Moc09g15110 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc09g15110
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr9: 12937304 .. 12940374 (+)
RNA-Seq ExpressionMoc09g15110
SyntenyMoc09g15110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTATATATCAAGAGGACTACGGGTGCTCCTCCTCCACTAAAAGCTTTGAAGCCCCAACTTTTTTTGGTATTCTAAGTCAATCAGCTATACATCCTCCTTGCATGTTGGTATGGTACAAATCGATTAGGAATGAGCGTAGCGCAGTAGCTGTTGTTCTTGTGGTCTGTATAGCAGCATCAGTAGAGTAGTGATCTCTTCTCACAACCGTCTATCCATCTTCTTAGTTTAGTTTTCCTGTTGTATGTCTAGCTATCTGTCGCATTATGTTACTGTGTTCCGCGAGCCTCCTTGCTTCCTTAAGCCACCATTCTGGAGTCGAGGTGAGTTGTCGGAGATCTGTTGAGGCGGAGACTCTGTAGTGCCTGAAGAGGGAAAAGAGAGTTCAGTGTTTGCAGCCTTAAAGCCTTAACTTAAAGAAGGGAAGGAAGGCTTTCTTCCCGAACGGTCTTCAGCCTTGGGCTAGACAAGAACTTCGTTGGCAAAATGTACCGGATTTGGCTTCTGCGATCATTGCTGCAGAAAGAATGGTAGATGACATGGAAAAACCTACTCATTCGCACAAACAAAGGGGAACTACCCCAACATATCAGTGTCTCTATAGAGGAGATAGAATGTCTTAGACTGTAAACACTTTTACAGGGTATAACTCTATATACAGGGTAGTGGCAAAAAAGAAATCCCATCTGAAATATTCAGAAGCCGTTCTTCAGCTGTATGTTACTGTGCGCATAGCCTTGCCAGTGACCTCTCATAGTTGTTGTGTTGTATATAGGGGGCCATTCCTATAAGGTGATCCAGCTAACTTAAAGTAAGGGGAAGTACGCCCATTACAGGAAGGTTATATTGGAAAAAAACTGAAAGGATAATGGACAGAACTATACCAGGGTCAGACAGCATCGAAAGTAGAAAAGATGAATAGGATTATTCCTACCTTCAGGATTACTGTAGATGTCAAAATCCCTAAATATTTCACTCTAACGATTATTTCAAAATAAACACAATGTTTCACCGTAATCTTTCTTTAAAGCAGTAGCAGCTGTTGATAATTTGGAAGTTTTCGATATCGTTCATAAAATGAAAAATCTCAGTCTGAATGATCAGAGTTCTAATATTCATAGTCCTAGTAGTAGTAAACCATCTAGTAGTAGTAATCCATCTAGTAATATCTCATTAGTTTCTAAACCTAATATAATGTATTCATCGACTAGCAGAATTATGGAAAGATTTAAATCAATGAAGCATTCGCAGTTTACGCGTCAAGTTATGGATCTTACAAAATTACCATTTATTGATATCCCCAAGACAGTAACGGATCTAACTTCTAATTCAACTAGTTATATTTTATCATTAGGCTTTCGATTTATGCCCGGTCAAAGTGATTTTCTATTAAAAAATCTGAGATTACCTGAGACCTTAGATGGATTAAAAGGGTTAAGAGATCAGCTAGGTCTAACGTTAGCAAAAGATAGTCTTACCAATCGTGGTACCTCAAGTTTGAGGGGTTCTCATCAATACATGCAAAGGCTCTTTGCTCATGAATCGTGTTTTGCTTGAAGCTATAACTTATAATTCAGGATTTTATGGTCGTTTCTTGGTATTGGCACAAATTGGCGTAGGTTGTACAGTATGGTATGGTTTTGTTCCCGGAGATGGTAACATTCCTCCTTTATTAGATGATTCTGTAATATCCTTGTTCTCACCAATAGAGAATTATGAACAATTCTTTTACAATCCGGATTCTTATGTTCACCCAGGATTTTCAAAGATGACATTGATGGAAAACCAAGAAAATACTATATCAGCACTGTCAACAGCCTATACTTCAGAGAAACCATTTCAGGATATCAAAATAGCTATATCTAATAATAACTCTAATCTGCTTTTGGGTATAACCTTAGGTTTGGTAATAGTAGTCTTAATTTCAGTAGGTATTTCTCCAATCGAAACATGATTATGAATATGAAATATGGCATAATTACAAGATCTTACAGTTGTATTAATCCACAGTGTTCGTTAGAAGAGCTTGCATTATCTATTGAAAAATATTACAATGGTCTAACTGATATCTTTTCAGAGTTGACAGTCTCAAGAATGAGGGAGATTCAACATCAAATAAGGACAGGAAAATATACTCTTTCCCCATTTAAACTTAAATTCTTTAAGCAAATAGCTCATATAAATGAAAAAAAACAACTGTTATTATTATCTTATGCATATGCTGCTAGATGATTCCATTATCTACTACGGTATTTTATCTCCAATTCCCGAAGATAGACTTGTTCTTATGGCGCTTGGCGGAATGTTAAATACTAGAATTATAAAATTGAATCTTCTTAATTCGTCTTCCTTGGCTTCAAATTAAGACTAAAAGATTATTATGTACATATTTGTTCTTCGATAGAAGTGCCTATCTCAAGGGTTATAAGTTAGATATGATGAACTCACTTAGAAGAATCAATAAAAAAAATCTTTTGACTAAGCTTGAACCAATAGTATCAAATACTTATATAAATCAATTATTGAAAGAATATCTATATAATAAGATTATTCATGAGGGGGAGGATTATTTCTATATAATGGATGATATTATTCCACCCTTTGGATTTCTAACAGATATACTTCTCAATTTTGCTTTAATAGAATTGGATAATCAATTTCATCAGGTATTTCCAGCCTTCTCGTATACTAGGTATGCTCATGAAGTTCTAGTAACCACTTCCCAGAAAGAGTCTTTGTGTGAATTATTACTTTTTTCACTTTTTGTTTTGATAGTCTCAATTTGAAAGGAAAAATAGTCTCTATTGGACCGGGAGATAATCCTATCCCTAGTCTTCAAGGAGGTCTAATTAGTCTTACCGAAGATGGTAGACTCCTTATAATGGAAAGAGAATAGCATCTATCCTCTTTTGACCGATAGGTATCTTCTACGGTACCGGAGTCTCTGTTGCTGTTCTTGATTATCCCATTTTCTTGATTAAGGTCCAAAGATGATTCTAGAACTTTCAGGATATGTTTTCAGAGGAAGCTGAACAATAAATACGTCCTTTACAGTAAAGTGTCTTATTGA

mRNA sequence

ATGCGTATATATCAAGAGGACTACGGGTGCTCCTCCTCCACTAAAAGCTTTGAAGCCCCAACTTTTTTTGGTATTCTAAGTCAATCAGCTATACATCCTCCTTGCATGTTGGTATGGTACAAATCGATTAGGAATGAGCGTAGCGCAGTAGCTGTTGTTCTTGTGGTCTGTATAGCAGCATCAGTAGACTATCTGTCGCATTATGTTACTGTGTTCCGCGAGCCTCCTTGCTTCCTTAAGCCACCATTCTGGAGTCGAGGATTTTATGGTCGTTTCTTGGTATTGGCACAAATTGGCGTAGGTTGTACAGTATGGTATGGTTTTGTTCCCGGAGATGGTAACATTCCTCCTTTATTAGATGATTCTGTAATATCCTTGTTCTCACCAATAGAGAATTATGAACAATTCTTTTACAATCCGGATTCTTATGTTCACCCAGGATTTTCAAAGATGACATTGATGGAAAACCAAGAAAATACTATATCAGCACTGTCAACAGCCTATACTTCAGAGAAACCATTTCAGGATATCAAAATAGCTATATCTAATAATAACTCTAATCTGCTTTTGGGTATAACCTTAGATATACTTCTCAATTTTGCTTTAATAGAATTGGATAATCAATTTCATCAGGTATTTCCAGCCTTCTCGTATACTAGGTCCAAAGATGATTCTAGAACTTTCAGGATATGTTTTCAGAGGAAGCTGAACAATAAATACGTCCTTTACAGTAAAGTGTCTTATTGA

Coding sequence (CDS)

ATGCGTATATATCAAGAGGACTACGGGTGCTCCTCCTCCACTAAAAGCTTTGAAGCCCCAACTTTTTTTGGTATTCTAAGTCAATCAGCTATACATCCTCCTTGCATGTTGGTATGGTACAAATCGATTAGGAATGAGCGTAGCGCAGTAGCTGTTGTTCTTGTGGTCTGTATAGCAGCATCAGTAGACTATCTGTCGCATTATGTTACTGTGTTCCGCGAGCCTCCTTGCTTCCTTAAGCCACCATTCTGGAGTCGAGGATTTTATGGTCGTTTCTTGGTATTGGCACAAATTGGCGTAGGTTGTACAGTATGGTATGGTTTTGTTCCCGGAGATGGTAACATTCCTCCTTTATTAGATGATTCTGTAATATCCTTGTTCTCACCAATAGAGAATTATGAACAATTCTTTTACAATCCGGATTCTTATGTTCACCCAGGATTTTCAAAGATGACATTGATGGAAAACCAAGAAAATACTATATCAGCACTGTCAACAGCCTATACTTCAGAGAAACCATTTCAGGATATCAAAATAGCTATATCTAATAATAACTCTAATCTGCTTTTGGGTATAACCTTAGATATACTTCTCAATTTTGCTTTAATAGAATTGGATAATCAATTTCATCAGGTATTTCCAGCCTTCTCGTATACTAGGTCCAAAGATGATTCTAGAACTTTCAGGATATGTTTTCAGAGGAAGCTGAACAATAAATACGTCCTTTACAGTAAAGTGTCTTATTGA

Protein sequence

MRIYQEDYGCSSSTKSFEAPTFFGILSQSAIHPPCMLVWYKSIRNERSAVAVVLVVCIAASVDYLSHYVTVFREPPCFLKPPFWSRGFYGRFLVLAQIGVGCTVWYGFVPGDGNIPPLLDDSVISLFSPIENYEQFFYNPDSYVHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDILLNFALIELDNQFHQVFPAFSYTRSKDDSRTFRICFQRKLNNKYVLYSKVSY
Homology
BLAST of Moc09g15110 vs. NCBI nr
Match: XP_022159425.1 (uncharacterized protein LOC111025849 [Momordica charantia])

HSP 1 Score: 225.7 bits (574), Expect = 4.4e-55
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0

Query: 84  WSRGFYGRFLVLAQIGVGCTVWYGFVPGDGNIPPLLDDSVISLFSPIENYEQFFYNPDSY 143
           ++ GFYGRFLVLAQIGVGCTVWYGFVPGDGNIPPLLDDSVISLFSPIENYEQFFYNPDSY
Sbjct: 126 YNSGFYGRFLVLAQIGVGCTVWYGFVPGDGNIPPLLDDSVISLFSPIENYEQFFYNPDSY 185

Query: 144 VHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDILL 199
           VHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITL +++
Sbjct: 186 VHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLGLVI 240

BLAST of Moc09g15110 vs. NCBI nr
Match: CDP17413.1 (unnamed protein product [Coffea canephora])

HSP 1 Score: 176.0 bits (445), Expect = 4.0e-40
Identity = 88/116 (75.86%), Postives = 99/116 (85.34%), Query Frame = 0

Query: 84  WSRGFYGRFLVLAQIGVGCTVWYGFVPGDG-NIPPLLDDSVISLFSPIENYEQFFYNPDS 143
           ++ GFYGRFLVLAQIGVGCTVWYGF PGDG NIP   D S+ SLFSPIENYE FFYNPD 
Sbjct: 182 YNDGFYGRFLVLAQIGVGCTVWYGFTPGDGFNIP--FDASLTSLFSPIENYEPFFYNPDV 241

Query: 144 YVHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDILL 199
           Y+HPGF KMTLMENQ NTISALSTAYT EKPF DIKI  +N+NSNL++GITL +++
Sbjct: 242 YIHPGFQKMTLMENQANTISALSTAYTDEKPFLDIKIP-TNSNSNLIVGITLGLVV 294

BLAST of Moc09g15110 vs. NCBI nr
Match: CBJ23356.1 (hypothetical protein [Beta vulgaris subsp. maritima])

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-24
Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 0

Query: 87  GFYGRFLVLAQIGVGCTVWYGFVPGDG-NIPPLLDDSVISLFSPIENYEQFFYNPDSYVH 146
           G+YGRFLVL Q+GVGCTVWYGFV  DG N+P    +++  LFSPIENY+ FF NPD +V 
Sbjct: 205 GYYGRFLVLVQMGVGCTVWYGFVSSDGMNMP---TEALEPLFSPIENYDAFFTNPDIHVQ 264

Query: 147 PGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDI 197
           PGF+KMTL E  +N +  L+ A+  EKPF DI+  I N N +LL+G++L +
Sbjct: 265 PGFNKMTLAEGVDNPVKPLTQAFAEEKPFIDIE--IPNTNKSLLVGVSLGL 310

BLAST of Moc09g15110 vs. NCBI nr
Match: CAA71807.1 (hypothetical protein [Beta vulgaris subsp. maritima])

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-24
Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 0

Query: 87  GFYGRFLVLAQIGVGCTVWYGFVPGDG-NIPPLLDDSVISLFSPIENYEQFFYNPDSYVH 146
           G+YGRFLVL Q+GVGCTVWYGFV  DG N+P    +++  LFSPIENY+ FF NPD +V 
Sbjct: 205 GYYGRFLVLVQMGVGCTVWYGFVSSDGMNMP---TEALEPLFSPIENYDAFFTNPDIHVQ 264

Query: 147 PGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDI 197
           PGF+KMTL E  +N +  L+ A+  EKPF DI+  I N N +LL+G++L +
Sbjct: 265 PGFNKMTLAEGVDNPVKPLTQAFAEEKPFIDIE--IPNTNKSLLVGVSLGL 310

BLAST of Moc09g15110 vs. NCBI nr
Match: KAG9140582.1 (hypothetical protein Leryth_024569 [Lithospermum erythrorhizon])

HSP 1 Score: 105.5 bits (262), Expect = 6.6e-19
Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 0

Query: 99  GVGCTVWYGFVPGDGNIPPLLDDSVISLFSPIENYEQFFYNPDSYVHPGFSKMTLMENQE 158
           GVGCTVWYGF  GD      +   ++SLFSPIENYEQFFYNP SYV+PGF K+TL+EN  
Sbjct: 81  GVGCTVWYGFHDGD------VMSGLLSLFSPIENYEQFFYNPSSYVYPGFEKITLVEN-H 140

Query: 159 NTISALSTAYTSEKPFQDIKIAISNNNSNLLL--GITLDILL 199
           N +S L+ A+  +KPF +I+I   NN S  ++  GITL +++
Sbjct: 141 NNLSTLANAFADQKPFTEIQIPSCNNISPHIIAGGITLGLVV 175

BLAST of Moc09g15110 vs. ExPASy TrEMBL
Match: A0A6J1DYP8 (uncharacterized protein LOC111025849 OS=Momordica charantia OX=3673 GN=LOC111025849 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.1e-55
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0

Query: 84  WSRGFYGRFLVLAQIGVGCTVWYGFVPGDGNIPPLLDDSVISLFSPIENYEQFFYNPDSY 143
           ++ GFYGRFLVLAQIGVGCTVWYGFVPGDGNIPPLLDDSVISLFSPIENYEQFFYNPDSY
Sbjct: 126 YNSGFYGRFLVLAQIGVGCTVWYGFVPGDGNIPPLLDDSVISLFSPIENYEQFFYNPDSY 185

Query: 144 VHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDILL 199
           VHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITL +++
Sbjct: 186 VHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLGLVI 240

BLAST of Moc09g15110 vs. ExPASy TrEMBL
Match: A0A068VCK2 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00002783001 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-40
Identity = 88/116 (75.86%), Postives = 99/116 (85.34%), Query Frame = 0

Query: 84  WSRGFYGRFLVLAQIGVGCTVWYGFVPGDG-NIPPLLDDSVISLFSPIENYEQFFYNPDS 143
           ++ GFYGRFLVLAQIGVGCTVWYGF PGDG NIP   D S+ SLFSPIENYE FFYNPD 
Sbjct: 182 YNDGFYGRFLVLAQIGVGCTVWYGFTPGDGFNIP--FDASLTSLFSPIENYEPFFYNPDV 241

Query: 144 YVHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDILL 199
           Y+HPGF KMTLMENQ NTISALSTAYT EKPF DIKI  +N+NSNL++GITL +++
Sbjct: 242 YIHPGFQKMTLMENQANTISALSTAYTDEKPFLDIKIP-TNSNSNLIVGITLGLVV 294

BLAST of Moc09g15110 vs. ExPASy TrEMBL
Match: O47882 (Uncharacterized protein orf1 OS=Beta vulgaris subsp. maritima OX=350892 GN=orf1 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.6e-25
Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 0

Query: 87  GFYGRFLVLAQIGVGCTVWYGFVPGDG-NIPPLLDDSVISLFSPIENYEQFFYNPDSYVH 146
           G+YGRFLVL Q+GVGCTVWYGFV  DG N+P    +++  LFSPIENY+ FF NPD +V 
Sbjct: 205 GYYGRFLVLVQMGVGCTVWYGFVSSDGMNMP---TEALEPLFSPIENYDAFFTNPDIHVQ 264

Query: 147 PGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDI 197
           PGF+KMTL E  +N +  L+ A+  EKPF DI+  I N N +LL+G++L +
Sbjct: 265 PGFNKMTLAEGVDNPVKPLTQAFAEEKPFIDIE--IPNTNKSLLVGVSLGL 310

BLAST of Moc09g15110 vs. ExPASy TrEMBL
Match: E8ZCE5 (Uncharacterized protein orf329b OS=Beta vulgaris subsp. maritima OX=350892 GN=orf329b PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.6e-25
Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 0

Query: 87  GFYGRFLVLAQIGVGCTVWYGFVPGDG-NIPPLLDDSVISLFSPIENYEQFFYNPDSYVH 146
           G+YGRFLVL Q+GVGCTVWYGFV  DG N+P    +++  LFSPIENY+ FF NPD +V 
Sbjct: 205 GYYGRFLVLVQMGVGCTVWYGFVSSDGMNMP---TEALEPLFSPIENYDAFFTNPDIHVQ 264

Query: 147 PGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDI 197
           PGF+KMTL E  +N +  L+ A+  EKPF DI+  I N N +LL+G++L +
Sbjct: 265 PGFNKMTLAEGVDNPVKPLTQAFAEEKPFIDIE--IPNTNKSLLVGVSLGL 310

BLAST of Moc09g15110 vs. ExPASy TrEMBL
Match: V9P5B6 (Uncharacterized protein OS=Salvia miltiorrhiza OX=226208 GN=orf302 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.4e-19
Identity = 53/119 (44.54%), Postives = 81/119 (68.07%), Query Frame = 0

Query: 84  WSRGFYGRFLVLAQIGVGCTVWYGFVPGDGNIPPLLDDSVISLFSPIENYEQFFYNPDSY 143
           ++   YGRFLVL Q+G+ CTVWYGF PG     P+  D +  LF+P+E+YE F   PD++
Sbjct: 177 YNNSHYGRFLVLVQLGLRCTVWYGFHPGAELGIPV--DCI--LFNPMESYENFINYPDTH 236

Query: 144 VHPGFSKMTLMENQENTISALSTAYTSEKPFQDIKIAISNNNSNLLLGITLDILLNFAL 203
           V  GF+K+TL+EN++N +  L+  YTSEKPF D+KI  ++ +  + +G+ L I++  +L
Sbjct: 237 VQHGFNKITLVENEDNILPKLAEGYTSEKPFSDVKIPNASGSVFMSVGLGLAIVILLSL 291

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022159425.14.4e-5593.91uncharacterized protein LOC111025849 [Momordica charantia][more]
CDP17413.14.0e-4075.86unnamed protein product [Coffea canephora][more]
CBJ23356.11.4e-2455.86hypothetical protein [Beta vulgaris subsp. maritima][more]
CAA71807.11.4e-2455.86hypothetical protein [Beta vulgaris subsp. maritima][more]
KAG9140582.16.6e-1953.92hypothetical protein Leryth_024569 [Lithospermum erythrorhizon][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DYP82.1e-5593.91uncharacterized protein LOC111025849 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A068VCK21.9e-4075.86Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00002783001 PE=4 ... [more]
O478826.6e-2555.86Uncharacterized protein orf1 OS=Beta vulgaris subsp. maritima OX=350892 GN=orf1 ... [more]
E8ZCE56.6e-2555.86Uncharacterized protein orf329b OS=Beta vulgaris subsp. maritima OX=350892 GN=or... [more]
V9P5B65.4e-1944.54Uncharacterized protein OS=Salvia miltiorrhiza OX=226208 GN=orf302 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc09g15110.1Moc09g15110.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane