Moc08g23010 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc08g23010
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Locationchr8: 16787936 .. 16788489 (-)
RNA-Seq ExpressionMoc08g23010
SyntenyMoc08g23010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCCCATAAGCTTGCACCTGAGGATATTTCTGGCACTGCTGCCATTTGGTTATATGTCGTGAAGAACAGGATCATGCCAACTGAACATGACCAGCACATTATTCGGGATCGAGTTCTATTAGTATACGCCATGACGAAGGGATTTCTAATAAACTTTGGGCGACTGATACGGGGAGTAATCCATGAATGTGCAGCTCGGAAAAATGGTAAACTTTTTTTCCCTGGTTTGATCACCTCACTATGTCTTCGTCAAGGTGTCAGGATTCTGGAAGGTTAAATTGAGAGAAAGTTTCCGATGATAGAAGAGCGAAACTTAAGCGACTTTTGGGACATGCGCTTGCTCGGGCGACAGTTCGAGGCGGCTCACCGAATTCTGAAATTCGAGCCTTTAGGGATACTGTTCGACGGTTGGAGCAGAAATTGGAGGTAACCGAAGCAAAGTTGGAGGCCACGAAGCAAAAGTTAGAAATAGTAACACAAGTTACAAGAATGATGCATAAACAGTTAAAGGATGTCATTAGCATTGAGGCGTGGTCGTTTGATCCATGA

mRNA sequence

ATGGGGTCCCATAAGCTTGCACCTGAGGATATTTCTGGCACTGCTGCCATTTGGTTATATGTCGTGAAGAACAGGATCATGCCAACTGAACATGACCAGCACATTATTCGGGATCGAGTTCTATTAGTATACGCCATGACGAAGGGATTTCTAATAAACTTTGGGCGACTGATACGGGGAGTAATCCATGAATGTGCAGCTCGGAAAAATGAGAAAGTTTCCGATGATAGAAGAGCGAAACTTAAGCGACTTTTGGGACATGCGCTTGCTCGGGCGACAGTTCGAGGCGGCTCACCGAATTCTGAAATTCGAGCCTTTAGGGATACTGTTCGACGGTTGGAGCAGAAATTGGAGGTAACCGAAGCAAAGTTGGAGGCCACGAAGCAAAAGTTAGAAATAGTAACACAAGTTACAAGAATGATGCATAAACAGTTAAAGGATGTCATTAGCATTGAGGCGTGGTCGTTTGATCCATGA

Coding sequence (CDS)

ATGGGGTCCCATAAGCTTGCACCTGAGGATATTTCTGGCACTGCTGCCATTTGGTTATATGTCGTGAAGAACAGGATCATGCCAACTGAACATGACCAGCACATTATTCGGGATCGAGTTCTATTAGTATACGCCATGACGAAGGGATTTCTAATAAACTTTGGGCGACTGATACGGGGAGTAATCCATGAATGTGCAGCTCGGAAAAATGAGAAAGTTTCCGATGATAGAAGAGCGAAACTTAAGCGACTTTTGGGACATGCGCTTGCTCGGGCGACAGTTCGAGGCGGCTCACCGAATTCTGAAATTCGAGCCTTTAGGGATACTGTTCGACGGTTGGAGCAGAAATTGGAGGTAACCGAAGCAAAGTTGGAGGCCACGAAGCAAAAGTTAGAAATAGTAACACAAGTTACAAGAATGATGCATAAACAGTTAAAGGATGTCATTAGCATTGAGGCGTGGTCGTTTGATCCATGA

Protein sequence

MGSHKLAPEDISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRGVIHECAARKNEKVSDDRRAKLKRLLGHALARATVRGGSPNSEIRAFRDTVRRLEQKLEVTEAKLEATKQKLEIVTQVTRMMHKQLKDVISIEAWSFDP
Homology
BLAST of Moc08g23010 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia])

HSP 1 Score: 75.9 bits (185), Expect = 3.6e-10
Identity = 53/164 (32.32%), Postives = 78/164 (47.56%), Query Frame = 0

Query: 1    MGSHKLAPEDISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRG 60
            MG   L P DI+  A +W+YVVKNR++PT +D  I R+R ++VY + KG   NFG LIR 
Sbjct: 1218 MGKLSLKPLDINEQATVWMYVVKNRLIPTSYDSSIKRNRAMIVYILVKGVEFNFGELIRN 1277

Query: 61   VIHEC--------AARKNEKVSDDRRAKLKRLLGHALARATVRGGSPNSEIRAFRDTVRR 120
             I  C        AA  N  +       L+++ G+++ R        +S I A     R 
Sbjct: 1278 EIQSCSEKLAGVEAADANVVMPKKPFRSLRKVRGYSIVR------EEDSPITAADPETRG 1337

Query: 121  LEQKLEVTEAKLEATKQKLEIVTQVTRMMHKQLKDVISIEAWSF 157
            +     VT  + +  + K E++    R     LK +   EA SF
Sbjct: 1338 V-----VTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSF 1370

BLAST of Moc08g23010 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida])

HSP 1 Score: 61.6 bits (148), Expect = 6.9e-06
Identity = 31/77 (40.26%), Postives = 42/77 (54.55%), Query Frame = 0

Query: 1   MGSHKLAPEDISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRG 60
           + S KL PE     A +W+Y+VK RI+PT HD+ + RDRV+  Y +  G LI+   LI  
Sbjct: 295 LASSKLLPE-----ARLWVYLVKRRIIPTSHDKTVSRDRVMAAYCIACGILIDVSHLIAA 354

Query: 61  VIHECAARKNEKVSDDR 78
              E A RK  +    R
Sbjct: 355 QAKEAAQRKQRQGKSPR 366

BLAST of Moc08g23010 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-05
Identity = 25/60 (41.67%), Postives = 41/60 (68.33%), Query Frame = 0

Query: 11  ISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRGVIHECAARKN 70
           ++  A +W + +K+R++PT H + + +DR+LL+Y+M  G  IN GR+I   I  CAARK+
Sbjct: 41  LTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKS 100

BLAST of Moc08g23010 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-05
Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 0

Query: 2   GSHKLAPEDISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRGV 61
           G +      ++  A IW + +K+R++PT H + + ++RVLL+Y+M  G  IN GR+I   
Sbjct: 78  GVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSINMGRMIHRE 137

Query: 62  IHECAARKN 71
           I  CAARK+
Sbjct: 138 ICACAARKS 146

BLAST of Moc08g23010 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-05
Identity = 25/68 (36.76%), Postives = 43/68 (63.24%), Query Frame = 0

Query: 2   GSHKLAPEDISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRGV 61
           G++      ++  A +W + +K+R++PT H + + +DR+LL+++M  G  IN GR+I   
Sbjct: 161 GAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSE 220

Query: 62  IHECAARK 70
           I  CAARK
Sbjct: 221 IRACAARK 228

BLAST of Moc08g23010 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.7e-10
Identity = 53/164 (32.32%), Postives = 78/164 (47.56%), Query Frame = 0

Query: 1    MGSHKLAPEDISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRG 60
            MG   L P DI+  A +W+YVVKNR++PT +D  I R+R ++VY + KG   NFG LIR 
Sbjct: 1218 MGKLSLKPLDINEQATVWMYVVKNRLIPTSYDSSIKRNRAMIVYILVKGVEFNFGELIRN 1277

Query: 61   VIHEC--------AARKNEKVSDDRRAKLKRLLGHALARATVRGGSPNSEIRAFRDTVRR 120
             I  C        AA  N  +       L+++ G+++ R        +S I A     R 
Sbjct: 1278 EIQSCSEKLAGVEAADANVVMPKKPFRSLRKVRGYSIVR------EEDSPITAADPETRG 1337

Query: 121  LEQKLEVTEAKLEATKQKLEIVTQVTRMMHKQLKDVISIEAWSF 157
            +     VT  + +  + K E++    R     LK +   EA SF
Sbjct: 1338 V-----VTREQYDELRHKYELLLVTQRATCAFLKKIYGDEAPSF 1370

BLAST of Moc08g23010 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.7e-06
Identity = 25/60 (41.67%), Postives = 41/60 (68.33%), Query Frame = 0

Query: 11  ISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRGVIHECAARKN 70
           ++  A +W + +K+R++PT H + + +DR+LL+Y+M  G  IN GR+I   I  CAARK+
Sbjct: 41  LTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKS 100

BLAST of Moc08g23010 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.8e-06
Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 0

Query: 2   GSHKLAPEDISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRGV 61
           G +      ++  A IW + +K+R++PT H + + ++RVLL+Y+M  G  IN GR+I   
Sbjct: 78  GVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSINMGRMIHRE 137

Query: 62  IHECAARKN 71
           I  CAARK+
Sbjct: 138 ICACAARKS 146

BLAST of Moc08g23010 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.7e-05
Identity = 25/68 (36.76%), Postives = 43/68 (63.24%), Query Frame = 0

Query: 2   GSHKLAPEDISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRGV 61
           G++      ++  A +W + +K+R++PT H + + +DR+LL+++M  G  IN GR+I   
Sbjct: 161 GAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSE 220

Query: 62  IHECAARK 70
           I  CAARK
Sbjct: 221 IRACAARK 228

BLAST of Moc08g23010 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.8e-05
Identity = 24/68 (35.29%), Postives = 43/68 (63.24%), Query Frame = 0

Query: 2   GSHKLAPEDISGTAAIWLYVVKNRIMPTEHDQHIIRDRVLLVYAMTKGFLINFGRLIRGV 61
           G++      ++  A +W + +K+R++PT H + + +DR+LL+++M  G  IN GR+I   
Sbjct: 91  GAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSE 150

Query: 62  IHECAARK 70
           I  CAA+K
Sbjct: 151 IRACAAQK 158

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022154847.13.6e-1032.32LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia][more]
XP_038904385.16.9e-0640.26uncharacterized protein LOC120090747 [Benincasa hispida][more]
PON59596.11.2e-0541.67hypothetical protein PanWU01x14_158080 [Parasponia andersonii][more]
PON50458.12.0e-0539.13hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii][more]
PON46472.13.4e-0536.76hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DMT31.7e-1032.32LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia... [more]
A0A2P5CEY25.7e-0641.67Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... [more]
A0A2P5BNT09.8e-0639.13Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5BCG41.7e-0536.76Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5DXM32.8e-0535.29Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc08g23010.1Moc08g23010.1mRNA