Moc05g13470 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g13470
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr5: 10353311 .. 10357500 (-)
RNA-Seq ExpressionMoc05g13470
SyntenyMoc05g13470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGACTTCAAGGTTCACCTTCCCCTTCATCCCTTTGCCCAGGAGTTTCTTGTCGAGGTGAACCTTGCACTGATCCAGCTCGCTCTCAATGGCTGGGGCATCCTCTTGTATTGTTGGATGTCGTGGTGGGAGGCTTGGGGTAGATACTGTCGATGCGGAGTACTTGATTCGTGACTAGTTCCTGTCTATTTACAATGTAAAAAACCTGCCCAAAAATGCTAGCATATTCTACCTGACAGCCAGGTAAGATGTTGAAAAATTGGTCAGGGGCCCTTCTTCTATAAACGACTGGAAAGGGGAATGGTTTATGTCTATGGGGATTGGTTGGCCAAGAACTGCAAGGGTGAGCTGAGCTGTTGAGTTCCTTGCGGCTTCAACAACTTAGATAAAGCTCATCTCCTTGAGTCACTAGCTGACGTTTCAGTGTTGGGTCCTTTTTTACTGACCCTGGCTCCTCGCCACAATTCTCCCTAAGCCCATGTCATGGAGCAACGAGCTGACGCTAGAATATCTTTGGTGGATCCCCAAGAACTGCAAGACAGTTCGACATTCCCTAGCTCTACTGGTGTACGTTACCTTTATGACTGTGGCTTGCATACTGTTGAAGAGGCTGAGGTAGTAGTCAATCAGCGTGACTTTAGCCCTCGGAGGTTGCCAATTCAGGTTAACTCTCCAGCTCACTCTAAAGGTAAGTCATCATCCTTCTTTTATGTCTAATCTCTTTAGCTTGGTGCTAAGGGGTTGTCACTTTTGAAAAGATGCTTCTAGCGTTTCTGGATGGCAGGAAGAGGAAGGCAGTCGAGACAAGTGGTAACTCGACGCCCATCGTGATTGGAGACGATGAGGCATGCGACAAGTTCCCTATTCCCAAAACAACTCTGTCTGATCTAATGATTGAAGCATCTCCCATCCAGGTGGTGCACGCCTCGTCACCAACGAAGAAGAATAATGAGGAGGAGGAGAAGAAGACCCAGAAAGATTCAGAGCCAACCGAGCAGAAGAGCTCGGCGAATGCTGGGTTGGCCACATCTTCTAGTGCAAGAATCAATGCCTACACCACTCTGAACCAGATCGGCGAAGTGATTGACTTCAACCTGCCATTCCGAACTCATCCTACGTTGGAGATTGTCAATGCGTTGTCTTGCCGCATAGAATGCGTGAGCTCGGAGCGCACTCTCACGTACACTAGGTCCCCCATTAAGATTTCTGGGGAACTTTCCGTCACCATTGATTACGCTGCTGAGGTACGTACATCGCCTGCGCAATTTTTCTCTATTTTCGGATCTTGTACCTAACTCGTTTACTTTCAGGCACACAATCTTCTTGCACCTCTACCTTAATTGATAAGAGGTTGCGTGCTTATGTGCTTATGTTAAAGATTGTATTTTATGTGCTATGTCTAAGCTACATCCCATATTAACTCTCTATTAAGCACTTAACTTAACTCTTTCAGTATTAGGCTTCAAGTTAGCAAAATATCTTAGTGGTCAACTAAAGAAATTGCTCGAGAAAACATTTTAAGGAGTTAACCAGGTAACTCCAAGCACAACCTAGATCTTTTCTCTCATGTTATATTTTTAATAAATTTTCCTAAGGCATTTTGTAAAATCAAACATACCTGGAATCGATCTTCTAAGAGCAAAAGAAATCAATCAAGAAGAATCAACACAGAAATTAAAGTGGTTCCACCAATTCGATGTACATCCATTGTCCAATTCGATCTCCTTCCTTTATTCAATTGAATCGAGTAGCAAAAATAAAAACAAGAACAAGAGCTGCACCCTCACCAACCCAAGAGCATTCTCTCCCAAACTCTCTCTTGAACATTATTCCACTCACACTCTGTTTTTATTCAGTTTTCAATATCAGTGCCACTCCTTTTACACCCACGTAAATACATAACAAAAGAATAAAGAATAATATGAGCTGGAAGACTTCACATGAGCTAGTAGAAAAATGTCAAGCTGGAAAATTCTTGAGTATAAAGCTGCTGACATGTCAATATCCACAAATCACCCTCATGACACTTCAGCAAAAAATATCAAAAAACATAAAGGCTAAGAAATCTGAACTAGACTATAGAAGCAAAAAGTGAATCAGCCAATGCCTATTTTTAATAGGCAGCAGAAATATAACAATCTTGCATTTGACATTGATTTTGTAAGCATATCAGCAGGATTATCCACAGATTGAATCTTCTTTAGTGTAACTTGTTTGGCTGCTACTGTTTCTCTAACATAATGATATTTTATATCAATATGTTTAGTTCGATCATGAAACATCTAGTTCTTTGTCAAAGCAATAACACTTTGACTATCACAATATATATATATGGATGAACATCATAACCAAGCAAGTCATTAACTAAACCAGACAAACAAACAGCCTCTTTCAAAGAATCAGCAATAGCTATATACTCATACTCAATTGTTGACAAAGCAACCACAGATTGAAGAGATGATCGCCAGCTAATAGTATTTCTAAAAAGAGTAAAAACATACCCGAATGTAGATCTCTTTTTGTCAAAGTCTGCTGCAAAATCAACATCAACAAATCTGAATTTCAGGGCAATCATCAAATTTTGAATACACTAAACCATATTTGTGACTTGTCTTAAAAAACCGAAGCACCCATTTTACTGCTTCCCAGTGAGTTTTTCCTGAATTACTCATGAGTCGACTCACAACACTCATTGCAAAAGCAATGTCAGGTCGAGTACAAATCAACCCATACATCAAACTACCAACAACATTTGAATATGGAATTAGAGCCATCTGTTTTAATTCTGCATCAGACTTGGGTGACTAATCTTTGGACAAACAGAAATGTTAAGCAACTGGTACCTTAACTCCTTTGGCATTTTCCATGTTAAACCTTTTAACAACCTTTCCAAGATAGTCCTTCTGAGCCAAAAATAGAGTATTCTTAGCTCGATTCCTTTGAATTTCCATTCCAAGTATTTTTCTGTCGGTCCTAAATCTTTCATCTTGAAATTGTGGCTCAACAAACGCTTTAAGTTCTCAATTTGTGAAGATTGTTGAGAAGCTATTAACATTCATCTACATAAAGTAGAAGATATACTGACACTTCCTTGGACATTCTCTTGATATAAACACAGATGTCATATATGCTTCTTCTAAAATTACTTTTTAACATGAAACTATCAAAATGTTTATACCACTAGCGAGGTGATTGTTACAATCCATACAATGAACGTTACAAGAAGCAAACTTGATCCTCCTTACCTTTGTTAACAAAACCAGGGAGTTGGTGCATATATATCTTTTCTTCTAAATCTCCATGAGGAAAAGTTGTAGTAACATCTGTTTGCTCAAGCTCAAGGTTAAATTGAACTACTAATGACAGTAGTACTCGAATAGAAGTATGACGTACCACTGGAGAAAAAATCTCATTATAGTCAACTCCTTGTTGTTGAGTAAACCCCTTCGCTACCAACCTAGCTTTATATCTAGGTTTCTCTCCTTTAATTCCTTACTCGAAAAATCCAGCGACAATCTACCAATTTCTGATCTGCTGGTTTATCAACTAGTATCCAAGTGTCATTGTTATACAATGAAGTCATCTCATTGTTTATTGCTTCCAACCATAAATACTTATCAACACTTTTAATTGCTTCATCAAAAGAATTAGGTTCTAAACCATTCAAGTTATCACTCGGGCCACTTAACTCTTCCTTTTCACAATTTAAAGAGTACATAACCACATCTGCTTCATAACGAGTTGGAGGCCTAATAGTTCTCCTCTTCCTATCTCTTGTTGGTTGATAATTCTCCAAAGAATTTTGTTCAACATGAGAACTATTATAATGCATAACATCAGATCTCTAAAGTCATTTGGAGAGGGTGGAATTTGATATTGGTCATTAGTATCTACTGCATTACCTGCTGTTGATGGTGTGCTTGCACCTGAAGAAGATGTGTATTGCTGATTATCAAGATCAACATGCTCAACATTCTGCTCATCATTTCCTGTTACTACACCAGATGAAGATGCACCAGAAGAAGAAAAATTGTGCTACTGTACACGAGTTCCCTCTGTACACGTTTTCACCTAGAGGTAGTGCGACGGCAACAACTGGTGCAACAGCGGCAACGAATGGTAGTGCGATACTGATTGAGTTGAGAGAGGAGAGGAAGAGAGAGAGAGAATTAGTGTTTTTGGTTTAA

mRNA sequence

ATGTTTGACTTCAAGGTTCACCTTCCCCTTCATCCCTTTGCCCAGGAGTTTCTTGTCGAGGTGAACCTTGCACTGATCCAGCTCGCTCTCAATGGCTGGGGCATCCTCTTGTATTGTTGGATGTCGTGGTGGGAGGCTTGGGGTAGATACTGTCGATGCGGAGGGCCCTTCTTCTATAAACGACTGGAAAGGGGAATGGTTTATGTCTATGGGGATTGGTTGGCCAAGAACTGCAAGGCCCATGTCATGGAGCAACGAGCTGACGCTAGAATATCTTTGGTGGATCCCCAAGAACTGCAAGACAGTTCGACATTCCCTAGCTCTACTGGTGTACGTTACCTTTATGACTGTGGCTTGCATACTGTTGAAGAGGCTGAGGTAGTAGTCAATCAGCGTGACTTTAGCCCTCGGAGGTTGCCAATTCAGGTTAACTCTCCAGCTCACTCTAAAGCGTTTCTGGATGGCAGGAAGAGGAAGGCAGTCGAGACAAGTGGTAACTCGACGCCCATCGTGATTGGAGACGATGAGGCATGCGACAAGTTCCCTATTCCCAAAACAACTCTGTCTGATCTAATGATTGAAGCATCTCCCATCCAGGTGGTGCACGCCTCGTCACCAACGAAGAAGAATAATGAGGAGGAGGAGAAGAAGACCCAGAAAGATTCAGAGCCAACCGAGCAGAAGAGCTCGGCGAATGCTGGGTTGGCCACATCTTCTAGTGCAAGAATCAATGCCTACACCACTCTGAACCAGATCGGCGAAGTGATTGACTTCAACCTGCCATTCCGAACTCATCCTACGTTGGAGATTGTCAATGCGTTGTCTTGCCGCATAGAATGCGTGAGCTCGGAGCGCACTCTCACGTACACTAGGTCCCCCATTAAGATTTCTGGGGAACTTTCCGTCACCATTGATTACGCTGCTGAGATGAAGATGCACCAGAAGAAGAAAAATTGTGCTACTGTACACGAGTTCCCTCTGTACACGTTTTCACCTAGAGGTAGTGCGACGGCAACAACTGGTGCAACAGCGGCAACGAATGGTAGTGCGATACTGATTGAGTTGAGAGAGGAGAGGAAGAGAGAGAGAGAATTAGTGTTTTTGGTTTAA

Coding sequence (CDS)

ATGTTTGACTTCAAGGTTCACCTTCCCCTTCATCCCTTTGCCCAGGAGTTTCTTGTCGAGGTGAACCTTGCACTGATCCAGCTCGCTCTCAATGGCTGGGGCATCCTCTTGTATTGTTGGATGTCGTGGTGGGAGGCTTGGGGTAGATACTGTCGATGCGGAGGGCCCTTCTTCTATAAACGACTGGAAAGGGGAATGGTTTATGTCTATGGGGATTGGTTGGCCAAGAACTGCAAGGCCCATGTCATGGAGCAACGAGCTGACGCTAGAATATCTTTGGTGGATCCCCAAGAACTGCAAGACAGTTCGACATTCCCTAGCTCTACTGGTGTACGTTACCTTTATGACTGTGGCTTGCATACTGTTGAAGAGGCTGAGGTAGTAGTCAATCAGCGTGACTTTAGCCCTCGGAGGTTGCCAATTCAGGTTAACTCTCCAGCTCACTCTAAAGCGTTTCTGGATGGCAGGAAGAGGAAGGCAGTCGAGACAAGTGGTAACTCGACGCCCATCGTGATTGGAGACGATGAGGCATGCGACAAGTTCCCTATTCCCAAAACAACTCTGTCTGATCTAATGATTGAAGCATCTCCCATCCAGGTGGTGCACGCCTCGTCACCAACGAAGAAGAATAATGAGGAGGAGGAGAAGAAGACCCAGAAAGATTCAGAGCCAACCGAGCAGAAGAGCTCGGCGAATGCTGGGTTGGCCACATCTTCTAGTGCAAGAATCAATGCCTACACCACTCTGAACCAGATCGGCGAAGTGATTGACTTCAACCTGCCATTCCGAACTCATCCTACGTTGGAGATTGTCAATGCGTTGTCTTGCCGCATAGAATGCGTGAGCTCGGAGCGCACTCTCACGTACACTAGGTCCCCCATTAAGATTTCTGGGGAACTTTCCGTCACCATTGATTACGCTGCTGAGATGAAGATGCACCAGAAGAAGAAAAATTGTGCTACTGTACACGAGTTCCCTCTGTACACGTTTTCACCTAGAGGTAGTGCGACGGCAACAACTGGTGCAACAGCGGCAACGAATGGTAGTGCGATACTGATTGAGTTGAGAGAGGAGAGGAAGAGAGAGAGAGAATTAGTGTTTTTGGTTTAA

Protein sequence

MFDFKVHLPLHPFAQEFLVEVNLALIQLALNGWGILLYCWMSWWEAWGRYCRCGGPFFYKRLERGMVYVYGDWLAKNCKAHVMEQRADARISLVDPQELQDSSTFPSSTGVRYLYDCGLHTVEEAEVVVNQRDFSPRRLPIQVNSPAHSKAFLDGRKRKAVETSGNSTPIVIGDDEACDKFPIPKTTLSDLMIEASPIQVVHASSPTKKNNEEEEKKTQKDSEPTEQKSSANAGLATSSSARINAYTTLNQIGEVIDFNLPFRTHPTLEIVNALSCRIECVSSERTLTYTRSPIKISGELSVTIDYAAEMKMHQKKKNCATVHEFPLYTFSPRGSATATTGATAATNGSAILIELREERKRERELVFLV
Homology
[Close]
BLAST of Moc05g13470 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 57.0 bits (136), Expect = 4.0e-04
Identity = 61/234 (26.07%), Postives = 87/234 (37.18%), Query Frame = 0 

Query: 1   MFDFKVHLPLHPFAQEFLVEVNLALIQLALNGWGILLYCWMSWW---------------- 60
           MF++ + LPLHPF QEFL    LA  Q+A NGWG++    + +W                
Sbjct: 94  MFEYGLRLPLHPFVQEFLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQ 153

Query: 61  -----------EAWGRYCRCG---------GPFFYKRLERGMVYVYGDWLAKNCKAHV-- 120
                      +  GR+  C          GP   K   R   Y  G+WLAK+       
Sbjct: 154 LLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFF 213

Query: 121 -MEQRADARISLVDPQELQDSS---------TFPSSTGVRYLYDCGLHTVEEAEVVVNQR 174
            +  R    +S+    EL  +S          FP    V      G    +E  +     
Sbjct: 214 DVPTRFGNLVSIRPVPELTQASFDTLKYYKERFPRGRKV------GTLVTDELLLESGLL 273

[Close]
BLAST of Moc05g13470 vs. NCBI nr
Match: XP_022144034.1 (uncharacterized protein LOC111013826 [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 6.8e-04
Identity = 61/234 (26.07%), Postives = 86/234 (36.75%), Query Frame = 0 

Query: 1   MFDFKVHLPLHPFAQEFLVEVNLALIQLALNGWGILLYCWMSWW---------------- 60
           MF++ + LPLHPF QEFL    LA  Q+A NGWG++    + +W                
Sbjct: 1   MFEYGLRLPLHPFVQEFLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELLDVDQ 60

Query: 61  -----------EAWGRYCRCG---------GPFFYKRLERGMVYVYGDWLAKNCKAHV-- 120
                      +  GR+  C          GP   K   R   Y  G+WLAK+       
Sbjct: 61  LLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFF 120

Query: 121 -MEQRADARISLVDPQELQDSS---------TFPSSTGVRYLYDCGLHTVEEAEVVVNQR 174
            +  R    +S+    EL  +S          FP    V      G    +E  +     
Sbjct: 121 DVPTRFGNLVSIRPVPELTQASFDTLKYYKERFPRGRKV------GTLVTDELLLESGLL 180

[Close]
BLAST of Moc05g13470 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-04
Identity = 61/234 (26.07%), Postives = 87/234 (37.18%), Query Frame = 0 

Query: 1   MFDFKVHLPLHPFAQEFLVEVNLALIQLALNGWGILLYCWMSWW---------------- 60
           MF++ + LPLHPF QEFL    LA  Q+A NGWG++    + +W                
Sbjct: 94  MFEYGLRLPLHPFVQEFLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQ 153

Query: 61  -----------EAWGRYCRCG---------GPFFYKRLERGMVYVYGDWLAKNCKAHV-- 120
                      +  GR+  C          GP   K   R   Y  G+WLAK+       
Sbjct: 154 LLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFF 213

Query: 121 -MEQRADARISLVDPQELQDSS---------TFPSSTGVRYLYDCGLHTVEEAEVVVNQR 174
            +  R    +S+    EL  +S          FP    V      G    +E  +     
Sbjct: 214 DVPTRFGNLVSIRPVPELTQASFDTLKYYKERFPRGRKV------GTLVTDELLLESGLL 273

[Close]
BLAST of Moc05g13470 vs. ExPASy TrEMBL
Match: A0A6J1CR42 (uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013826 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.3e-04
Identity = 61/234 (26.07%), Postives = 86/234 (36.75%), Query Frame = 0 

Query: 1   MFDFKVHLPLHPFAQEFLVEVNLALIQLALNGWGILLYCWMSWW---------------- 60
           MF++ + LPLHPF QEFL    LA  Q+A NGWG++    + +W                
Sbjct: 1   MFEYGLRLPLHPFVQEFLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSEEAELLDVDQ 60

Query: 61  -----------EAWGRYCRCG---------GPFFYKRLERGMVYVYGDWLAKNCKAHV-- 120
                      +  GR+  C          GP   K   R   Y  G+WLAK+       
Sbjct: 61  LLACFEAKRIAKKPGRFYMCARKGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFF 120

Query: 121 -MEQRADARISLVDPQELQDSS---------TFPSSTGVRYLYDCGLHTVEEAEVVVNQR 174
            +  R    +S+    EL  +S          FP    V      G    +E  +     
Sbjct: 121 DVPTRFGNLVSIRPVPELTQASFDTLKYYKERFPRGRKV------GTLVTDELLLESGLL 180

The following BLAST results are available for this feature:
BLAST of Moc05g13470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159063.14.0e-0426.07uncharacterized protein LOC111025502, partial [Momordica charantia][more]
XP_022144034.16.8e-0426.07uncharacterized protein LOC111013826 [Momordica charantia][more]
BLAST of Moc05g13470 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc05g13470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXS51.9e-0426.07uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1CR423.3e-0426.07uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
BLAST of Moc05g13470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..224

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g13470.1Moc05g13470.1mRNA