Homology
BLAST of HG10016696 vs. NCBI nr
Match:
XP_038882525.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispida])
HSP 1 Score: 295.4 bits (755), Expect = 4.6e-76
Identity = 154/173 (89.02%), Postives = 159/173 (91.91%), Query Frame = 0
Query: 1 MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCL 60
M SSSF TASPP PPPIFTTNRSSVLPSSSSTARTSD FQQVE RF LLID+SKS+ L
Sbjct: 1 MPSSSFLTASPPPPPPIFTTNRSSVLPSSSSTARTSDPFQQVE--RFALLIDKSKSIPRL 60
Query: 61 LQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQC 120
LQIHASLLR LYHNPILNFKLQRSYAALGRLDYSVAVFNT DEP+VFSFSAIIHSHVQC
Sbjct: 61 LQIHASLLRHRLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQC 120
Query: 121 RLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL 174
RLFD+ALGYYSQMLTRGVEPNVFTFSSVLKSC LEPGK LHCQAIKLGFD+DL
Sbjct: 121 RLFDQALGYYSQMLTRGVEPNVFTFSSVLKSCSLEPGKVLHCQAIKLGFDSDL 171
BLAST of HG10016696 vs. NCBI nr
Match:
XP_038882525.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispida])
HSP 1 Score: 158.7 bits (400), Expect = 6.7e-35
Identity = 75/79 (94.94%), Postives = 76/79 (96.20%), Query Frame = 0
Query: 174 EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMR 233
EEQKEQSLEVHSEKLAIAFGLIST+PGT IKIVKNLRVC DCHAVMKLISEIT RKIVMR
Sbjct: 562 EEQKEQSLEVHSEKLAIAFGLISTQPGTTIKIVKNLRVCLDCHAVMKLISEITKRKIVMR 621
Query: 234 DRNRFHHFEDGLCSCGDYW 253
DRNRFHHFEDGLCSCGDYW
Sbjct: 622 DRNRFHHFEDGLCSCGDYW 640
HSP 2 Score: 283.9 bits (725), Expect = 1.4e-72
Identity = 225/642 (35.05%), Postives = 230/642 (35.83%), Query Frame = 0
Query: 1 MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCL 60
MSSSSFFTASPPSPP IFTTNRSSV PSSSSTA+TS RFQQVE RF LLID+SKSV L
Sbjct: 6 MSSSSFFTASPPSPPSIFTTNRSSVSPSSSSTAKTSGRFQQVE--RFALLIDKSKSVAHL 65
Query: 61 LQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQC 120
LQIHASLLR GLYHNPILNFKLQRSYAALGRLD SV VFNTFDEP+VFSFSAIIHSHVQ
Sbjct: 66 LQIHASLLRHGLYHNPILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSHVQS 125
Query: 121 RLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL------- 180
RLFDRA GYYSQML+RGVEPN FTFSSVLKSC LE GK LHCQAIKLG +DL
Sbjct: 126 RLFDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLV 185
Query: 181 ------------------------------------------------------------ 240
Sbjct: 186 DVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVCWNV 245
Query: 241 ------------------------------------------------------------ 253
Sbjct: 246 MIGGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIENKS 305
BLAST of HG10016696 vs. NCBI nr
Match:
TYK12851.1 (pentatricopeptide repeat-containing protein ELI1 [Cucumis melo var. makuwa])
HSP 1 Score: 278.9 bits (712), Expect = 4.4e-71
Identity = 224/642 (34.89%), Postives = 228/642 (35.51%), Query Frame = 0
Query: 1 MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCL 60
MSSSSFFTASPPSPP IFTTNR SV PSSSSTARTS RFQQVE RF LLID+SKSV L
Sbjct: 6 MSSSSFFTASPPSPPSIFTTNRFSVSPSSSSTARTSGRFQQVE--RFALLIDKSKSVAHL 65
Query: 61 LQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQC 120
LQIHASLLR GLYHN ILNFKLQRSYAALGRLD SV VFNTFDEP+VFSFSAIIHSHVQ
Sbjct: 66 LQIHASLLRHGLYHNLILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSHVQS 125
Query: 121 RLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL------- 180
RLFDRA GYYSQML+RGVEPN FTFSSVLKSC LE GK LHCQAIKLG +DL
Sbjct: 126 RLFDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLV 185
Query: 181 ------------------------------------------------------------ 240
Sbjct: 186 DVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVCWNV 245
Query: 241 ------------------------------------------------------------ 253
Sbjct: 246 MIGGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIENKS 305
BLAST of HG10016696 vs. NCBI nr
Match:
XP_022132503.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Momordica charantia])
HSP 1 Score: 278.1 bits (710), Expect = 7.5e-71
Identity = 217/642 (33.80%), Postives = 233/642 (36.29%), Query Frame = 0
Query: 1 MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCL 60
MSSSSFFTA PPSPPP+ TTNRSS+LPSS STA TSDR QQVE RF LID+S+SV L
Sbjct: 1 MSSSSFFTAPPPSPPPLVTTNRSSLLPSSPSTATTSDRSQQVE--RFASLIDKSRSVIRL 60
Query: 61 LQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQC 120
LQIHASLLR GLYH+PILNFKLQRSYA +GRLDYSVAVFNT D+P+VFS+S+IIHSH QC
Sbjct: 61 LQIHASLLRQGLYHHPILNFKLQRSYATVGRLDYSVAVFNTSDDPNVFSYSSIIHSHAQC 120
Query: 121 RLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL------- 180
LFD+AL +YSQMLTRGVEPNVFTFSSVLKSC LEPGKALHCQAIKLGFD+DL
Sbjct: 121 GLFDQALDFYSQMLTRGVEPNVFTFSSVLKSCSLEPGKALHCQAIKLGFDSDLYVRTGLV 180
Query: 181 ------------------------------------------------------------ 240
Sbjct: 181 DVYARGGEVVCARQLFDKMPERSLVSLTAMLTCYTKLGELDEARALFDGMKERDVVCWNV 240
Query: 241 ------------------------------------------------------------ 253
Sbjct: 241 MIGGYAQNGVPNESLKLFRRMLVAKVKPNEVTVLAVLSACGQLGALESGRWVHSYIENKG 300
BLAST of HG10016696 vs. NCBI nr
Match:
XP_004141894.1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucumis sativus])
HSP 1 Score: 278.1 bits (710), Expect = 7.5e-71
Identity = 222/642 (34.58%), Postives = 229/642 (35.67%), Query Frame = 0
Query: 1 MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCL 60
MSSSS FTAS PSPP IFTTNRSSVLPSSSSTARTSDRFQ+VE RF LID+SKSV L
Sbjct: 6 MSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVE--RFASLIDKSKSVAHL 65
Query: 61 LQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQC 120
LQIHASLLR GLYHNPILNFKLQRSYAALGRLD SV VFNTFDEP+VFSFSAIIHSHVQ
Sbjct: 66 LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS 125
Query: 121 RLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL------- 180
RLFDRA GYYSQML+ GVEPN FTFSSVLKSC LE GK LHCQAIKLG +DL
Sbjct: 126 RLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLV 185
Query: 181 ------------------------------------------------------------ 240
Sbjct: 186 DVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNV 245
Query: 241 ------------------------------------------------------------ 253
Sbjct: 246 MIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKG 305
BLAST of HG10016696 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 5.9e-34
Identity = 85/191 (44.50%), Postives = 110/191 (57.59%), Query Frame = 0
Query: 63 IHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRL 122
I ++ SG+Y L YA++G + V N E + I ++ ++
Sbjct: 456 IGLNIKNSGIY------VLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKV 515
Query: 123 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADLEE-QKEQSL 182
+ G ++ + + S +KS P Q DLEE +KEQSL
Sbjct: 516 HEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQ--------DLEETEKEQSL 575
Query: 183 EVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHF 242
+VHSE+LAIA+GLISTKPG+ +KI KNLRVCSDCH V KLIS+ITGRKIVMRDRNRFHHF
Sbjct: 576 QVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHF 632
Query: 243 EDGLCSCGDYW 253
DG CSCGD+W
Sbjct: 636 TDGSCSCGDFW 632
HSP 2 Score: 109.4 bits (272), Expect = 6.1e-23
Identity = 59/150 (39.33%), Postives = 93/150 (62.00%), Query Frame = 0
Query: 26 LPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLY---HNPILNFKL 85
LP + + + RF+ ++ +LID+S+SVD +LQIHA++LR L P+LN KL
Sbjct: 11 LPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKL 70
Query: 86 QRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNV 145
R+YA+ G++ +S+A+F+ +P +F F+A I++ L D+A Y Q+L+ + PN
Sbjct: 71 HRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNE 130
Query: 146 FTFSSVLKSCLLEPGKALHCQAIKLGFDAD 173
FTFSS+LKSC + GK +H +K G D
Sbjct: 131 FTFSSLLKSCSTKSGKLIHTHVLKFGLGID 160
BLAST of HG10016696 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 1.8e-30
Identity = 58/84 (69.05%), Postives = 72/84 (85.71%), Query Frame = 0
Query: 169 FDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGR 228
FD D EE+KE S+ +HSEKLAIA+G++ TKPGT I+IVKNLRVC DCH V KLISE+ GR
Sbjct: 540 FDVD-EEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGR 599
Query: 229 KIVMRDRNRFHHFEDGLCSCGDYW 253
++++RDRNRFHHF +G+CSC DYW
Sbjct: 600 ELIVRDRNRFHHFRNGVCSCRDYW 622
BLAST of HG10016696 vs. ExPASy Swiss-Prot
Match:
Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 5.1e-30
Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 0
Query: 94 YSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTF---SSVLK 153
Y V + N + +A + + R +A GY ++ G P+VFT S
Sbjct: 625 YHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGY--TLIEIGETPHVFTSGDQSHPQV 684
Query: 154 SCLLEPGKALHCQAIKLGFDADL--------EEQKEQSLEVHSEKLAIAFGLISTKPGTA 213
+ E + L + + G+ + EE++E ++VHSE+LAIAFGLI+T+PGT
Sbjct: 685 KEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTE 744
Query: 214 IKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 253
I+I+KNLRVC DCH V KLIS+IT R IV+RD NRFHHF+DG+CSCGDYW
Sbjct: 745 IRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of HG10016696 vs. ExPASy Swiss-Prot
Match:
Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)
HSP 1 Score: 129.8 bits (325), Expect = 4.3e-29
Identity = 61/111 (54.95%), Postives = 80/111 (72.07%), Query Frame = 0
Query: 142 VFTFSSVLKSCLLEPGKALHCQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGT 201
++ F + L LLE G + ++ D EE+KE +L VHSEKLAIAFG+++T PG+
Sbjct: 552 IYEFLAELNRKLLEAGYVSNTSSVCHDVD---EEEKEMTLRVHSEKLAIAFGIMNTVPGS 611
Query: 202 AIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 253
+ +VKNLRVCSDCH V+KLIS+I R+ V+RD RFHHF+DG CSCGDYW
Sbjct: 612 TVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of HG10016696 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 4.1e-27
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 0
Query: 174 EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMR 233
EE+KE++L HSEKLA+AFGL+ST P T I+++KNLRVC DCH MK I+++ R+IV+R
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 971
Query: 234 DRNRFHHFEDGLCSCGDYW 253
D NRFH F+DG+CSCGDYW
Sbjct: 972 DANRFHRFKDGICSCGDYW 990
BLAST of HG10016696 vs. ExPASy TrEMBL
Match:
A0A1S3B0U7 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484813 PE=3 SV=1)
HSP 1 Score: 283.9 bits (725), Expect = 6.6e-73
Identity = 225/642 (35.05%), Postives = 230/642 (35.83%), Query Frame = 0
Query: 1 MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCL 60
MSSSSFFTASPPSPP IFTTNRSSV PSSSSTA+TS RFQQVE RF LLID+SKSV L
Sbjct: 6 MSSSSFFTASPPSPPSIFTTNRSSVSPSSSSTAKTSGRFQQVE--RFALLIDKSKSVAHL 65
Query: 61 LQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQC 120
LQIHASLLR GLYHNPILNFKLQRSYAALGRLD SV VFNTFDEP+VFSFSAIIHSHVQ
Sbjct: 66 LQIHASLLRHGLYHNPILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSHVQS 125
Query: 121 RLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL------- 180
RLFDRA GYYSQML+RGVEPN FTFSSVLKSC LE GK LHCQAIKLG +DL
Sbjct: 126 RLFDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLV 185
Query: 181 ------------------------------------------------------------ 240
Sbjct: 186 DVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVCWNV 245
Query: 241 ------------------------------------------------------------ 253
Sbjct: 246 MIGGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIENKS 305
BLAST of HG10016696 vs. ExPASy TrEMBL
Match:
A0A5D3CM09 (Pentatricopeptide repeat-containing protein ELI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004430 PE=3 SV=1)
HSP 1 Score: 278.9 bits (712), Expect = 2.1e-71
Identity = 224/642 (34.89%), Postives = 228/642 (35.51%), Query Frame = 0
Query: 1 MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCL 60
MSSSSFFTASPPSPP IFTTNR SV PSSSSTARTS RFQQVE RF LLID+SKSV L
Sbjct: 6 MSSSSFFTASPPSPPSIFTTNRFSVSPSSSSTARTSGRFQQVE--RFALLIDKSKSVAHL 65
Query: 61 LQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQC 120
LQIHASLLR GLYHN ILNFKLQRSYAALGRLD SV VFNTFDEP+VFSFSAIIHSHVQ
Sbjct: 66 LQIHASLLRHGLYHNLILNFKLQRSYAALGRLDCSVVVFNTFDEPNVFSFSAIIHSHVQS 125
Query: 121 RLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL------- 180
RLFDRA GYYSQML+RGVEPN FTFSSVLKSC LE GK LHCQAIKLG +DL
Sbjct: 126 RLFDRAFGYYSQMLSRGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLV 185
Query: 181 ------------------------------------------------------------ 240
Sbjct: 186 DVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDEARSLFEGMKERDVVCWNV 245
Query: 241 ------------------------------------------------------------ 253
Sbjct: 246 MIGGYAQNGVPNESLKLFRRMLVSKAIPNEVTVLAVLSACGQLGALESGRWVHSYIENKS 305
BLAST of HG10016696 vs. ExPASy TrEMBL
Match:
A0A0A0KGF1 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G492280 PE=3 SV=1)
HSP 1 Score: 278.1 bits (710), Expect = 3.6e-71
Identity = 222/642 (34.58%), Postives = 229/642 (35.67%), Query Frame = 0
Query: 1 MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCL 60
MSSSS FTAS PSPP IFTTNRSSVLPSSSSTARTSDRFQ+VE RF LID+SKSV L
Sbjct: 6 MSSSSIFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVE--RFASLIDKSKSVAHL 65
Query: 61 LQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQC 120
LQIHASLLR GLYHNPILNFKLQRSYAALGRLD SV VFNTFDEP+VFSFSAIIHSHVQ
Sbjct: 66 LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS 125
Query: 121 RLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL------- 180
RLFDRA GYYSQML+ GVEPN FTFSSVLKSC LE GK LHCQAIKLG +DL
Sbjct: 126 RLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLV 185
Query: 181 ------------------------------------------------------------ 240
Sbjct: 186 DVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNV 245
Query: 241 ------------------------------------------------------------ 253
Sbjct: 246 MIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKG 305
BLAST of HG10016696 vs. ExPASy TrEMBL
Match:
A0A6J1BWF5 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005343 PE=3 SV=1)
HSP 1 Score: 278.1 bits (710), Expect = 3.6e-71
Identity = 217/642 (33.80%), Postives = 233/642 (36.29%), Query Frame = 0
Query: 1 MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCL 60
MSSSSFFTA PPSPPP+ TTNRSS+LPSS STA TSDR QQVE RF LID+S+SV L
Sbjct: 1 MSSSSFFTAPPPSPPPLVTTNRSSLLPSSPSTATTSDRSQQVE--RFASLIDKSRSVIRL 60
Query: 61 LQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQC 120
LQIHASLLR GLYH+PILNFKLQRSYA +GRLDYSVAVFNT D+P+VFS+S+IIHSH QC
Sbjct: 61 LQIHASLLRQGLYHHPILNFKLQRSYATVGRLDYSVAVFNTSDDPNVFSYSSIIHSHAQC 120
Query: 121 RLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL------- 180
LFD+AL +YSQMLTRGVEPNVFTFSSVLKSC LEPGKALHCQAIKLGFD+DL
Sbjct: 121 GLFDQALDFYSQMLTRGVEPNVFTFSSVLKSCSLEPGKALHCQAIKLGFDSDLYVRTGLV 180
Query: 181 ------------------------------------------------------------ 240
Sbjct: 181 DVYARGGEVVCARQLFDKMPERSLVSLTAMLTCYTKLGELDEARALFDGMKERDVVCWNV 240
Query: 241 ------------------------------------------------------------ 253
Sbjct: 241 MIGGYAQNGVPNESLKLFRRMLVAKVKPNEVTVLAVLSACGQLGALESGRWVHSYIENKG 300
BLAST of HG10016696 vs. ExPASy TrEMBL
Match:
A0A6J1GED1 (pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453386 PE=3 SV=1)
HSP 1 Score: 273.1 bits (697), Expect = 1.2e-69
Identity = 145/171 (84.80%), Postives = 151/171 (88.30%), Query Frame = 0
Query: 3 SSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQ 62
+SSF TASP SPPPIFTTN SSVL SS STARTSDRFQQVE F +LID+SKSVD LLQ
Sbjct: 2 TSSFLTASPASPPPIFTTNCSSVLRSSCSTARTSDRFQQVE--SFAMLIDKSKSVDRLLQ 61
Query: 63 IHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRL 122
IHAS+LR GLYHNPILNFKLQRSYAALGRLDYSVAVFNT DEP+VFSFSAIIHSHVQC L
Sbjct: 62 IHASVLRHGLYHNPILNFKLQRSYAALGRLDYSVAVFNTSDEPNVFSFSAIIHSHVQCGL 121
Query: 123 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL 174
FDRAL YY QML GVEPNVFTFSSVLKSC LE GK LHCQAIKLGFD+DL
Sbjct: 122 FDRALDYYLQMLNGGVEPNVFTFSSVLKSCSLELGKVLHCQAIKLGFDSDL 170
BLAST of HG10016696 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 146.0 bits (367), Expect = 4.2e-35
Identity = 85/191 (44.50%), Postives = 110/191 (57.59%), Query Frame = 0
Query: 63 IHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRL 122
I ++ SG+Y L YA++G + V N E + I ++ ++
Sbjct: 456 IGLNIKNSGIY------VLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKV 515
Query: 123 FDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADLEE-QKEQSL 182
+ G ++ + + S +KS P Q DLEE +KEQSL
Sbjct: 516 HEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQ--------DLEETEKEQSL 575
Query: 183 EVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHF 242
+VHSE+LAIA+GLISTKPG+ +KI KNLRVCSDCH V KLIS+ITGRKIVMRDRNRFHHF
Sbjct: 576 QVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHF 632
Query: 243 EDGLCSCGDYW 253
DG CSCGD+W
Sbjct: 636 TDGSCSCGDFW 632
HSP 2 Score: 109.4 bits (272), Expect = 4.3e-24
Identity = 59/150 (39.33%), Postives = 93/150 (62.00%), Query Frame = 0
Query: 26 LPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLY---HNPILNFKL 85
LP + + + RF+ ++ +LID+S+SVD +LQIHA++LR L P+LN KL
Sbjct: 11 LPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKL 70
Query: 86 QRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNV 145
R+YA+ G++ +S+A+F+ +P +F F+A I++ L D+A Y Q+L+ + PN
Sbjct: 71 HRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNE 130
Query: 146 FTFSSVLKSCLLEPGKALHCQAIKLGFDAD 173
FTFSS+LKSC + GK +H +K G D
Sbjct: 131 FTFSSLLKSCSTKSGKLIHTHVLKFGLGID 160
BLAST of HG10016696 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 134.4 bits (337), Expect = 1.3e-31
Identity = 58/84 (69.05%), Postives = 72/84 (85.71%), Query Frame = 0
Query: 169 FDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGR 228
FD D EE+KE S+ +HSEKLAIA+G++ TKPGT I+IVKNLRVC DCH V KLISE+ GR
Sbjct: 540 FDVD-EEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGR 599
Query: 229 KIVMRDRNRFHHFEDGLCSCGDYW 253
++++RDRNRFHHF +G+CSC DYW
Sbjct: 600 ELIVRDRNRFHHFRNGVCSCRDYW 622
HSP 2 Score: 43.1 bits (100), Expect = 3.8e-04
Identity = 45/171 (26.32%), Postives = 72/171 (42.11%), Query Frame = 0
Query: 67 LLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAII-----HSHVQCR 126
+++S + N IL L + G ++ ++ VF E S+S+II H H
Sbjct: 275 VVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAH-- 334
Query: 127 LFDRALGYYSQMLTRGVEPNVFTFSSVLKSC----LLEPGKALH---------------- 186
+A+ Y+SQM++ G P TF++VL +C L+E G ++
Sbjct: 335 ---KAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHY 394
Query: 187 -CQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRV 212
C LG L E + L++H + A G + A KI KN V
Sbjct: 395 GCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL----GACKIYKNTEV 436
BLAST of HG10016696 vs. TAIR 10
Match:
AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 132.9 bits (333), Expect = 3.6e-31
Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 0
Query: 94 YSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTF---SSVLK 153
Y V + N + +A + + R +A GY ++ G P+VFT S
Sbjct: 625 YHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGY--TLIEIGETPHVFTSGDQSHPQV 684
Query: 154 SCLLEPGKALHCQAIKLGFDADL--------EEQKEQSLEVHSEKLAIAFGLISTKPGTA 213
+ E + L + + G+ + EE++E ++VHSE+LAIAFGLI+T+PGT
Sbjct: 685 KEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTE 744
Query: 214 IKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 253
I+I+KNLRVC DCH V KLIS+IT R IV+RD NRFHHF+DG+CSCGDYW
Sbjct: 745 IRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of HG10016696 vs. TAIR 10
Match:
AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 129.8 bits (325), Expect = 3.1e-30
Identity = 61/111 (54.95%), Postives = 80/111 (72.07%), Query Frame = 0
Query: 142 VFTFSSVLKSCLLEPGKALHCQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGT 201
++ F + L LLE G + ++ D EE+KE +L VHSEKLAIAFG+++T PG+
Sbjct: 552 IYEFLAELNRKLLEAGYVSNTSSVCHDVD---EEEKEMTLRVHSEKLAIAFGIMNTVPGS 611
Query: 202 AIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 253
+ +VKNLRVCSDCH V+KLIS+I R+ V+RD RFHHF+DG CSCGDYW
Sbjct: 612 TVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of HG10016696 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 123.2 bits (308), Expect = 2.9e-28
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 0
Query: 174 EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMR 233
EE+KE++L HSEKLA+AFGL+ST P T I+++KNLRVC DCH MK I+++ R+IV+R
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 971
Query: 234 DRNRFHHFEDGLCSCGDYW 253
D NRFH F+DG+CSCGDYW
Sbjct: 972 DANRFHRFKDGICSCGDYW 990
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882525.1 | 4.6e-76 | 89.02 | pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispi... | [more] |
XP_038882525.1 | 6.7e-35 | 94.94 | pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispi... | [more] |
TYK12851.1 | 4.4e-71 | 34.89 | pentatricopeptide repeat-containing protein ELI1 [Cucumis melo var. makuwa] | [more] |
XP_022132503.1 | 7.5e-71 | 33.80 | pentatricopeptide repeat-containing protein ELI1, chloroplastic [Momordica chara... | [more] |
XP_004141894.1 | 7.5e-71 | 34.58 | pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucumis sativus... | [more] |
Match Name | E-value | Identity | Description | |
Q9SZT8 | 5.9e-34 | 44.50 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
Q9FG16 | 1.8e-30 | 69.05 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
Q9SUH6 | 5.1e-30 | 43.53 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... | [more] |
Q9LW32 | 4.3e-29 | 54.95 | Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... | [more] |
Q9SMZ2 | 4.1e-27 | 64.56 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3B0U7 | 6.6e-73 | 35.05 | pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucumis melo ... | [more] |
A0A5D3CM09 | 2.1e-71 | 34.89 | Pentatricopeptide repeat-containing protein ELI1 OS=Cucumis melo var. makuwa OX=... | [more] |
A0A0A0KGF1 | 3.6e-71 | 34.58 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G4922... | [more] |
A0A6J1BWF5 | 3.6e-71 | 33.80 | pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Momordica cha... | [more] |
A0A6J1GED1 | 1.2e-69 | 84.80 | pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Cucurbita mos... | [more] |
Pages
Match Name | E-value | Identity | Description | |
AT4G37380.1 | 4.2e-35 | 44.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G06540.1 | 1.3e-31 | 69.05 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G30700.1 | 3.6e-31 | 43.53 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G26782.1 | 3.1e-30 | 54.95 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33170.1 | 2.9e-28 | 64.56 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |