Moc11g00590 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTTCCCCCGCGGTAGTCGCACCACCAACGAATATTAGCAGAGAAAACACAAAGGGGCGGAGACAGAGAGAAGGGGAAGAGATCTTAAATTCTGGATGACGTGGGCCAATAGGGTGAGAGTGCGCGGATTGATGAGGTGGCAATAAATTTAGAATCCCGCCTAAACCCCTGTTTTCATTTGGTGCGCAATTGAATTTCAATTTGGCCTCTCGGACTTAATATCTCTCTTCTTTTTACTATCTTTCGGTTCCCCTTTCCTCACACGCAGGTCCGCTCCCTCCACCCTCTTCAAACCCTAAACCTAACCCAGCCTCGCTCCGGAGCCCCCCACCGAGGTTCGTTTCATCGATCTCCTTCCAATTCCGACCTAATTTCACGTCTTTTCATTGTTTTCCTTCGAGATTGTTGCTGATCCGATCTTATAACTGCAGGATTCGACATGAAAGGTGGAAAATCGAAGTCCGAGTCGAAGAAAGCAGACGCGAAGTGAGTTTTTTTTTTTTTTTTCTCGCCCTATTTCTCCGTCGGATGTGTTTAATTTATAGCTCTGATCGGCCCTAGATTTAAGAAGCTTCGTTGCTTAAATTACCTTTGTAAAAGCTATGCGTTGACCTTTTCTTTTTTGATTGATCGGTTTTGGCGATCTTTTTTGTAGGCTTTCTGTGAAGAAAGGTGCAGCCAAAGCGGGCGCAACACGGGGTAAGAAAGCAGGGAAGGATCCTAACAAACCTAAGCGGCCGGCCAGTGCCTTCTTCGTTTTTATGTAATTATTTCATTTTTCAATTTACTTTTAGATGTCTGAATTACGCTGCTTGACTGCAAATTATTCATTCGGATGGTTGTAGAGTTGGAAAAATTGCAAACAAGGAAGAAAAGAACTATGAAGTTGTTTTCGGTGATTTTTGTTTAAGGATGTTAAATAAGCCGGCTTTCAACAAAACGATCTCTGTGTTATATGTGTATTTAGCTAGTGGACCCGTTCTTTTGTTTTATCTGTAAGTCGATTACGTATCTAAAATCTGTGTTGTCATGTTGTTGCACGTTTTGTAATTAAAGGGAGGAGTTCAGGAAGAAGTTTAATGAAGAGAATCCGAATAACAAAGCAGTATCCGCTGTAAGCTATTTACCTTTGTCTAATTGTCAATTCTTTTTTCTTGTCCCCATTTCATATTATATAAATTCTTTTATGGAAATGAGCAGTTATAATTGACCTACAAATGATACCATCAGGTTGGTAAAGCTGCTGGACAGAAATGGAAATCATTGTCAGATGCTGTACGTGATACCTCTCGTAGTATTTTCTAAATTTCTCCTGGTATTATAAACTCTGTCTGAATTACTGTTTATAATATCAGGAAAAAGCACCTTACATTGCTAAGGCTGACAAGAGGAAGGTTGAATATGAGAAAAATATGAAGGCCTATAACAAGAAACAGGTACTGAAAACTTTCCGAATCTTATATTTTGCAGCTGTATTTTATTTTGTAAATTCATTATCTCTCCCTGCTCCATTTGAGTTCAGGCCAGTGGAGCCAATGCTGCTGAAGAAGATGAATCTGAGAAGTCCATGTCTGAGGTGAATGATGATGAGGATGGAGACGAGGGCAGCGAAGAGGTTAGTGGGTTGAAGAATTTTTTCCAGTCATTATTGTGCTTTGTACCCTTTCACTTATTTCATTTCTCTCTTGTGGTTGCAGGAGGAAGATGACGAGTAA ATGCCTTTCCCCCGCGGATTCGACATGAAAGGTGGAAAATCGAAGTCCGAGTCGAAGAAAGCAGACGCGAAGCTTTCTGTGAAGAAAGGTGCAGCCAAAGCGGGCGCAACACGGGGTAAGAAAGCAGGGAAGGATCCTAACAAACCTAAGCGGCCGGCCAGTGCCTTCTTCGTTTTTATGGAGGAGTTCAGGAAGAAGTTTAATGAAGAGAATCCGAATAACAAAGCAGTATCCGCTGTTGGTAAAGCTGCTGGACAGAAATGGAAATCATTGTCAGATGCTGAAAAAGCACCTTACATTGCTAAGGCTGACAAGAGGAAGGTTGAATATGAGAAAAATATGAAGGCCTATAACAAGAAACAGGCCAGTGGAGCCAATGCTGCTGAAGAAGATGAATCTGAGAAGTCCATGTCTGAGGTGAATGATGATGAGGATGGAGACGAGGGCAGCGAAGAGGAGGAAGATGACGAGTAA ATGCCTTTCCCCCGCGGATTCGACATGAAAGGTGGAAAATCGAAGTCCGAGTCGAAGAAAGCAGACGCGAAGCTTTCTGTGAAGAAAGGTGCAGCCAAAGCGGGCGCAACACGGGGTAAGAAAGCAGGGAAGGATCCTAACAAACCTAAGCGGCCGGCCAGTGCCTTCTTCGTTTTTATGGAGGAGTTCAGGAAGAAGTTTAATGAAGAGAATCCGAATAACAAAGCAGTATCCGCTGTTGGTAAAGCTGCTGGACAGAAATGGAAATCATTGTCAGATGCTGAAAAAGCACCTTACATTGCTAAGGCTGACAAGAGGAAGGTTGAATATGAGAAAAATATGAAGGCCTATAACAAGAAACAGGCCAGTGGAGCCAATGCTGCTGAAGAAGATGAATCTGAGAAGTCCATGTCTGAGGTGAATGATGATGAGGATGGAGACGAGGGCAGCGAAGAGGAGGAAGATGACGAGTAA MPFPRGFDMKGGKSKSESKKADAKLSVKKGAAKAGATRGKKAGKDPNKPKRPASAFFVFMEEFRKKFNEENPNNKAVSAVGKAAGQKWKSLSDAEKAPYIAKADKRKVEYEKNMKAYNKKQASGANAAEEDESEKSMSEVNDDEDGDEGSEEEEDDE Homology
BLAST of Moc11g00590 vs. NCBI nr
Match: XP_022142588.1 (HMG1/2-like protein [Momordica charantia]) HSP 1 Score: 262.7 bits (670), Expect = 2.0e-66 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Moc11g00590 vs. NCBI nr
Match: XP_038896795.1 (HMG1/2-like protein isoform X1 [Benincasa hispida]) HSP 1 Score: 243.8 bits (621), Expect = 9.8e-61 Identity = 137/149 (91.95%), Postives = 143/149 (95.97%), Query Frame = 0
BLAST of Moc11g00590 vs. NCBI nr
Match: KAG6591217.1 (DNA repair RAD52-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59 Identity = 135/152 (88.82%), Postives = 144/152 (94.74%), Query Frame = 0
BLAST of Moc11g00590 vs. NCBI nr
Match: XP_008452973.1 (PREDICTED: HMG1/2-like protein [Cucumis melo]) HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59 Identity = 138/149 (92.62%), Postives = 142/149 (95.30%), Query Frame = 0
BLAST of Moc11g00590 vs. NCBI nr
Match: XP_022936925.1 (HMG1/2-like protein [Cucurbita moschata] >XP_023536298.1 HMG1/2-like protein [Cucurbita pepo subsp. pepo] >KAG7024101.1 hypothetical protein SDJN02_12914, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 235.0 bits (598), Expect = 4.6e-58 Identity = 133/149 (89.26%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy Swiss-Prot
Match: P26585 (HMG1/2-like protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 4.9e-47 Identity = 114/152 (75.00%), Postives = 132/152 (86.84%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy Swiss-Prot
Match: O49596 (High mobility group B protein 2 OS=Arabidopsis thaliana OX=3702 GN=HMGB2 PE=1 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.4e-41 Identity = 103/149 (69.13%), Postives = 125/149 (83.89%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy Swiss-Prot
Match: P93047 (High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.4e-39 Identity = 99/149 (66.44%), Postives = 120/149 (80.54%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy Swiss-Prot
Match: P40619 (HMG1/2-like protein OS=Ipomoea nil OX=35883 PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.3e-36 Identity = 96/149 (64.43%), Postives = 121/149 (81.21%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy Swiss-Prot
Match: P27347 (DNA-binding protein MNB1B OS=Zea mays OX=4577 GN=MNB1B PE=1 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.5e-35 Identity = 99/158 (62.66%), Postives = 122/158 (77.22%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy TrEMBL
Match: A0A6J1CNM1 (HMG1/2-like protein OS=Momordica charantia OX=3673 GN=LOC111012664 PE=3 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 9.9e-67 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy TrEMBL
Match: A0A1S3BW96 (HMG1/2-like protein OS=Cucumis melo OX=3656 GN=LOC103493820 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 6.9e-60 Identity = 138/149 (92.62%), Postives = 142/149 (95.30%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy TrEMBL
Match: A0A6J1FF34 (HMG1/2-like protein OS=Cucurbita moschata OX=3662 GN=LOC111443365 PE=3 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58 Identity = 133/149 (89.26%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy TrEMBL
Match: A0A6J1IF57 (HMG1/2-like protein OS=Cucurbita maxima OX=3661 GN=LOC111476382 PE=3 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 4.9e-58 Identity = 132/149 (88.59%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of Moc11g00590 vs. ExPASy TrEMBL
Match: A0A5A7VCD7 (HMG1/2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003710 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 9.6e-54 Identity = 130/149 (87.25%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of Moc11g00590 vs. TAIR 10
Match: AT1G20693.1 (high mobility group B2 ) HSP 1 Score: 170.6 bits (431), Expect = 9.8e-43 Identity = 103/149 (69.13%), Postives = 125/149 (83.89%), Query Frame = 0
BLAST of Moc11g00590 vs. TAIR 10
Match: AT1G20693.3 (high mobility group B2 ) HSP 1 Score: 169.5 bits (428), Expect = 2.2e-42 Identity = 102/148 (68.92%), Postives = 124/148 (83.78%), Query Frame = 0
BLAST of Moc11g00590 vs. TAIR 10
Match: AT1G20693.2 (high mobility group B2 ) HSP 1 Score: 167.2 bits (422), Expect = 1.1e-41 Identity = 100/147 (68.03%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of Moc11g00590 vs. TAIR 10
Match: AT1G20696.1 (high mobility group B3 ) HSP 1 Score: 161.8 bits (408), Expect = 4.6e-40 Identity = 99/149 (66.44%), Postives = 120/149 (80.54%), Query Frame = 0
BLAST of Moc11g00590 vs. TAIR 10
Match: AT1G20696.3 (high mobility group B3 ) HSP 1 Score: 157.5 bits (397), Expect = 8.6e-39 Identity = 95/144 (65.97%), Postives = 115/144 (79.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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