Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGAAGAATGAAAGGATGAAGAGGAAGAAGATGGAGAAGAAGAAGGGAA GTAAAGAAATGGAGAAAAAATAAAATAATTAAAAAAATAATAATATTTTAATATTTTTTATTTTTTTATTTTAAAAAATTTTAAAAATAATTTTCTTTATTAAAATAATAGTGCCACGTCAGCAACTGTTAAAATTTAACAGAAAAGTTGACGGCAGGGACCAAAATGCTCTTTATCTCAAAACTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAACTGTCACTTAACCCAAACCTCAGGGACTAAAAGTGTATTTTTCCCTAAAATTTATCTAGATCTTATTTTCAGTTATTTGAATTCGGTTTAATTTGAATTAATAAAGATTTTCCATAATTTATTCGGCTTCTCTTGAGAATAAAAGATTAAATTTGATTTGATCGGATAAATTTAAATTTGAAAGATTTGATTTTCTTATTTTGAAATTCAAATACCGTATCCAAGATTCTTCAGGTTGTTGCAGCAAGATTATGGTTGGAGCAAAATAATCCGAATTAAAAGGGTTTCCGTTGGAAATTTATTATTTTTACCGTTGGATTTTGGCTTTGAATTTTCGCAGGTAAATTTGCATGCATCATCTGATGAAGCCACGTGTCGTAGAGCAATCAACCGAAGGCTTCAATGATGGACAGCACATCAATTTTTACCATGGGCGTTTTGGAATCCACGATTTTACCGTTGCTAGATTCAATTTTTCAAGTTACATTAAACGGTAATATAATTAATGTGCCAAATCTTTTCAGTTAGGATTTGAATTTGCTGGAGCCTTATTTATTCATAGACTCTGGTACGTTTCTTCTTACTTCATCTCTTTGTTTCAATCTTGCCATCTGCAATTTTCTTTCTTTCTCCCTTTCATTCTCTGCAAAACCATTTGAGTTATCTATGGCCAAAACAAGAGCTAGAAAGAGAGGGAGAGTGAAGAGGAGGAGGTATCGGTCACGCCGGAAGTGCAAAAAGGGAAAACCAAGAAGAAAAGAACGCCGGAGGAAAATGAAGCAAAGAAAAGGAGAAGGCAGCAAAGGGCTGCAGAACATGAGGAAGTTCAGGAGGTGGCAGAAGTTGTTGCCACTACTGCGGAGGAAGGAAGTACTCAAGAACCTGAAGTGCAAAACCCAGATACGGTTCAAGAAAAGATTGCTGAGAAAAATCAAGAAACAGAGGTTGAGGAGCAGGCCGCAGGTATGCTTGAAAAAGAGAAAACACCGGAGCTGGAGACTCATGTTGAAGTTGTAATGCCTGAACCACCTAAGCGCCGCCGCATCAAACGGAATGTGGGTCGCATGAGGGTGATTTGGAACACTCCATCGCCTCCGACGTCGGACTCTGAGGAAGAAAAGAGGGAGGCTGAAAATAAGGCAAAGGAAGAAGAGGCAAGGAAGGCAGAAGAAGAGCGTTTGCACGAACAAAGAGAAAACAAGGGCAAAGGAATTGTCAAAGCATCGGGTGAGATTGAGGAGCCGAGGGTACCGTTCATTCGCTTCGTCAACGAACTCGCTAGAGCAAAAAATCAAGAGGTATTGAAGCGTGATTTCTTGTTTGAGCGGGGATTTGGCAGTGATTTGCCTAGGTTCTTGGAGTCTGGAATAGCGAACCTTGGGTGGAGGCAGTTTTGTGCGAAGCCTGATCCTGTCAATGCCAACATCGTGCGGGAATTCTACGCCAATCTTGACGTTAAGGATGATTTTGAAGTTATAGTGCGAGGAGTGCCTATACAATGGAGCCCAGAGGCCATTAATAATTTGTTTGATCTCCAGGACTTTCCACATGCAGTTTTTAATGAGATGATGGTTGCCCCATCGAGCGACCAATTAAGTGCGGCGGTCCGAGAGGTAGGTGTTGAGGGCACTACAACAAATTTGGCTTTTAATGTCGGGCAATGCCCGACATTAAAAGTCTTTAATGTCGGTCACTGA mRNA sequence
ATGAAGAAGAAGAATGAAAGGATGAAGAGGAAGAAGATGGAGAAGAAGAAGGGAAAGAGGGAGAGTGAAGAGGAGGAGGTATCGGTCACGCCGGAAGTGCAAAAAGGGAAAACCAAGAAGAAAAGAACGCCGGAGGAAAATGAAGCAAAGAAAAGGAGAAGGCAGCAAAGGGCTGCAGAACATGAGGAAGTTCAGGAGGTGGCAGAAGTTGTTGCCACTACTGCGGAGGAAGGAAGTACTCAAGAACCTGAAGTGCAAAACCCAGATACGGTTCAAGAAAAGATTGCTGAGAAAAATCAAGAAACAGAGGTTGAGGAGCAGGCCGCAGGTATGCTTGAAAAAGAGAAAACACCGGAGCTGGAGACTCATGTTGAAGTTGTAATGCCTGAACCACCTAAGCGCCGCCGCATCAAACGGAATGTGGGTCGCATGAGGGTGATTTGGAACACTCCATCGCCTCCGACGTCGGACTCTGAGGAAGAAAAGAGGGAGGCTGAAAATAAGGCAAAGGAAGAAGAGGCAAGGAAGGCAGAAGAAGAGCGTTTGCACGAACAAAGAGAAAACAAGGGCAAAGGAATTGTCAAAGCATCGGGTGAGATTGAGGAGCCGAGGGTACCGTTCATTCGCTTCGTCAACGAACTCGCTAGAGCAAAAAATCAAGAGGTATTGAAGCGTGATTTCTTGTTTGAGCGGGGATTTGGCAGTGATTTGCCTAGGTTCTTGGAGTCTGGAATAGCGAACCTTGGGTGGAGGCAGTTTTGTGCGAAGCCTGATCCTGTCAATGCCAACATCGTGCGGGAATTCTACGCCAATCTTGACGTTAAGGATGATTTTGAAGTTATAGTGCGAGGAGTGCCTATACAATGGAGCCCAGAGGCCATTAATAATTTGTTTGATCTCCAGGACTTTCCACATGCAGTTTTTAATGAGATGATGGTTGCCCCATCGAGCGACCAATTAAGTGCGGCGGTCCGAGAGGTAGGTGTTGAGGGCACTACAACAAATTTGGCTTTTAATGTCGGGCAATGCCCGACATTAAAAGTCTTTAATGTCGGTCACTGA Coding sequence (CDS)
ATGAAGAAGAAGAATGAAAGGATGAAGAGGAAGAAGATGGAGAAGAAGAAGGGAAAGAGGGAGAGTGAAGAGGAGGAGGTATCGGTCACGCCGGAAGTGCAAAAAGGGAAAACCAAGAAGAAAAGAACGCCGGAGGAAAATGAAGCAAAGAAAAGGAGAAGGCAGCAAAGGGCTGCAGAACATGAGGAAGTTCAGGAGGTGGCAGAAGTTGTTGCCACTACTGCGGAGGAAGGAAGTACTCAAGAACCTGAAGTGCAAAACCCAGATACGGTTCAAGAAAAGATTGCTGAGAAAAATCAAGAAACAGAGGTTGAGGAGCAGGCCGCAGGTATGCTTGAAAAAGAGAAAACACCGGAGCTGGAGACTCATGTTGAAGTTGTAATGCCTGAACCACCTAAGCGCCGCCGCATCAAACGGAATGTGGGTCGCATGAGGGTGATTTGGAACACTCCATCGCCTCCGACGTCGGACTCTGAGGAAGAAAAGAGGGAGGCTGAAAATAAGGCAAAGGAAGAAGAGGCAAGGAAGGCAGAAGAAGAGCGTTTGCACGAACAAAGAGAAAACAAGGGCAAAGGAATTGTCAAAGCATCGGGTGAGATTGAGGAGCCGAGGGTACCGTTCATTCGCTTCGTCAACGAACTCGCTAGAGCAAAAAATCAAGAGGTATTGAAGCGTGATTTCTTGTTTGAGCGGGGATTTGGCAGTGATTTGCCTAGGTTCTTGGAGTCTGGAATAGCGAACCTTGGGTGGAGGCAGTTTTGTGCGAAGCCTGATCCTGTCAATGCCAACATCGTGCGGGAATTCTACGCCAATCTTGACGTTAAGGATGATTTTGAAGTTATAGTGCGAGGAGTGCCTATACAATGGAGCCCAGAGGCCATTAATAATTTGTTTGATCTCCAGGACTTTCCACATGCAGTTTTTAATGAGATGATGGTTGCCCCATCGAGCGACCAATTAAGTGCGGCGGTCCGAGAGGTAGGTGTTGAGGGCACTACAACAAATTTGGCTTTTAATGTCGGGCAATGCCCGACATTAAAAGTCTTTAATGTCGGTCACTGA Protein sequence
MKKKNERMKRKKMEKKKGKRESEEEEVSVTPEVQKGKTKKKRTPEENEAKKRRRQQRAAEHEEVQEVAEVVATTAEEGSTQEPEVQNPDTVQEKIAEKNQETEVEEQAAGMLEKEKTPELETHVEVVMPEPPKRRRIKRNVGRMRVIWNTPSPPTSDSEEEKREAENKAKEEEARKAEEERLHEQRENKGKGIVKASGEIEEPRVPFIRFVNELARAKNQEVLKRDFLFERGFGSDLPRFLESGIANLGWRQFCAKPDPVNANIVREFYANLDVKDDFEVIVRGVPIQWSPEAINNLFDLQDFPHAVFNEMMVAPSSDQLSAAVREVGVEGTTTNLAFNVGQCPTLKVFNVGH
Homology
BLAST of Lag0041720 vs. NCBI nr
Match:
PON42276.1 (hypothetical protein PanWU01x14_283280 [Parasponia andersonii])
HSP 1 Score: 75.9 bits (185), Expect = 7.9e-10
Identity = 45/131 (34.35%), Postives = 68/131 (51.91%), Query Frame = 0
Query: 208 IRFVNELARAKNQE-VLKRDFLFERGFGSD------LPRFLESGIANLGWRQFCAKPDPV 267 ++ +E A + +E + R E+GF D P F+E I W+ FCA P+ + Sbjct: 14 VKLKSEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIEDVITQHNWQLFCAHPEDL 73 Query: 268 NANIVREFYANLDVKDDFEVIVRGVPIQWSPEAINNLFDLQDFPHAVFNEMMVAPSSDQL 327 A +VREFYAN+ DD V VRGV + S EAIN ++ L D P +E + A + +L Sbjct: 74 IAPLVREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYGLGD-PVDEHSEFVEAITEPEL 133 Query: 328 SAAVREVGVEG 332 + + V + G Sbjct: 134 ATVLETVAIAG 143
The following BLAST results are available for this feature:
Match Name E-value Identity Description
PON42276.1 7.9e-10 34.35 hypothetical protein PanWU01x14_283280 [Parasponia andersonii] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G A A G A A G A A G A A T G A A A G G A T G A A G A G G A A G A A G A T G G A G A A G A A G A A G G G A A A G A G G G A G A G T G A A G A G G A G G A G G T A T C G G T C A C G C C G G A A G T G C A A A A A G G G A A A A C C A A G A A G A A A A G A A C G C C G G A G G A A A A T G A A G C A A A G A A A A G G A G A A G G C A G C A A A G G G C T G C A G A A C A T G A G G A A G T T C A G G A G G T G G C A G A A G T T G T T G C C A C T A C T G C G G A G G A A G G A A G T A C T C A A G A A C C T G A A G T G C A A A A C C C A G A T A C G G T T C A A G A A A A G A T T G C T G A G A A A A A T C A A G A A A C A G A G G T T G A G G A G C A G G C C G C A G G T A T G C T T G A A A A A G A G A A A A C A C C G G A G C T G G A G A C T C A T G T T G A A G T T G T A A T G C C T G A A C C A C C T A A G C G C C G C C G C A T C A A A C G G A A T G T G G G T C G C A T G A G G G T G A T T T G G A A C A C T C C A T C G C C T C C G A C G T C G G A C T C T G A G G A A G A A A A G A G G G A G G C T G A A A A T A A G G C A A A G G A A G A A G A G G C A A G G A A G G C A G A A G A A G A G C G T T T G C A C G A A C A A A G A G A A A A C A A G G G C A A A G G A A T T G T C A A A G C A T C G G G T G A G A T T G A G G A G C C G A G G G T A C C G T T C A T T C G C T T C G T C A A C G A A C T C G C T A G A G C A A A A A A T C A A G A G G T A T T G A A G C G T G A T T T C T T G T T T G A G C G G G G A T T T G G C A G T G A T T T G C C T A G G T T C T T G G A G T C T G G A A T A G C G A A C C T T G G G T G G A G G C A G T T T T G T G C G A A G C C T G A T C C T G T C A A T G C C A A C A T C G T G C G G G A A T T C T A C G C C A A T C T T G A C G T T A A G G A T G A T T T T G A A G T T A T A G T G C G A G G A G T G C C T A T A C A A T G G A G C C C A G A G G C C A T T A A T A A T T T G T T T G A T C T C C A G G A C T T T C C A C A T G C A G T T T T T A A T G A G A T G A T G G T T G C C C C A T C G A G C G A C C A A T T A A G T G C G G C G G T C C G A G A G G T A G G T G T T G A G G G C A C T A C A A C A A A T T T G G C T T T T A A T G T C G G G C A A T G C C C G A C A T T A A A A G T C T T T A A T G T C G G T C A C T G A 100 200 300 400 500 600 700 800 900 1000 Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence Coil Coil mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 155..189
None No IPR available COILS Coil Coil coord: 1..25
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 17..67
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..130
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 74..88
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..16
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 147..191
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 94..130
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 156..191
Relationships
The following mRNA feature(s) are a part of this gene: