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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCCAACATTTTGGTATGTCAACAATATTTTAAATGCTAGGAAAAATAAAGGATAAGAATTCGAACCTCTAATCTCTTAGTTATGCCAGTTGAGCTATACTCTTGTTGGACAATGTTGGACAATTAGTCATGAGTGTTAAGGATATTAGTTATTTTGTTATGGATTTTTGTTATTTTTCCATGATCTTCTCCATTTTTGTTATTTTATATTTTGTATTATATTATTCATTTGTGTATAAATAGGGTTCAATTGTATATTCTCAAATCACTCAATCAATACAGCCTTTTCATAATCTTTGAAAAGTTTCATGGTAAGAGCTCCCTAATTTCTCTGAGGCTTGATTCCACAAATTTTGTACAGTCGATCTTAAAGGCTCACAAGTTGTTTGGATTTATCGATGGCTCCACTAATTGCCCTCCAAAGACGGTTCCATCATCCACCATATTGTCCTCTACATCGACGGAGACTGCAACTGAAGCACCTCCTGCTCCAGTATCTTCTCAGATTAATCCACTTTATGAGGAGTTACTTTATGAGGAGTGGGTTGCTAAAGATGAAGCTCTAATGACACTGATCAATGCCACTCTGTCGCCGGCAGCCTTAACCTATGTTGTTGGTTGCACATCATCCAAACAAGCCGTGAGGTTCTTGAAAAGCACTACTCTTCGAGCTCAAGAACCAACATCGTCAATTTGA mRNA sequence ATGTCCAACATTTTGTCGATCTTAAAGGCTCACAAGTTGTTTGGATTTATCGATGGCTCCACTAATTGCCCTCCAAAGACGGTTCCATCATCCACCATATTGTCCTCTACATCGACGGAGACTGCAACTGAAGCACCTCCTGCTCCAGTATCTTCTCAGATTAATCCACTTTATGAGGAGTTACTTTATGAGGAGTGGGTTGCTAAAGATGAAGCTCTAATGACACTGATCAATGCCACTCTGTCGCCGGCAGCCTTAACCTATGTTGTTGGTTGCACATCATCCAAACAAGCCGTGAGGTTCTTGAAAAGCACTACTCTTCGAGCTCAAGAACCAACATCGTCAATTTGA Coding sequence (CDS) ATGTCCAACATTTTGTCGATCTTAAAGGCTCACAAGTTGTTTGGATTTATCGATGGCTCCACTAATTGCCCTCCAAAGACGGTTCCATCATCCACCATATTGTCCTCTACATCGACGGAGACTGCAACTGAAGCACCTCCTGCTCCAGTATCTTCTCAGATTAATCCACTTTATGAGGAGTTACTTTATGAGGAGTGGGTTGCTAAAGATGAAGCTCTAATGACACTGATCAATGCCACTCTGTCGCCGGCAGCCTTAACCTATGTTGTTGGTTGCACATCATCCAAACAAGCCGTGAGGTTCTTGAAAAGCACTACTCTTCGAGCTCAAGAACCAACATCGTCAATTTGA Protein sequence MSNILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQAVRFLKSTTLRAQEPTSSI
Homology
BLAST of Lag0037696 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]) HSP 1 Score: 89.0 bits (219), Expect = 3.0e-14 Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 0
Query: 4 ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLY 63
+ +ILKAHKL+GFIDG+ CPP+T S SSTST PP Q NP Y
Sbjct: 46 LTAILKAHKLYGFIDGTNPCPPRTNNS----SSTST-----VPP-----QSNP-----SY 105
Query: 64 EEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ 98
E+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Sbjct: 106 EDWIAKDQALMTVINATLSPEALAYVVGSTSSKQ 120
BLAST of Lag0037696 vs. NCBI nr
Match: XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]) HSP 1 Score: 89.0 bits (219), Expect = 3.0e-14 Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 0
Query: 4 ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLY 63
+ +ILKAHKL+GFIDG+ CPP+T S SSTST PP Q NP Y
Sbjct: 46 LTAILKAHKLYGFIDGTNPCPPRTNNS----SSTST-----VPP-----QSNP-----SY 105
Query: 64 EEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ 98
E+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Sbjct: 106 EDWIAKDQALMTVINATLSPEALAYVVGSTSSKQ 120
BLAST of Lag0037696 vs. NCBI nr
Match: KAA0049700.1 (T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa]) HSP 1 Score: 89.0 bits (219), Expect = 3.0e-14 Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 0
Query: 4 ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLY 63
+ +ILKAHKL+GFIDG+ CPP+T S SSTST PP Q NP Y
Sbjct: 46 LTAILKAHKLYGFIDGTNPCPPRTNNS----SSTST-----VPP-----QSNP-----SY 105
Query: 64 EEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ 98
E+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Sbjct: 106 EDWIAKDQALMTVINATLSPEALAYVVGSTSSKQ 120
BLAST of Lag0037696 vs. NCBI nr
Match: XP_016900446.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]) HSP 1 Score: 89.0 bits (219), Expect = 3.0e-14 Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 0
Query: 4 ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLY 63
+ +ILKAHKL+GFIDG+ CPP+T S SSTST PP Q NP Y
Sbjct: 46 LTAILKAHKLYGFIDGTNPCPPRTNNS----SSTST-----VPP-----QSNP-----SY 105
Query: 64 EEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ 98
E+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Sbjct: 106 EDWIAKDQALMTVINATLSPEALAYVVGSTSSKQ 120
BLAST of Lag0037696 vs. NCBI nr
Match: KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus]) HSP 1 Score: 87.8 bits (216), Expect = 6.6e-14 Identity = 51/94 (54.26%), Postives = 60/94 (63.83%), Query Frame = 0
Query: 4 ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLY 63
+ +ILKAHKLFGF+DG+ CP TS T + PP Q NP LY
Sbjct: 46 LTAILKAHKLFGFVDGTNPCP-----------QTSPSTTSTVPP-----QTNP-----LY 105
Query: 64 EEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ 98
E+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Sbjct: 106 EDWIAKDQALMTVINATLSPEALAYVVGSTSSKQ 118
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008448007.1 | 3.0e-14 | 58.51 | PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo] | [more] |
| XP_008448008.1 | 3.0e-14 | 58.51 | PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo] | [more] |
| KAA0049700.1 | 3.0e-14 | 58.51 | T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa] | [more] |
| XP_016900446.1 | 3.0e-14 | 58.51 | PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo] | [more] |
| KAE8645659.1 | 6.6e-14 | 54.26 | hypothetical protein Csa_020439 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 28..50 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 28..51 |
Relationships
The following mRNA feature(s) are a part of this gene:
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