Sed0000623 (gene) Chayote v1

Overview


Name	Sed0000623
Type	gene
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG09: 27491775 .. 27492221 (-)
RNA-Seq Expression	Sed0000623
Synteny	Sed0000623

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCATGCACGAGAAATGAAATCAATGGAAAAGCAACTTTTTGTTTTGTTGATCGTGTTGCCATTAGTAATACTTGAGCCAGTCAAGGCAGCCGAGTTTACTAAATGGCATATCCACATCGTGAACGGACTAAGCAATGGTCAAATGTTGATGGTGCACTGCAAATCTAAGGATGTTGATCTAGGCGTACACAATGTCAGCGTTGGAGCTGAATTTGATTGGGTTTTTCGTGTCAACCTTATGATGACTACACTTTTTTGGTGTACTTCGCAAAAGCCAAATGCTCAATCTGTTTCCTTTGAGGCTTTTTGGGTCGAGAGTACATCTATTTGGCTCTATGATCATTGTTATGAGACTAACTGTATTTGGATCGCAAGAGATGATGGAATCTATTTGGAAGCGAACGGAGAAAATAGGGACGATTTCATTCATAAGTGGCTGTAA

mRNA sequence

ATGTTTCATGCACGAGAAATGAAATCAATGGAAAAGCAACTTTTTGTTTTGTTGATCGTGTTGCCATTAGTAATACTTGAGCCAGTCAAGGCAGCCGAGTTTACTAAATGGCATATCCACATCGTGAACGGACTAAGCAATGGTCAAATGTTGATGGTGCACTGCAAATCTAAGGATGTTGATCTAGGCGTACACAATGTCAGCGTTGGAGCTGAATTTGATTGGGTTTTTCGTGTCAACCTTATGATGACTACACTTTTTTGGTGTACTTCGCAAAAGCCAAATGCTCAATCTGTTTCCTTTGAGGCTTTTTGGGTCGAGAGTACATCTATTTGGCTCTATGATCATTGTTATGAGACTAACTGTATTTGGATCGCAAGAGATGATGGAATCTATTTGGAAGCGAACGGAGAAAATAGGGACGATTTCATTCATAAGTGGCTGTAA

Coding sequence (CDS)

ATGTTTCATGCACGAGAAATGAAATCAATGGAAAAGCAACTTTTTGTTTTGTTGATCGTGTTGCCATTAGTAATACTTGAGCCAGTCAAGGCAGCCGAGTTTACTAAATGGCATATCCACATCGTGAACGGACTAAGCAATGGTCAAATGTTGATGGTGCACTGCAAATCTAAGGATGTTGATCTAGGCGTACACAATGTCAGCGTTGGAGCTGAATTTGATTGGGTTTTTCGTGTCAACCTTATGATGACTACACTTTTTTGGTGTACTTCGCAAAAGCCAAATGCTCAATCTGTTTCCTTTGAGGCTTTTTGGGTCGAGAGTACATCTATTTGGCTCTATGATCATTGTTATGAGACTAACTGTATTTGGATCGCAAGAGATGATGGAATCTATTTGGAAGCGAACGGAGAAAATAGGGACGATTTCATTCATAAGTGGCTGTAA

Protein sequence

MFHAREMKSMEKQLFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDDGIYLEANGENRDDFIHKWL

Homology

[Close]

BLAST of Sed0000623 vs. NCBI nr
Match: XP_038896594.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 204.9 bits (520), Expect = 4.8e-49
Identity = 92/142 (64.79%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 6   EMKSMEKQLFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVH 65
           EM+ M KQ  VL  VL L +L+  KAAE  KW IH+VNGLSNGQ+L VHCKSKD DLG H
Sbjct: 2   EMRCMTKQCVVLFFVLCLAMLDENKAAELAKWQIHVVNGLSNGQILFVHCKSKDNDLGEH 61

Query: 66  NVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIWI 125
            +SVG EF+W FRVN   TTLFWC  QKPNAQ  SF+AFW+ESTS+WLY+ CY++NCIWI
Sbjct: 62  KLSVGNEFNWRFRVNFWNTTLFWCYLQKPNAQHSSFQAFWIESTSVWLYNMCYDSNCIWI 121

Query: 126 ARDDGIYLEANGENRDDFIHKW 148
           A+DDG+YL+ N  + D  IHKW
Sbjct: 122 AKDDGVYLKDNTNHEDVLIHKW 143

[Close]

BLAST of Sed0000623 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 191.4 bits (485), Expect = 5.4e-45
Identity = 87/148 (58.78%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 1   MFHAREMKSMEKQLFVLLIVLPLVILEPVKA-AEFTKWHIHIVNGLSNGQMLMVHCKSKD 60
           M  A  ++S +K   V L+VL LVILEP++A +E  KW IH+VNGLSNGQ L VHCKSKD
Sbjct: 1   MSQAMGVRSTKKHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKD 60

Query: 61  VDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYE 120
            DLG HN++ G EF+W FRVNL  TTLFWC   KP+ +S SF+ FWVE  SIWL+  CY 
Sbjct: 61  NDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYH 120

Query: 121 TNCIWIARDDGIYLEANGENRDDFIHKW 148
           +NCIW A+DDGIYL  N   RD  +H+W
Sbjct: 121 SNCIWTAKDDGIYLRDNPVQRDILVHEW 148

[Close]

BLAST of Sed0000623 vs. NCBI nr
Match: XP_031745090.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 7.1e-45
Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 6   EMKSMEKQLFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVH 65
           E+  M+KQ  VLL VL L ILE  KA E  KWHIH+VNGLSNGQ+L+ HCKSKD DLG  
Sbjct: 8   EIGHMKKQCVVLLFVLCLAILEETKAVELEKWHIHVVNGLSNGQILLAHCKSKDNDLGER 67

Query: 66  NVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIWI 125
            +  G EF+W FRVN   TTLFWC  QKPN Q  SFE+FW+ES S+WLY  C+E NCIW 
Sbjct: 68  RLIAGTEFNWRFRVNFWNTTLFWCYLQKPNGQHSSFESFWIESRSVWLYTMCFEKNCIWT 127

Query: 126 ARDDGIYLEANGE-NRDDFIHKW 148
           A+DDGIYL+ N + ++D  IHKW
Sbjct: 128 AKDDGIYLKDNFDTHKDILIHKW 150

[Close]

BLAST of Sed0000623 vs. NCBI nr
Match: XP_016902699.1 (PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 1.0e-43
Identity = 85/143 (59.44%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 7   MKSMEKQ--LFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGV 66
           M+SM+    +F  L VL L I++P KA    +WHIHIVNGLSN Q L VHC+SKD DLG 
Sbjct: 29  MRSMKNHFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDDDLGK 88

Query: 67  HNVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIW 126
             +SVG EF+W F++N   TTLFWC  QKPNA+SVSFEAFWVE  SIWL+  C+++NCIW
Sbjct: 89  RYLSVGTEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCFKSNCIW 148

Query: 127 IARDDGIYLEANGENRDDFIHKW 148
            A+DDGIYL+ N  NRD  +H W
Sbjct: 149 TAKDDGIYLKDNPANRDALVHNW 171

[Close]

BLAST of Sed0000623 vs. NCBI nr
Match: XP_022143829.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-43
Identity = 80/138 (57.97%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 10  MEKQLFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSV 69
           ++K   V+L+ L L I+EP  + E  +W+IH+VNGL NG++L VHCKS+D DLG  N+  
Sbjct: 6   LKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGRLLFVHCKSRDDDLGEQNLYD 65

Query: 70  GAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDD 129
           GAEF W FRVN++ TTLFWC  +KP+AQSVSF+AFWVE TSIWL+  CY+ NCIW A+DD
Sbjct: 66  GAEFSWTFRVNVIDTTLFWCFLRKPDAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDD 125

Query: 130 GIYLEANGENRDDFIHKW 148
           G+YL  N   RD  +HKW
Sbjct: 126 GVYLRDNPVQRDVLVHKW 143

[Close]

BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.1e-19
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 33  EFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQ 92
           + ++W + +VNGL+ G+ L +HCKSK+ DLG  N+     F W F  N++ +T FWC   
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 96

Query: 93  KPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDDGIYLEANGENRDDFIHKW 148
           K N   ++   FW     + L+  C   NCIW A+ DG+YL  +    D    KW
Sbjct: 97  KDNGH-MNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-18
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 33  EFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQ 92
           + ++W + + NGL+ G+ L +HCKSK+ DLG  N+     F W F  N++ +TLFWC   
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMS 96

Query: 93  KPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDDGIYLEANGENRDDFIHKW 148
           K +   ++ + FW     + L+  C   NC+W A++DG+YL  +    D    KW
Sbjct: 97  KDDGH-MNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 34/102 (33.33%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 47  NGQMLMVHCKSKDVDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWV 106
           N  +L VHCKS+D D G H +  G  + W+F VN M +TL++C   +   +   F+ +  
Sbjct: 40  NDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKA 99

Query: 107 ESTSIWLYDHCYETNCIWIARDDGIYLEANGENRDDFIHKWL 149
              S      C   NC W A++DGIY       ++   +KWL
Sbjct: 100 VRDS----SRC--RNCTWEAKEDGIYGYGEIPKKNPLFYKWL 135

[Close]

BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09
Identity = 40/137 (29.20%), Postives = 63/137 (45.99%), Query Frame = 0


Query: 16  VLLIVLPLVILEPV---KAAEFTKWHI-HIVNGLSNGQMLMVHCKSKDVDLGVHNVSVGA 75
           V ++V+ L+  E +   +A E  + H+  +     N  +L +HCKS+D DLG H ++ G 
Sbjct: 19  VSIVVISLICSEALQIQEAKEPIRGHLTRVTIQNDNDYLLGIHCKSRDDDLGFHILAKGE 78

Query: 76  EFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDDGI 135
            F W F VN   +TL++C   +   +   FE +          D     NC W A  DGI
Sbjct: 79  LFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANR------DFYRCANCTWKAEKDGI 138

Query: 136 YLEANGENRDDFIHKWL 149
           Y  +    +    + WL
Sbjct: 139 YGYSEDPVKGYLFYNWL 149

[Close]

BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 44/142 (30.99%), Postives = 59/142 (41.55%), Query Frame = 0


Query: 7   MKSMEKQLFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHN 66
           MK+  K   VL I+L  VI        F K  + + N +S    L + C+SKD DLG H 
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHGYNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEHL 60

Query: 67  VSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVES-TSIWLYDHCYETNCIWI 126
           +  G  F W FR +   TTLF C     N         W ++  S     HCY  +C W 
Sbjct: 61  LLHGQAFLWKFRPSWFRTTLFTCKFLWNN------NVKWFDTYRSDRDQGHCY--SCNWS 120

Query: 127 ARDDGIYLEANGENRDDFIHKW 148
              D   +  N   + D  + W
Sbjct: 121 INADSACISGNFNKKFDRCYPW 134

[Close]

BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45
Identity = 87/148 (58.78%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 1   MFHAREMKSMEKQLFVLLIVLPLVILEPVKA-AEFTKWHIHIVNGLSNGQMLMVHCKSKD 60
           M  A  ++S +K   V L+VL LVILEP++A +E  KW IH+VNGLSNGQ L VHCKSKD
Sbjct: 1   MSQAMGVRSTKKHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKD 60

Query: 61  VDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYE 120
            DLG HN++ G EF+W FRVNL  TTLFWC   KP+ +S SF+ FWVE  SIWL+  CY 
Sbjct: 61  NDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYH 120

Query: 121 TNCIWIARDDGIYLEANGENRDDFIHKW 148
           +NCIW A+DDGIYL  N   RD  +H+W
Sbjct: 121 SNCIWTAKDDGIYLRDNPVQRDILVHEW 148

[Close]

BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 5.0e-44
Identity = 85/143 (59.44%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 7   MKSMEKQ--LFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGV 66
           M+SM+    +F  L VL L I++P KA    +WHIHIVNGLSN Q L VHC+SKD DLG 
Sbjct: 29  MRSMKNHFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDDDLGK 88

Query: 67  HNVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIW 126
             +SVG EF+W F++N   TTLFWC  QKPNA+SVSFEAFWVE  SIWL+  C+++NCIW
Sbjct: 89  RYLSVGTEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCFKSNCIW 148

Query: 127 IARDDGIYLEANGENRDDFIHKW 148
            A+DDGIYL+ N  NRD  +H W
Sbjct: 149 TAKDDGIYLKDNPANRDALVHNW 171

[Close]

BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.1e-43
Identity = 80/138 (57.97%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 10  MEKQLFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSV 69
           ++K   V+L+ L L I+EP  + E  +W+IH+VNGL NG++L VHCKS+D DLG  N+  
Sbjct: 6   LKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGRLLFVHCKSRDDDLGEQNLYD 65

Query: 70  GAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDD 129
           GAEF W FRVN++ TTLFWC  +KP+AQSVSF+AFWVE TSIWL+  CY+ NCIW A+DD
Sbjct: 66  GAEFSWTFRVNVIDTTLFWCFLRKPDAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDD 125

Query: 130 GIYLEANGENRDDFIHKW 148
           G+YL  N   RD  +HKW
Sbjct: 126 GVYLRDNPVQRDVLVHKW 143

[Close]

BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.5e-43
Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = 0


Query: 12  KQLFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSVGA 71
           K   V L V  L I+E ++A   +KW IH+ N LSN QML VHCKSK+ DLG HN+SVG 
Sbjct: 7   KHFLVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGT 66

Query: 72  EFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDDGI 131
           EF+W FRVN+  TTL+WC  QKPN QSVSF+AFWVE  SIWLY  C E+NC W A+DDGI
Sbjct: 67  EFNWRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGI 126

Query: 132 YLEANGENRDDFIHKW 148
           YL  N + RD F+HKW
Sbjct: 127 YLRNNPDGRDVFVHKW 142

[Close]

BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A5A7VL75 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001560 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34
Identity = 73/143 (51.05%), Postives = 98/143 (68.53%), Query Frame = 0


Query: 8   KSMEKQLFVLLIVLPLVILEPVKAA--EFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVH 67
           + M   + +LL+++ + +++P  A      KW IH+VNGL+N + L+VHCKSKD DLG+H
Sbjct: 4   EKMNLVVVILLVLVAVAVVQPCTAVPLPLPKWRIHVVNGLNN-ETLLVHCKSKDDDLGIH 63

Query: 68  N-VSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIW 127
           N VS G EF W F+VN   TTLFWC  QKPN  SVSFE+FWVE +  WL   C+  +CIW
Sbjct: 64  NLVSKGEEFQWTFKVNFFGTTLFWCYLQKPNF-SVSFESFWVEKSHPWLNSRCFHNDCIW 123

Query: 128 IARDDGIYLEANGENRDDFIHKW 148
           IA+DD +YL  N +N D+ IH+W
Sbjct: 124 IAKDDAVYLRNNLDNVDERIHEW 144

[Close]

BLAST of Sed0000623 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 95.9 bits (237), Expect = 2.9e-20
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 33  EFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQ 92
           + ++W + +VNGL+ G+ L +HCKSK+ DLG  N+     F W F  N++ +T FWC   
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 96

Query: 93  KPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDDGIYLEANGENRDDFIHKW 148
           K N   ++   FW     + L+  C   NCIW A+ DG+YL  +    D    KW
Sbjct: 97  KDNGH-MNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Sed0000623 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 92.4 bits (228), Expect = 3.2e-19
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 33  EFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQ 92
           + ++W + + NGL+ G+ L +HCKSK+ DLG  N+     F W F  N++ +TLFWC   
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMS 96

Query: 93  KPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDDGIYLEANGENRDDFIHKW 148
           K +   ++ + FW     + L+  C   NC+W A++DG+YL  +    D    KW
Sbjct: 97  KDDGH-MNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Sed0000623 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 72.4 bits (176), Expect = 3.4e-13
Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 0


Query: 14  LFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSVGAEF 73
           LF+  IV+ L I       E  +  + + N L + ++L VHC+SKD DLG H + +G ++
Sbjct: 4   LFIFSIVIGLCIGVSNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDY 63

Query: 74  DWVFRVNLMMTTLFWC-TSQKPNAQS----VSFEAFWVESTSIWLYDHCYETNCIWIARD 133
           ++ F  N+  TT F C   Q PN +     V++E  W ++          E +C WI R+
Sbjct: 64  EFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETSWSKA---------LEASCKWIGRE 123

Query: 134 DGIYLEANG 138
           DGIY   +G
Sbjct: 124 DGIYFSQDG 123

[Close]

BLAST of Sed0000623 vs. TAIR 10
Match: AT2G06090.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 64.3 bits (155), Expect = 9.3e-11
Identity = 47/128 (36.72%), Postives = 67/128 (52.34%), Query Frame = 0


Query: 14  LFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLS-NGQMLMVHCKSKDVDLGVHNVSVGAE 73
           LFVLLI++ L +     +  + K  +H  N  S N  +L VHCKSKD DLG+H V+   E
Sbjct: 4   LFVLLIIIALSVGSNNGSKLWPKNQLHFRNSFSRNYDVLTVHCKSKDDDLGIHTVARSYE 63

Query: 74  FDWVFRVNLMMTTLFWCTSQK--PNAQSVSFEAF-----WVESTSIWLYDHCYETNCIWI 133
           +++ F  ++   T F+CT      +  SV+F A+     +V ST +           IW 
Sbjct: 64  YNFKFEDSVFGRTEFFCTLMHGVGSKYSVTFTAYKAKPAFVASTGVIK---------IWD 122

[Close]

BLAST of Sed0000623 vs. TAIR 10
Match: AT1G26798.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 61.6 bits (148), Expect = 6.1e-10
Identity = 44/136 (32.35%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 7   MKSMEKQLFVLLIVLPLVILEPVKAAE----------FTKWHIHIVNGLSNGQMLMVHCK 66
           M S+    F+ +++  LVI +   A E          F   H+ I+N L+  + L+VHC+
Sbjct: 1   MASLTNHQFISVLITTLVIFKTSLAFENYTSVDVDLPFAPKHVIIINTLNPHERLVVHCR 60

Query: 67  SKDVDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWV--ESTSIWLY 126
           +K  DLGVH +    + D+ FRVNL  TT + CT   P   + +F+ F V  +  S    
Sbjct: 61  NKGKDLGVHALEPQEQIDFRFRVNLRRTTTYTCTFSWP-GNAKTFDIFRVDRDDNSKSTC 120

Query: 127 DHCYETNCIWIARDDG 131
             C E  CIW   + G
Sbjct: 121 GICRE--CIWYICETG 133

The following BLAST results are available for this feature:

BLAST of Sed0000623 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896594.1	4.8e-49	64.79	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_022143772.1	5.4e-45	58.78	S-protein homolog 74-like [Momordica charantia]	[more]
XP_031745090.1	7.1e-45	61.54	S-protein homolog 1-like [Cucumis sativus]	[more]
XP_016902699.1	1.0e-43	59.44	PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]	[more]
XP_022143829.1	2.3e-43	57.97	S-protein homolog 74-like [Momordica charantia]	[more]

BLAST of Sed0000623 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	4.1e-19	36.52	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	4.5e-18	34.78	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F2Q9V4	1.2e-10	33.33	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
P0DN92	1.7e-09	29.20	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
P0DN93	1.6e-07	30.99	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]

BLAST of Sed0000623 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRU0	2.6e-45	58.78	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1	[more]
A0A1S4E390	5.0e-44	59.44	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1	[more]
A0A6J1CQH6	1.1e-43	57.97	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1	[more]
A0A6J1CPR8	5.5e-43	61.03	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1	[more]
A0A5A7VL75	2.1e-34	51.05	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00...	[more]

BLAST of Sed0000623 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	2.9e-20	36.52	S-protein homologue 1	[more]
AT4G29035.1	3.2e-19	34.78	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	3.4e-13	33.33	Plant self-incompatibility protein S1 family	[more]
AT2G06090.1	9.3e-11	36.72	Plant self-incompatibility protein S1 family	[more]
AT1G26798.1	6.1e-10	32.35	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 38..147 e-value: 9.6E-27 score: 93.6
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 13..147
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 13..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000623.1	Sed0000623.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity