTGTGGAAGATGTGTACTATGCTAAAACAAGAAGCATGTTGAATAACCTTGGCCTACAAAGTTATGAGAAGAATTTCAAGAAAGGCTTATTGACCGATACCACTTTGCCTCTGCTCACTGATAGGCATGTAAATTGA

Protein sequence

MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAIGGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKFSQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRHVN

Homology

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BLAST of HG10008856 vs. NCBI nr
Match: KAA0042522.1 (mitochondrial import inner membrane translocase subunit TIM22-like [Cucumis melo var. makuwa])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKLTPPQNP+EQIQARFKELENGFR WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 227
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226

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BLAST of HG10008856 vs. NCBI nr
Match: XP_038876132.1 (chloroplastic import inner membrane translocase subunit HP30-2-like [Benincasa hispida])

HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFR WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

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BLAST of HG10008856 vs. NCBI nr
Match: XP_008437651.1 (PREDICTED: uncharacterized protein LOC103482996 [Cucumis melo] >TYK05925.1 mitochondrial import inner membrane translocase subunit TIM22-like [Cucumis melo var. makuwa])

HSP 1 Score: 425.2 bits (1092), Expect = 3.4e-115
Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKLTPPQNP+EQIQARFKELENGFR WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

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BLAST of HG10008856 vs. NCBI nr
Match: XP_004145954.1 (chloroplastic import inner membrane translocase subunit HP30-2 [Cucumis sativus] >KGN49557.2 hypothetical protein Csa_000034 [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 7.2e-113
Identity = 219/224 (97.77%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL P QNPVEQIQARFKELENGFR WLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA NAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

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BLAST of HG10008856 vs. NCBI nr
Match: XP_022138076.1 (uncharacterized protein LOC111009335 isoform X2 [Momordica charantia])

HSP 1 Score: 408.7 bits (1049), Expect = 3.3e-110
Identity = 210/224 (93.75%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGV+VKL PPQNP+EQIQARFKELE+GF++WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVLVKLNPPQNPLEQIQARFKELESGFKSWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPL+QARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLIQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQ ANAVTSGLFF+LVQGGLFKLGE+F
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGERF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           SQPP EDVYYAKTRSMLNNLGL SYEKNFK+GLLTD+TLPLLTD
Sbjct: 181 SQPPAEDVYYAKTRSMLNNLGLPSYEKNFKRGLLTDSTLPLLTD 224

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BLAST of HG10008856 vs. ExPASy Swiss-Prot
Match: Q9FLT9 (Chloroplastic import inner membrane translocase subunit HP30-2 OS=Arabidopsis thaliana OX=3702 GN=HP30-2 PE=1 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.3e-68
Identity = 136/209 (65.07%), Postives = 163/209 (77.99%), Query Frame = 0


Query: 16  QNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAIGGFMGTLTNDVSSSL 75
           QNP++Q Q +FKE+E GF++WL+KQ LPVEAAVVTA    QGA IGG MGTL+ ++    
Sbjct: 24  QNPIQQFQVKFKEIETGFKSWLSKQKLPVEAAVVTAMGGVQGAFIGGLMGTLSPEM---- 83

Query: 76  PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMV 135
             PQAG++PQAMAS KQ QAL GGPLVQARNFA +TGVNAGI+ VMKR+RGKED++S++V
Sbjct: 84  --PQAGIDPQAMASLKQTQALVGGPLVQARNFAAITGVNAGIACVMKRIRGKEDLESAVV 143

Query: 136 AAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKFSQPPVEDVYYAKTRS 195
           AAFGSG  +SLVS  G   Q  NA+T+   FA+ QG  FKLGE+FS+P VED YY + RS
Sbjct: 144 AAFGSGVAYSLVSA-GLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSVEDPYYTRGRS 203

Query: 196 MLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           ML  LGL+ YEKNFKKGLL D TLPLLTD
Sbjct: 204 MLLKLGLEKYEKNFKKGLLADPTLPLLTD 225

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BLAST of HG10008856 vs. ExPASy Swiss-Prot
Match: Q9SCK3 (Chloroplastic import inner membrane translocase subunit HP30-1 OS=Arabidopsis thaliana OX=3702 GN=HP30-1 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.9e-65
Identity = 130/209 (62.20%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 16  QNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAIGGFMGTLTNDVSSSL 75
           QNP++Q Q +FKE+E  F+ WL+KQS+PVEAAVV+  S  QGA IGG MGTL+ ++    
Sbjct: 29  QNPIQQFQVKFKEVETNFKTWLSKQSIPVEAAVVSTMSGVQGAFIGGLMGTLSPEM---- 88

Query: 76  PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMV 135
             PQAG++PQA+AS KQAQAL GGP VQARNFA +TGVNAGI+SVMKR+RGKED++S++V
Sbjct: 89  --PQAGVDPQAIASMKQAQALVGGPWVQARNFAAITGVNAGIASVMKRIRGKEDIESAVV 148

Query: 136 AAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKFSQPPVEDVYYAKTRS 195
           AA GSG  +SLVS  G   Q  NA+T+   FA+ QG  FKLGE+FS+P  ED ++ + R+
Sbjct: 149 AALGSGFAYSLVS-QGLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSTEDPFFTRGRT 208

Query: 196 MLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           ML  LGL+ YEKNFKKGLLTD TLPLLTD
Sbjct: 209 MLVKLGLEKYEKNFKKGLLTDPTLPLLTD 230

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BLAST of HG10008856 vs. ExPASy TrEMBL
Match: A0A5A7TGI2 (Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00150 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.2e-117
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKLTPPQNP+EQIQARFKELENGFR WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 227
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRH 226

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BLAST of HG10008856 vs. ExPASy TrEMBL
Match: A0A0A0KJR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139080 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.5e-116
Identity = 223/228 (97.81%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL P QNPVEQIQARFKELENGFR WLAKQSLPVEAAVVT TSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLPPHQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTVTSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQA NAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRHVN 229
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRHVN
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDRHVN 228

[Close]

BLAST of HG10008856 vs. ExPASy TrEMBL
Match: A0A5D3C3H2 (Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00170 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKLTPPQNP+EQIQARFKELENGFR WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

[Close]

BLAST of HG10008856 vs. ExPASy TrEMBL
Match: A0A1S3AV59 (uncharacterized protein LOC103482996 OS=Cucumis melo OX=3656 GN=LOC103482996 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKLTPPQNP+EQIQARFKELENGFR WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 224

[Close]

BLAST of HG10008856 vs. ExPASy TrEMBL
Match: A0A6J1C8P3 (uncharacterized protein LOC111009335 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009335 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 210/224 (93.75%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGV+VKL PPQNP+EQIQARFKELE+GF++WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVLVKLNPPQNPLEQIQARFKELESGFKSWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPL+QARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLIQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQ ANAVTSGLFF+LVQGGLFKLGE+F
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGERF 180

Query: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           SQPP EDVYYAKTRSMLNNLGL SYEKNFK+GLLTD+TLPLLTD
Sbjct: 181 SQPPAEDVYYAKTRSMLNNLGLPSYEKNFKRGLLTDSTLPLLTD 224

[Close]

BLAST of HG10008856 vs. TAIR 10
Match: AT5G24650.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 258.5 bits (659), Expect = 5.2e-69
Identity = 136/209 (65.07%), Postives = 163/209 (77.99%), Query Frame = 0


Query: 16  QNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAIGGFMGTLTNDVSSSL 75
           QNP++Q Q +FKE+E GF++WL+KQ LPVEAAVVTA    QGA IGG MGTL+ ++    
Sbjct: 24  QNPIQQFQVKFKEIETGFKSWLSKQKLPVEAAVVTAMGGVQGAFIGGLMGTLSPEM---- 83

Query: 76  PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMV 135
             PQAG++PQAMAS KQ QAL GGPLVQARNFA +TGVNAGI+ VMKR+RGKED++S++V
Sbjct: 84  --PQAGIDPQAMASLKQTQALVGGPLVQARNFAAITGVNAGIACVMKRIRGKEDLESAVV 143

Query: 136 AAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKFSQPPVEDVYYAKTRS 195
           AAFGSG  +SLVS  G   Q  NA+T+   FA+ QG  FKLGE+FS+P VED YY + RS
Sbjct: 144 AAFGSGVAYSLVSA-GLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSVEDPYYTRGRS 203

Query: 196 MLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           ML  LGL+ YEKNFKKGLL D TLPLLTD
Sbjct: 204 MLLKLGLEKYEKNFKKGLLADPTLPLLTD 225

[Close]

BLAST of HG10008856 vs. TAIR 10
Match: AT3G49560.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 248.1 bits (632), Expect = 7.0e-66
Identity = 130/209 (62.20%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 16  QNPVEQIQARFKELENGFRAWLAKQSLPVEAAVVTATSAAQGAAIGGFMGTLTNDVSSSL 75
           QNP++Q Q +FKE+E  F+ WL+KQS+PVEAAVV+  S  QGA IGG MGTL+ ++    
Sbjct: 29  QNPIQQFQVKFKEVETNFKTWLSKQSIPVEAAVVSTMSGVQGAFIGGLMGTLSPEM---- 88

Query: 76  PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMV 135
             PQAG++PQA+AS KQAQAL GGP VQARNFA +TGVNAGI+SVMKR+RGKED++S++V
Sbjct: 89  --PQAGVDPQAIASMKQAQALVGGPWVQARNFAAITGVNAGIASVMKRIRGKEDIESAVV 148

Query: 136 AAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKFSQPPVEDVYYAKTRS 195
           AA GSG  +SLVS  G   Q  NA+T+   FA+ QG  FKLGE+FS+P  ED ++ + R+
Sbjct: 149 AALGSGFAYSLVS-QGLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSTEDPFFTRGRT 208

Query: 196 MLNNLGLQSYEKNFKKGLLTDTTLPLLTD 225
           ML  LGL+ YEKNFKKGLLTD TLPLLTD
Sbjct: 209 MLVKLGLEKYEKNFKKGLLTDPTLPLLTD 230

The following BLAST results are available for this feature:

BLAST of HG10008856 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042522.1	1.1e-116	99.12	mitochondrial import inner membrane translocase subunit TIM22-like [Cucumis melo...	[more]
XP_038876132.1	1.5e-115	99.55	chloroplastic import inner membrane translocase subunit HP30-2-like [Benincasa h...	[more]
XP_008437651.1	3.4e-115	99.11	PREDICTED: uncharacterized protein LOC103482996 [Cucumis melo] >TYK05925.1 mitoc...	[more]
XP_004145954.1	7.2e-113	97.77	chloroplastic import inner membrane translocase subunit HP30-2 [Cucumis sativus]...	[more]
XP_022138076.1	3.3e-110	93.75	uncharacterized protein LOC111009335 isoform X2 [Momordica charantia]	[more]

BLAST of HG10008856 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLT9	7.3e-68	65.07	Chloroplastic import inner membrane translocase subunit HP30-2 OS=Arabidopsis th...	[more]
Q9SCK3	9.9e-65	62.20	Chloroplastic import inner membrane translocase subunit HP30-1 OS=Arabidopsis th...	[more]

BLAST of HG10008856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGI2	5.2e-117	99.12	Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis me...	[more]
A0A0A0KJR1	7.5e-116	97.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139080 PE=4 SV=1	[more]
A0A5D3C3H2	1.7e-115	99.11	Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis me...	[more]
A0A1S3AV59	1.7e-115	99.11	uncharacterized protein LOC103482996 OS=Cucumis melo OX=3656 GN=LOC103482996 PE=...	[more]
A0A6J1C8P3	1.6e-110	93.75	uncharacterized protein LOC111009335 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of HG10008856 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24650.1	5.2e-69	65.07	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G49560.1	7.0e-66	62.20	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 48..166 e-value: 6.0E-10 score: 39.6
None	No IPR available	PANTHER	PTHR14110:SF6	CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT HP30-2	coord: 1..225
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008856.1	HG10008856.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042721	TIM22 mitochondrial import inner membrane insertion complex