Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTTTTGGATGTTTCGCCTTCTTCATCATCCTCTTATTTTTGGAAGGGCTTTATCTGGGGGATGGACCTTTTGAAAAGAGGTATCAGAAGAAATCTAGGTAACGACATCTCAATAAAAATGTTTAGTGATCCTTGGATTCCTCGTCCATCAACCTTTAAGATTCTCTCACATCCTAGATCAGAGAATGCAGATATGGTGGTGGCAGACTTTATTACAGAGACAAACCAGTGGGACATTGCCAAATTACATCAAGTTTTGGGAAAAGAAGATGTGGATGAGATTGTCCGACTTCCCATCAGCACATCCGCGTCGGACAAATGGGTGTGGCATTATGATAAAATGGGGAAGTATACTGTCAAAAGTGGTTATAAACTATGTATTAAGCATAGTCAAGAGGCCTCTGCCTCTTCAGCAGAGGTAGAATCGAGATGGTGAGCGAATGTTTGGAAACTTAAAGTTCCAAATAAGGTGAAACACTTTGTTTGGAAATCTTTTCATGAAGTCATTCCCACTATAGCTAACCTTAAGAGGCATCATGTTCCTGTTAGTGGAAGTTGCCCAGTGTGTAGGGAGGCGATGGAGACTACTGATCCTGCTCTGTTCTTATGTTCTCGTGCTCGTGAGGTGTGGGAAGGTATTCTCCCATGGATGAATGAGGAGTTTTGGATACCCATGGATATCCAAGACAGATGGTTGAGCCTTGGTGACTGTCAAAGCCAACGGTTAGATCTTATCAGTATTGGGGCTTGGGCAATTTGGAATGATAGGAACAATATTCATCACCAAAGGTTAGTTCCTAATGTCCAAACTCGAAGTGAATGGATTCTTGAGTATTTGGAGGAATTCCAAAATGCAAATCCAGTTCGTGGAATTGTTAATCAAGGAGTGGATGATGTTAGAAGAATACTACAAGGCGTTGAAGAGATAATCATGCATTGTGATGCGGCTTACGATGAGATTAATGGTAGTGTGGGTATTGGACTGGTGTTTCAGGACAAACAAGGGAATCTTAAGGTCGTGAAGGCTTTGTCTACAATTAGTGGTATATCACCGTTGGGAGCGGAAGCGGAAGTAGTCTTACAAGGGCTTTGTTTCGCTCGATCTTTAAAAATGCAGTGTTTGTCAGTTCTGTCTGATTCTTTAACATTCATAAAGACAGTCAGGAAAAAAGTGCAATGTGAAACTTGTTTGGCCACTACGATATGGGATATTAAGGAGATTCATCAGTCTTTCAGGACCATCAGATTCGAACATGCTCTTCGCCATTATAATCGATTTGCTCATAAGTTAGCCCATGTGGGCCTTCATTATCAATCACAGTCGTGGTTAGGAAACTATCCTAATTGGATACATAGTATGTCGAAAGAGCGATACATGTTTGTACCCCTAGGGGAATTTTGA
mRNA sequence
ATGTCTGTTTTGGATGTTTCGCCTTCTTCATCATCCTCTTATTTTTGGAAGGGCTTTATCTGGGGGATGGACCTTTTGAAAAGAGGTATCAGAAGAAATCTAGGTAACGACATCTCAATAAAAATGTTTAGTGATCCTTGGATTCCTCGTCCATCAACCTTTAAGATTCTCTCACATCCTAGATCAGAGAATGCAGATATGGTGGTGGCAGACTTTATTACAGAGACAAACCAGTGGGACATTGCCAAATTACATCAAGTTTTGGGAAAAGAAGATGTGGATGAGATTGTCCGACTTCCCATCAGCACATCCGCGTCGGACAAATGGGTGTGGCATTATGATAAAATGGGGAAGTATACTGTCAAAAGTGGTTATAAACTATGTATTAAGCATAGTCAAGAGGCCTCTGCCTCTTCAGCAGAGGTAGAATCGAGATGTGGAAGTTGCCCAGTGTGTAGGGAGGCGATGGAGACTACTGATCCTGCTCTGTTCTTATGTTCTCGTGCTCGTGAGGTGTGGGAAGGTATTCTCCCATGGATGAATGAGGAGTTTTGGATACCCATGGATATCCAAGACAGATGGTTGAGCCTTGGTGACTGTCAAAGCCAACGGTTAGATCTTATCAGTATTGGGGCTTGGGCAATTTGGAATGATAGGAACAATATTCATCACCAAAGGTTAGTTCCTAATGTCCAAACTCGAAGTGAATGGATTCTTGAGTATTTGGAGGAATTCCAAAATGCAAATCCAGTTCGTGGAATTGTTAATCAAGGAGTGGATGATGTTAGAAGAATACTACAAGGCGTTGAAGAGATAATCATGCATTGTGATGCGGCTTACGATGAGATTAATGGTAGTGTGGGTATTGGACTGGTGTTTCAGGACAAACAAGGGAATCTTAAGGTCGTGAAGGCTTTGTCTACAATTAGTGGTATATCACCGTTGGGAGCGGAAGCGGAAGTAGTCTTACAAGGGCTTTGTTTCGCTCGATCTTTAAAAATGCAGTGTTTGTCAGTTCTGTCTGATTCTTTAACATTCATAAAGACAGTCAGGAAAAAAGTGCAATGTGAAACTTGTTTGGCCACTACGATATGGGATATTAAGGAGATTCATCAGTCTTTCAGGACCATCAGATTCGAACATGCTCTTCGCCATTATAATCGATTTGCTCATAAGTTAGCCCATGTGGGCCTTCATTATCAATCACAGTCGTGGTTAGGAAACTATCCTAATTGGATACATAGTATGTCGAAAGAGCGATACATGTTTGTACCCCTAGGGGAATTTTGA
Coding sequence (CDS)
ATGTCTGTTTTGGATGTTTCGCCTTCTTCATCATCCTCTTATTTTTGGAAGGGCTTTATCTGGGGGATGGACCTTTTGAAAAGAGGTATCAGAAGAAATCTAGGTAACGACATCTCAATAAAAATGTTTAGTGATCCTTGGATTCCTCGTCCATCAACCTTTAAGATTCTCTCACATCCTAGATCAGAGAATGCAGATATGGTGGTGGCAGACTTTATTACAGAGACAAACCAGTGGGACATTGCCAAATTACATCAAGTTTTGGGAAAAGAAGATGTGGATGAGATTGTCCGACTTCCCATCAGCACATCCGCGTCGGACAAATGGGTGTGGCATTATGATAAAATGGGGAAGTATACTGTCAAAAGTGGTTATAAACTATGTATTAAGCATAGTCAAGAGGCCTCTGCCTCTTCAGCAGAGGTAGAATCGAGATGTGGAAGTTGCCCAGTGTGTAGGGAGGCGATGGAGACTACTGATCCTGCTCTGTTCTTATGTTCTCGTGCTCGTGAGGTGTGGGAAGGTATTCTCCCATGGATGAATGAGGAGTTTTGGATACCCATGGATATCCAAGACAGATGGTTGAGCCTTGGTGACTGTCAAAGCCAACGGTTAGATCTTATCAGTATTGGGGCTTGGGCAATTTGGAATGATAGGAACAATATTCATCACCAAAGGTTAGTTCCTAATGTCCAAACTCGAAGTGAATGGATTCTTGAGTATTTGGAGGAATTCCAAAATGCAAATCCAGTTCGTGGAATTGTTAATCAAGGAGTGGATGATGTTAGAAGAATACTACAAGGCGTTGAAGAGATAATCATGCATTGTGATGCGGCTTACGATGAGATTAATGGTAGTGTGGGTATTGGACTGGTGTTTCAGGACAAACAAGGGAATCTTAAGGTCGTGAAGGCTTTGTCTACAATTAGTGGTATATCACCGTTGGGAGCGGAAGCGGAAGTAGTCTTACAAGGGCTTTGTTTCGCTCGATCTTTAAAAATGCAGTGTTTGTCAGTTCTGTCTGATTCTTTAACATTCATAAAGACAGTCAGGAAAAAAGTGCAATGTGAAACTTGTTTGGCCACTACGATATGGGATATTAAGGAGATTCATCAGTCTTTCAGGACCATCAGATTCGAACATGCTCTTCGCCATTATAATCGATTTGCTCATAAGTTAGCCCATGTGGGCCTTCATTATCAATCACAGTCGTGGTTAGGAAACTATCCTAATTGGATACATAGTATGTCGAAAGAGCGATACATGTTTGTACCCCTAGGGGAATTTTGA
Protein sequence
MSVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPISTSASDKWVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVESRCGSCPVCREAMETTDPALFLCSRAREVWEGILPWMNEEFWIPMDIQDRWLSLGDCQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPVRGIVNQGVDDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQSWLGNYPNWIHSMSKERYMFVPLGEF
Homology
BLAST of Lag0006229 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 228.8 bits (582), Expect = 8.9e-56
Identity = 147/464 (31.68%), Postives = 224/464 (48.28%), Query Frame = 0
Query: 2 SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPR 61
S+L S +S SSYFWKGF+WG DLL +G+R +GN +IK FSDPW+PRP+TFK L
Sbjct: 987 SLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRF-N 1046
Query: 62 SENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIST-SASDKWVWHYDKMGKYT 121
+ D VA FIT WD+ + ED D I+ +PIS+ + D W+WHYDK G Y+
Sbjct: 1047 NGALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYS 1106
Query: 122 VKSGYKLCIKHSQEASASSAEVE------------------------------------- 181
V+SGYKL + A+++S
Sbjct: 1107 VRSGYKLYMHLKCNATSASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLR 1166
Query: 182 --SRCGSCPVCREAMETTDPALFLCSRAREVWEGILPWMN----EEFWIPMDIQDRWLSL 241
+C +C + E+ A F C RAR++W + P++ E+ + + W SL
Sbjct: 1167 GIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAED---NISFLELWSSL 1226
Query: 242 GD-CQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLE-----EFQNANPV 301
+ + + L+L +I W IWNDRN++ H + V V+ + EW+ +L+ + N +P
Sbjct: 1227 TEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPR 1286
Query: 302 RGIVNQGVDDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISG 361
++ V R V + ++ DAA S G + +D +L ++
Sbjct: 1287 TQSNHRPVVQYWRPSSSV-SLKLNTDAACR--GASTSFGCIIRDSSCSLVAATSIRVPFP 1346
Query: 362 ISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIH 414
+SPL AE +L+GL FA + L V SDSL I+ +R ++ + +I+ +
Sbjct: 1347 LSPLLAEIRCILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALT 1406
BLAST of Lag0006229 vs. NCBI nr
Match:
XP_030497600.1 (uncharacterized protein LOC115713257 [Cannabis sativa])
HSP 1 Score: 169.9 bits (429), Expect = 4.9e-38
Identity = 125/457 (27.35%), Postives = 191/457 (41.79%), Query Frame = 0
Query: 9 SSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMV 68
S SS W+G +WG +LL +G+ +G+ + D WIP FK L S +
Sbjct: 915 SGLSSLTWQGIVWGRELLSKGLIIKIGDGTGVNCAHDSWIPGNEYFKPLRFTGS--CSNL 974
Query: 69 VADFITETNQWDIAKLHQVLGKEDVDEIVRLPIS-TSASDKWVWHYDKMGKYTVKSGYKL 128
VAD+IT+T +WD+ LH D+D I+ +P+S S D+W WHYD G YTVKSGY L
Sbjct: 975 VADYITDTREWDLELLHNDFSPADIDRILTIPLSYNSTRDRWRWHYDSSGDYTVKSGYNL 1034
Query: 129 -CIKHSQEASASSAEVES--------------------------------------RCGS 188
C +++ S+SS E+ +
Sbjct: 1035 ACSLENKDHSSSSTSQEAWWQLFWGLNLPSKVRIFGWRVINSALPVAQNLFHRKVITSAT 1094
Query: 189 CPVCREAMETTDPALFLCSRAREVWEGI---LPWMNEEFWIPMDIQDRWLSLGDCQSQ-R 248
C +C A E+ ALF C A+ VW+ L + F M D L L ++
Sbjct: 1095 CSLCSRAWESIGHALFSCCHAKSVWQHTSFQLDFTKASF---MKDGDYLLFLSTILTKSE 1154
Query: 249 LDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNAN----PVRGIVNQGVD 308
L+ + W IW+DRNN H + + + S YL F + P V
Sbjct: 1155 LEKLFCTMWFIWSDRNNYIHCKQLKHPMAISSQAEAYLANFHSVKSATAPAVSCVAADAR 1214
Query: 309 DVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAE 368
V+ + + M+ DAA D +GIG++ +D G + + + EA+
Sbjct: 1215 TVKWVPPTESNLKMNVDAALDSSRNKIGIGVIIRDSTGRVIAAMSKPVVGNFKSQEMEAK 1274
Query: 369 VVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFE 417
+ GL +A+ L++Q V +D L + ++ K + + DI SF
Sbjct: 1275 AMFWGLQWAKQLQLQPHCVETDCLMLVHALQGKQSQLSSFHDLVEDISYHLSSFSNACIS 1334
BLAST of Lag0006229 vs. NCBI nr
Match:
XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])
HSP 1 Score: 168.3 bits (425), Expect = 1.4e-37
Identity = 132/470 (28.09%), Postives = 210/470 (44.68%), Query Frame = 0
Query: 2 SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPR 61
S L +++SY W+ +WG ++K+G+R +GN I +FSD W+PRP TF+ + P
Sbjct: 929 SFLCAKAGANASYIWRSIMWGRQVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPI-FPL 988
Query: 62 SENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI-STSASDKWVWHYDKMGKYT 121
S VVAD I NQWD KL Q D EI+++P+ + A D+ +WHYDK G Y+
Sbjct: 989 SLPVSSVVADLIKADNQWDEIKLRQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYS 1048
Query: 122 VKSGYKLCIKHSQEASASSAEVESRCGS-------------------------------- 181
VKSGY+L ++ S S E + S
Sbjct: 1049 VKSGYQLALRSKFPDSTSCTEASHKYWSALWTLELPEKLKIFMWRASNNLLPSAENLWKR 1108
Query: 182 -------CPVCREAMETTDPALFLCSRAREVWEGILPWMNEEFWIP---MDIQDRWLSL- 241
C C+ ++ET AL C AR++ W+ F P + QD + +L
Sbjct: 1109 KVVEEPTCKRCKLSVETISHALLECKAARKI------WLQSPFSAPRLEANSQDIFSTLQ 1168
Query: 242 ---GDCQSQRLDLISIGAWAIWNDRNN--IHHQRLVPNVQ-TRSEWILEYLEEFQNANPV 301
+ + L+L+ W+ W RN + L P + ++E +L + + P
Sbjct: 1169 NMAKELRKSDLELMVALCWSAWYARNKCIFDGRELNPIISAAKAESVLTAFQRVR--KPQ 1228
Query: 302 RGIVNQGVDDVRR-ILQGVEEII-MHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTI 361
+ ++ + + ++ L + + ++ DAA++ N S G+G V +D G + +
Sbjct: 1229 QSHISISIKEKQQEWLPPPQNVFKVNVDAAFNSKNLSAGVGAVIRDSNGKIVAAGVNQNL 1288
Query: 362 SGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKE 419
S AEAE VL GL AR+ + L + SD L ++ V + + TI I+
Sbjct: 1289 LKGSASLAEAEAVLWGLQLARNADVSSLIIESDCLEVVQLVNNTKGSRSEIFWTILAIQN 1348
BLAST of Lag0006229 vs. NCBI nr
Match:
XP_017250619.1 (PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus])
HSP 1 Score: 163.7 bits (413), Expect = 3.5e-36
Identity = 127/464 (27.37%), Postives = 203/464 (43.75%), Query Frame = 0
Query: 2 SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPR 61
S LD S W+ +WG LL G+RR +GN S + F DPW+ RP +F L R
Sbjct: 1109 SFLDSKEGRCPSLTWRSIVWGKTLLIEGLRRRIGNGQSTRAFKDPWLARPPSF--LPITR 1168
Query: 62 SENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIST-SASDKWVWHYDKMGKYT 121
++ V ++IT W+ + Q D+ I+ +P+S +D W WHY+ G YT
Sbjct: 1169 GSEEEVKVVEYIT-GGTWNRELIRQTFLSPDIQLILEIPLSRFDHADSWFWHYNSQGNYT 1228
Query: 122 VKSGYKLCIKHSQEASASSAEVESRC---------------------------------- 181
VKSGYKL +++ S+SS +V +
Sbjct: 1229 VKSGYKLVTNLNKDVSSSSEQVMGKWWKYFWANKIPRKILIFAWRGYHEILPTTKGLHIR 1288
Query: 182 -----GSCPVCREAMETTDPALFLCSRAREVWE----GILPWMNEEFWIPMDIQDRWLSL 241
+CP+C A ++ A+F C A+EVWE L EE + +D L +
Sbjct: 1289 KISLHSNCPLCGYADDSNAHAVFWCPFAQEVWELMTYPFLVGRKEE----ISFKDVLLYI 1348
Query: 242 GD-CQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPVRGIVN 301
+ + +D++ + W IW +RN + HQ+ W+ Y EE +NA
Sbjct: 1349 TELLEKDDVDMMLLTTWGIWTERNKLIHQQKRRTPSQIKVWLSAYYEEIKNAY------- 1408
Query: 302 QGVDDVRRILQG-------VEEI----IMHCDAAYDEINGSVGIG--LVFQDKQGNLKVV 361
V + R I +G VEE+ + DAA + +G+G ++ + + +
Sbjct: 1409 --VSENRAISRGDPINAHQVEEVSFGSTLFVDAALSKNTERIGLGAAIIASNNKTQATLS 1468
Query: 362 KALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATT 407
K L I +S L AEA ++ GL +A++ VL+DS + ++ + + + L
Sbjct: 1469 KPLEGI--LSVLHAEALALVVGLQWAQTTGYTLKKVLTDSQSLVQALNSEAEYHNELGLL 1528
BLAST of Lag0006229 vs. NCBI nr
Match:
XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])
HSP 1 Score: 161.0 bits (406), Expect = 2.3e-35
Identity = 110/452 (24.34%), Postives = 202/452 (44.69%), Query Frame = 0
Query: 10 SSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVV 69
S+ S+ W+ +WG ++K+G+R +G+ + ++ D WIPRP+TF+ +S P++ + VV
Sbjct: 996 SNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPIS-PKTLPHETVV 1055
Query: 70 ADFITETNQWDIAKLHQVLGKEDVDEIVRLPI-STSASDKWVWHYDKMGKYTVKSGYKLC 129
AD I N+W + +L Q KED++ I+++ + S D+ +WH+DK G+Y+VKSGY+L
Sbjct: 1056 ADLIDSENKWRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLA 1115
Query: 130 IKHSQEASASSAEVESRCGS---------------------------------------C 189
+ + S+ SR C
Sbjct: 1116 LNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPIC 1175
Query: 190 PVCREAMETTDPALFLCSRAREVWEGILPWM-------NEEFWIPMDIQDRWLSLGDCQS 249
C+ +ET L C AR++W+ + P + N++F+ IQ+ W ++
Sbjct: 1176 QRCKLQVETVSHVLIECKAARKIWD-LAPLIVQPSKDHNQDFF--SAIQEMWSRSSTAEA 1235
Query: 250 QRLDLISIGAWAIWNDRNNIHHQRLVPN---VQTRSEWILEYLEEFQNANPVRGIVNQGV 309
+L+ + W IW+ RN + + + +++ +L+ + V G ++G+
Sbjct: 1236 ---ELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGI 1295
Query: 310 DDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEA 369
D + + ++ DAA + VG+G + +D +G + V AEA
Sbjct: 1296 DQQKWKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEA 1355
Query: 370 EVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRF 411
E + GL A + L V SD ++ + T + + D++ + F+ ++F
Sbjct: 1356 EAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKEFKQVQF 1415
BLAST of Lag0006229 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 4.3e-56
Identity = 147/464 (31.68%), Postives = 224/464 (48.28%), Query Frame = 0
Query: 2 SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPR 61
S+L S +S SSYFWKGF+WG DLL +G+R +GN +IK FSDPW+PRP+TFK L
Sbjct: 987 SLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRF-N 1046
Query: 62 SENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIST-SASDKWVWHYDKMGKYT 121
+ D VA FIT WD+ + ED D I+ +PIS+ + D W+WHYDK G Y+
Sbjct: 1047 NGALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYS 1106
Query: 122 VKSGYKLCIKHSQEASASSAEVE------------------------------------- 181
V+SGYKL + A+++S
Sbjct: 1107 VRSGYKLYMHLKCNATSASTNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLR 1166
Query: 182 --SRCGSCPVCREAMETTDPALFLCSRAREVWEGILPWMN----EEFWIPMDIQDRWLSL 241
+C +C + E+ A F C RAR++W + P++ E+ + + W SL
Sbjct: 1167 GIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAED---NISFLELWSSL 1226
Query: 242 GD-CQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLE-----EFQNANPV 301
+ + + L+L +I W IWNDRN++ H + V V+ + EW+ +L+ + N +P
Sbjct: 1227 TEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPR 1286
Query: 302 RGIVNQGVDDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISG 361
++ V R V + ++ DAA S G + +D +L ++
Sbjct: 1287 TQSNHRPVVQYWRPSSSV-SLKLNTDAACR--GASTSFGCIIRDSSCSLVAATSIRVPFP 1346
Query: 362 ISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIH 414
+SPL AE +L+GL FA + L V SDSL I+ +R ++ + +I+ +
Sbjct: 1347 LSPLLAEIRCILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALT 1406
BLAST of Lag0006229 vs. ExPASy TrEMBL
Match:
A0A803NM27 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 5.1e-41
Identity = 130/467 (27.84%), Postives = 204/467 (43.68%), Query Frame = 0
Query: 4 LDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSE 63
L + SS W+GF WG +LLK+G+R +GN I +DPWIP S F + +
Sbjct: 1318 LSAATCGVSSLTWQGFCWGRELLKKGLRLQVGNGFDIACATDPWIPGNSIFTPIYFTGAP 1377
Query: 64 NADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPISTSA-SDKWVWHYDKMGKYTVK 123
VAD+IT +W+++KL+ DV+ I+ LP+S A SD WVWH G+Y VK
Sbjct: 1378 T--NTVADYITPEKEWNVSKLNADFSSADVERILSLPLSHHAHSDYWVWHATG-GQYEVK 1437
Query: 124 SGYKLCIKHSQE--ASASSAEV-------------------------------------E 183
SGY + + E S SS V
Sbjct: 1438 SGYHVACLLADENPVSVSSPNVSWWKSFWQLKLPPKVKLFAWKAIHNALPVASELYKRKS 1497
Query: 184 SRCGSCPVCREAMETTDPALFLCSRAREVWEGILPWMNEEFWIPMDIQDRWLSLGDCQSQ 243
SC +C A E+ A+F C AR VW+ N + + M I+D + +C ++
Sbjct: 1498 LTSASCSLCLNAWESVGHAMFACKHARHVWKIAGFSFNNKAAVSMKIEDFLFQISECYTK 1557
Query: 244 -RLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPV---RGIVNQGV 303
L++I W+IW+DRNN+ H ++ S +L FQ+A + G+
Sbjct: 1558 SELEMIFCTMWSIWSDRNNVLHGKIPQQPSVISAKAASFLSSFQSAQQLSLHAGLAPADT 1617
Query: 304 DDVRRILQGVEE--IIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGA 363
R + ++ DAA+D+ +G G + +D GN+K + P
Sbjct: 1618 PTAHRAWTPPPPNLLKLNVDAAFDDTRKRIGFGAIIRDSTGNVKAAMSHPIDGCCRPQDM 1677
Query: 364 EAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTI 423
EA+ + L +AR L + V +DSL + +RK + I+D++ T+
Sbjct: 1678 EAKGLFYSLKWARQLNFKVDLVETDSLILVNALRKSTSKSSSFQDLIFDVQTQLSYLPTV 1737
BLAST of Lag0006229 vs. ExPASy TrEMBL
Match:
A0A803NGI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 2.8e-39
Identity = 117/432 (27.08%), Postives = 202/432 (46.76%), Query Frame = 0
Query: 4 LDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSE 63
L S + SS W+G WG DLL +G+R +G+ S++ SDPWIPR S F +
Sbjct: 692 LQASKTGCSSLTWQGICWGRDLLVKGLRLKIGDGSSVQCSSDPWIPRHSEFTPICF--LG 751
Query: 64 NADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPISTSA-SDKWVWHYDKMGKYTVK 123
+ +V+ +IT+ N+W++ L + DVD I+ +P+S+S+ SD+W+WH+ +YTV+
Sbjct: 752 DTQNLVSYYITDDNEWNLPLLARDFSAVDVDYILSIPLSSSSVSDQWIWHFTNSNEYTVQ 811
Query: 124 SGYKLC--IKHSQEASASSAE---VE------SRCGSCPVCREAMETTDPALFLCSRARE 183
SGY L ++ S +++S+ + VE + +C +C A E+ + ALFLC A++
Sbjct: 812 SGYHLANDLEDSDLSNSSNNQRYLVEILWNPATPIQACSLCSNAWESVEHALFLCKHAKK 871
Query: 184 VWEGILPWMNEEFWIPMDIQDRWLSLGDCQS-QRLDLISIGAWAIWNDRNNIHHQRLVPN 243
VW +N + M D + L +S ++ + W +WNDRNN H + P
Sbjct: 872 VWRVAGISLNFDLVSRMSFADFLMLLSTLKSTSEMEQLLCTLWFLWNDRNNFIHGK--PG 931
Query: 244 VQTRSEWI--LEYLEEFQNANPVRGIVNQGVDDVRR---ILQGVEEIIMHCDAAYDEING 303
+ W + Y FQ + + + I ++++ M+ DAA D
Sbjct: 932 LSPTQLWAKSVAYFCNFQQQSTSSKSIRDSTGAAAQPHWISPPLDKLKMNVDAACDISRN 991
Query: 304 SVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLT 363
+G+G++ ++ G + + + P EA+ +L G+ +A + SDSL
Sbjct: 992 KIGVGIIIRNSSGQVVAAYSKPLTGRLKPQEMEAKALLIGINWAARCNLSINLFESDSLI 1051
Query: 364 FIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQ-S 417
+ ++ + + DIK ++ H R N+ AH LA L
Sbjct: 1052 LVNSINSISNAISSFGDLVLDIKNRLSYLSSVCVSHVKRDANQAAHGLAKHALELDDDCM 1111
BLAST of Lag0006229 vs. ExPASy TrEMBL
Match:
A0A803PIB6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 169.9 bits (429), Expect = 2.4e-38
Identity = 125/457 (27.35%), Postives = 191/457 (41.79%), Query Frame = 0
Query: 9 SSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMV 68
S SS W+G +WG +LL +G+ +G+ + D WIP FK L S +
Sbjct: 1375 SGLSSLTWQGIVWGRELLSKGLIIKIGDGTGVNCAHDSWIPGNEYFKPLRFTGS--CSNL 1434
Query: 69 VADFITETNQWDIAKLHQVLGKEDVDEIVRLPIS-TSASDKWVWHYDKMGKYTVKSGYKL 128
VAD+IT+T +WD+ LH D+D I+ +P+S S D+W WHYD G YTVKSGY L
Sbjct: 1435 VADYITDTREWDLELLHNDFSPADIDRILTIPLSYNSTRDRWRWHYDSSGDYTVKSGYNL 1494
Query: 129 -CIKHSQEASASSAEVES--------------------------------------RCGS 188
C +++ S+SS E+ +
Sbjct: 1495 ACSLENKDHSSSSTSQEAWWQLFWGLNLPSKVRIFGWRVINSALPVAQNLFHRKVITSAT 1554
Query: 189 CPVCREAMETTDPALFLCSRAREVWEGI---LPWMNEEFWIPMDIQDRWLSLGDCQSQ-R 248
C +C A E+ ALF C A+ VW+ L + F M D L L ++
Sbjct: 1555 CSLCSRAWESIGHALFSCCHAKSVWQHTSFQLDFTKASF---MKDGDYLLFLSTILTKSE 1614
Query: 249 LDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNAN----PVRGIVNQGVD 308
L+ + W IW+DRNN H + + + S YL F + P V
Sbjct: 1615 LEKLFCTMWFIWSDRNNYIHCKQLKHPMAISSQAEAYLANFHSVKSATAPAVSCVAADAR 1674
Query: 309 DVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAE 368
V+ + + M+ DAA D +GIG++ +D G + + + EA+
Sbjct: 1675 TVKWVPPTESNLKMNVDAALDSSRNKIGIGVIIRDSTGRVIAAMSKPVVGNFKSQEMEAK 1734
Query: 369 VVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFE 417
+ GL +A+ L++Q V +D L + ++ K + + DI SF
Sbjct: 1735 AMFWGLQWAKQLQLQPHCVETDCLMLVHALQGKQSQLSSFHDLVEDISYHLSSFSNACIS 1794
BLAST of Lag0006229 vs. ExPASy TrEMBL
Match:
A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 2.3e-33
Identity = 107/461 (23.21%), Postives = 193/461 (41.87%), Query Frame = 0
Query: 4 LDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSE 63
L+ ++ S+ W+ WG +LL +G+R +GN +SI++++D W+P PS FKI+S P+
Sbjct: 828 LEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLP 887
Query: 64 NADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPISTSAS-DKWVWHYDKMGKYTVK 123
+V D T + QW++ L + ++VD +++P+++ A D +WHY++ G Y+VK
Sbjct: 888 -LSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVK 947
Query: 124 SGYKL-CIKHSQEASASSAEVESR-----------------------------CGS---- 183
SGY+L C++ + + S V+ CG
Sbjct: 948 SGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFN 1007
Query: 184 --------CPVCREAMETTDPALFLCSRAREVWEGILPWMNE-EFWIPMDIQDRWLSLG- 243
CP C E+ A++LC A+EVW W N E W ++ W +L
Sbjct: 1008 RKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRN-SAWGNVCEEWRVNSFRELWHALQL 1067
Query: 244 DCQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPVRGIVNQG 303
+ L + W +WN RN+ + + + +EF NAN + ++
Sbjct: 1068 SSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNLSHTIHGR 1127
Query: 304 VDDVRRILQGVEE-----IIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGIS 363
+ L G ++ D A + G+G+V ++ G +
Sbjct: 1128 QSSPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNANGEFMAACVRRIQASYG 1187
Query: 364 PLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQS 414
E ++GL FA + + D+ I ++ +C I ++ + +
Sbjct: 1188 ARQTELMATIEGLRFAIDMGFTAAVLEMDAQDCINSILSTEECNGIDGLLIEEVNYLLHN 1247
BLAST of Lag0006229 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 75.1 bits (183), Expect = 1.5e-13
Identity = 104/480 (21.67%), Postives = 179/480 (37.29%), Query Frame = 0
Query: 1 MSVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWI----PRPSTFKI 60
+S+LD SY W + G+ LLK+G R +G+ +I++ D + PRP
Sbjct: 9 VSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRP----- 68
Query: 61 LSHPRSENADMVVADFITETNQ---WDIAKLHQVLGKEDVDEIVRLPISTSAS-DKWVWH 120
+ +M + + WD +K+ Q + + D I R+ ++ S DK +W+
Sbjct: 69 -LNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWN 128
Query: 121 YDKMGKYTVKSGYKLC--------------------------------IKH-----SQEA 180
Y+ G+YTV+SGY L +KH +A
Sbjct: 129 YNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQA 188
Query: 181 SASSAEVESR----CGSCPVCREAMETTDPALFLCSRAREVWEGILPWMNEEFWIPMDIQ 240
A++ + +R SCP C E+ + ALF C A W + + D +
Sbjct: 189 LATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFE 248
Query: 241 DRWLSL-----GDCQSQRLDLISIG-AWAIWNDRNNIHHQR---------LVPNVQTRSE 300
+ ++ S L+ + W IW RNN+ + L +T +
Sbjct: 249 ENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETH-D 308
Query: 301 WILEYLEEFQNANPVRGIVNQGVDDVRRILQGVEEIIMHC--DAAYDEINGSVGIGLVFQ 360
W+ + +P R I ++ + + C DA +D G + +
Sbjct: 309 WLNATQSHKKTPSPTRQIAENKIE-----WRNPPATYVKCNFDAGFDVQKLEATGGWIIR 368
Query: 361 DKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKV 414
+ G ++ +PL AE + +L L + + D T I + +
Sbjct: 369 NHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLI-NGI 428
BLAST of Lag0006229 vs. TAIR 10
Match:
ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 44.3 bits (103), Expect = 2.9e-04
Identity = 18/47 (38.30%), Postives = 29/47 (61.70%), Query Frame = 0
Query: 2 SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWI 49
S+++ S + SY W+ I G +LL RG+ R +G+ I K++ D WI
Sbjct: 98 SMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DX30 | 4.3e-56 | 31.68 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A803NM27 | 5.1e-41 | 27.84 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803NGI9 | 2.8e-39 | 27.08 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PIB6 | 2.4e-38 | 27.35 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A5E4FZN9 | 2.3e-33 | 23.21 | PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 1.5e-13 | 21.67 | Ribonuclease H-like superfamily protein | [more] |
ATMG00310.1 | 2.9e-04 | 38.30 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |