Lag0042186.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATGATCCTCTCATCGAAAGCTATGGATATCCTCGAGGGGGTGAAGATCAAAGTGATTGCCAAAATCATCAAGGTTGAAAGCCCTCGGAGGAAACTCTCACTTGCAACTTCAAGCATCTGAATTGGATTTCCAGTTGATCATCGAAGAGAACACTGGAAAGGAAAAGCTCAAGATTGATGCTTGGTTTGGCTCTAGGAAACTTCTGTTGCCATTTGCATGACCCTTAGCCATGTTGAGAATCTCATCACTGGTGTCACCAAGGGCTATCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCGATCAATGCTAGCATAACCAACGACAACAAGTCCATGGAGATCTGTAACTTTCTTGGTGAGAAAAAGGTGTGAAAAGTAGATATGCTTGACAGAGTATCTATTGTACAATCTAAGAAGGTCAAAGATGAGTTAGTTTTGGATGGTAACGATATTGAGCTTGTATCTCGGTCTGCTGCCTTGATAAACCAGAAATGCCATTTCAAGAACAAAGATATCTGGAAGTTCCTTGATGGTATTTATGTTAACGCAAAGGGAAATGTTCTCGAAGAAGAGTGA ATGAAGATGATCCTCTCATCGAAAGCTATGGATATCCTCGAGGGGGTGAAGATCAAAGTGATTGCCAAAATCATCAAGGAAACTTCTGTTGCCATTTGCATGACCCTTAGCCATGTTGAGAATCTCATCACTGGTGTCACCAAGGGCTATCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCGATCAATGCTAGCATAACCAACGACAACAAGTCCATGGAGATCTGTAACTTTCTTGGTGAGAAAAAGAAATGCCATTTCAAGAACAAAGATATCTGGAAGTTCCTTGATGGTATTTATGTTAACGCAAAGGGAAATGTTCTCGAAGAAGAGTGA ATGAAGATGATCCTCTCATCGAAAGCTATGGATATCCTCGAGGGGGTGAAGATCAAAGTGATTGCCAAAATCATCAAGGAAACTTCTGTTGCCATTTGCATGACCCTTAGCCATGTTGAGAATCTCATCACTGGTGTCACCAAGGGCTATCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCGATCAATGCTAGCATAACCAACGACAACAAGTCCATGGAGATCTGTAACTTTCTTGGTGAGAAAAAGAAATGCCATTTCAAGAACAAAGATATCTGGAAGTTCCTTGATGGTATTTATGTTAACGCAAAGGGAAATGTTCTCGAAGAAGAGTGA MKMILSSKAMDILEGVKIKVIAKIIKETSVAICMTLSHVENLITGVTKGYRYKMRFVYAHFPINASITNDNKSMEICNFLGEKKKCHFKNKDIWKFLDGIYVNAKGNVLEEE Homology
BLAST of Lag0042186.1 vs. NCBI nr
Match: KAG5255351.1 (60S ribosomal protein [Salix suchowensis]) HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30 Identity = 85/154 (55.19%), Postives = 96/154 (62.34%), Query Frame = 0
BLAST of Lag0042186.1 vs. NCBI nr
Match: XP_022973063.1 (60S ribosomal protein L9-like [Cucurbita maxima]) HSP 1 Score: 137.1 bits (344), Expect = 9.2e-29 Identity = 92/194 (47.42%), Postives = 98/194 (50.52%), Query Frame = 0
BLAST of Lag0042186.1 vs. NCBI nr
Match: XP_023551562.1 (60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137.1 bits (344), Expect = 9.2e-29 Identity = 92/194 (47.42%), Postives = 98/194 (50.52%), Query Frame = 0
BLAST of Lag0042186.1 vs. NCBI nr
Match: XP_015878732.1 (60S ribosomal protein L9 isoform X1 [Ziziphus jujuba] >XP_015878733.1 60S ribosomal protein L9 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28 Identity = 91/194 (46.91%), Postives = 98/194 (50.52%), Query Frame = 0
BLAST of Lag0042186.1 vs. NCBI nr
Match: XP_022159699.1 (60S ribosomal protein L9-like [Momordica charantia]) HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28 Identity = 92/194 (47.42%), Postives = 98/194 (50.52%), Query Frame = 0
BLAST of Lag0042186.1 vs. ExPASy Swiss-Prot
Match: P30707 (60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.4e-27 Identity = 85/193 (44.04%), Postives = 95/193 (49.22%), Query Frame = 0
BLAST of Lag0042186.1 vs. ExPASy Swiss-Prot
Match: P49210 (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3) HSP 1 Score: 119.8 bits (299), Expect = 2.0e-26 Identity = 77/189 (40.74%), Postives = 92/189 (48.68%), Query Frame = 0
BLAST of Lag0042186.1 vs. ExPASy Swiss-Prot
Match: P49209 (60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3) HSP 1 Score: 114.8 bits (286), Expect = 6.4e-25 Identity = 78/194 (40.21%), Postives = 92/194 (47.42%), Query Frame = 0
BLAST of Lag0042186.1 vs. ExPASy Swiss-Prot
Match: Q9SZX9 (60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.2e-24 Identity = 77/194 (39.69%), Postives = 91/194 (46.91%), Query Frame = 0
BLAST of Lag0042186.1 vs. ExPASy Swiss-Prot
Match: P51401 (60S ribosomal protein L9-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL9B PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.5e-15 Identity = 48/118 (40.68%), Postives = 62/118 (52.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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