Lag0028046 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0028046
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr8: 11570487 .. 11573339 (+)
RNA-Seq ExpressionLag0028046
SyntenyLag0028046
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCATTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCTGGTGATCACCCCTTCAAGATACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGATGAAGTCACTGCAAGTGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTAGTGACCACCCCTACAGGTTACTCAGATCACCCAATAAAATGGGGATTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACCCTTGCAGGCTACTCATATCACCCAATAAAATGGGGACTGGTTTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATTACTGAAGGCGAATCTGGTGACTACCCCTACAGGTTACTCAGATCACCCAATAGAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAATTTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGATTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACCCTTGCAGATTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAAGAGTGCATCACTGAAGGCGAATCTGGTGACTACTCCTGCAGGCTACTCAGATTACCCAATAAAATGGGGACTTGTCTAGTAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACCCCTGCAGGTTACTTAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACACAATAAAATTGGGACTGGTCTAGCAAGAGTGAAATCACTGCAAGCGAATTTGGTGACGACTGTTGCACGAAGCTTACACATTCACAGAAGAAAGAAACAAATTGCAAAAAAAAAAAAAACAAAAAACAAAAAAAAAAACGAAAAAAGGGAAAAAAAACGAAAAAAAAAAAACAAAAGTTTCTTACTTGGATCCCTTCTTGAATGCTCTCTGCAATTGATGTGTGCTCTCCCCTACTGAGGTTCCATCTTATTTATAGGGGGAGTTTTAAGTTCAAATAAAAGGTTTAGATAAAGATTTGATTCAAATGAAATCCTATCTCCGGTTCAAAATTTTATGAGATAATCTTTATCTTTATCTGAACCAACTTAATTAAATTGAAATTCCTAAAAGATAAGTGTTTCAATTCAAATCAATTTGGGAATTCAAATTTTATCTAAATAATTTTATTTGGGCATACTCCAAATTTTTCTTCCAAATCAAAATTTGAGATTCAAACATCAAATTCTATTCCAAATGCAAGTTTGAATTTGGTAAAATTTTACCTCAAATTAAATTTTGGCCATAATCCAAATTCTATCCCAAATGGACCAGAGTCCAAACCTCAAATTCTATTCCAAATCCAAGTTAAAATTTGATAGAATTTTACTTCAAATTAAATTTTGGCCATAATCCAAATTCTATCCCAAATGGACTAGAGTTCAAACCTCAAGTTCTATTCCATATGCAAGTTAAAATTGGGTAGGATTTTACCTCAAATCAAAATTTGGGTATAAACCAAATTTTACCCAAACTTGAAATCAAAGTTTGCTGCCAAATAAGGAAAATCAAAATTTTGACCAAACCTCAAATTTTGATTAATTAGCGATAAAAGTGTGTCAAATAAAAAAATAAAAATTTTGACCAAAATTCATATTTTGATTAAATTGACACACCAAATGGAGTCAAAGTCAAGAACAAATACCTTGCATTTTAATTCCAAAATATATTTTTCGAGATTCACTCACACATAACTTGTGCCTAAATCTCGAAAAGGGGGCATTTGTTGAAGGAGAAATTTCGGCCAATCACAAATTGCCACATCATTAATATAAATTAATGATAAAATAAATTTGGGACCAATTATACATTTACACGTGTGCCTAAATTAAATTAATAGACATTAAAATTCGGCAAATCAAAGAATGCCACTTGTCTATTAGTGATCCATCAGATAACATCAGCCAAGTTCAATCAAATTATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATATAGGAGGCCACCATTCATTCAGGGAGGGAGATTGAGATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAGAATTCAACCAACTCAAGACTCAGAAGGTTTGAAGACTAGAAGACTCTAAGAAGAGATCAATAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCTGATTCAACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGTCGATCATCCAAGAAGATCAACAAGTCAACAGACCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCGATCCAAGAGATCATCAACCTAACAGACCGATCATCCAAGAGGATCAATAAGCTAACAAGCCAATCCAACAGATCATCAAGCCAATAG

mRNA sequence

ATGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCATTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCTGGTGATGAAGTCACTGCAAGTGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTAGTGACCACCCCTACAGGCTACTCATATCACCCAATAAAATGGGGACTGGTTTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTTACTCAGATCACCCAATAAAATGGGGATTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGCTACTCAGATTACCCAATAAAATGGGGACTTGTCTAGTAGGAGTGCATCACTGTAGGCAAATCTGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGGCCACCATTCATTCAGGGAGGGAGATTGAGATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAGAATTCAACCAACTCAAGACTCAGAAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCTGATTCAACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGTCGATCATCCAAGAAGATCAACAAGTCAACAGACCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCGATCCAAGAGATCATCAACCTAACAGACCGATCATCCAAGAGGATCAATAAGCTAACAAGCCAATCCAACAGATCATCAAGCCAATAG

Coding sequence (CDS)

ATGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCATTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCTGGTGATGAAGTCACTGCAAGTGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTAGTGACCACCCCTACAGGCTACTCATATCACCCAATAAAATGGGGACTGGTTTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTTACTCAGATCACCCAATAAAATGGGGATTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGCTACTCAGATTACCCAATAAAATGGGGACTTGTCTAGTAGGAGTGCATCACTGTAGGCAAATCTGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGGCCACCATTCATTCAGGGAGGGAGATTGAGATCAGAGAACTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGTCAGAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAGAATTCAACCAACTCAAGACTCAGAAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCTGATTCAACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGTCGATCATCCAAGAAGATCAACAAGTCAACAGACCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCGATCCAAGAGATCATCAACCTAACAGACCGATCATCCAAGAGGATCAATAAGCTAACAAGCCAATCCAACAGATCATCAAGCCAATAG

Protein sequence

MVTTPAGNYSHQSDWSRQVVKSLQLNLMTTVVGESGDEVTASESDDDRCRRVESSDHPYRLLISPNKMGTGLAGVHHCRQIWLLRSPNKMGIGLAGVHHCRQIWLLRLPNKMGTCLVGVHHCRQIWLLRSPNKMGTGLAGVHHCRQIWRPPFIQGGRLRSENSESREFCQSPESSEVRESREFRRSKIQNSTNSRLRRPIIQEDQQANKLIQQIIKPIDRSRRSTSQQTDHPRRSTSQQVDHPRRSTSQQTDHPGRSTSQQADPRDHHANRPIIQEDQQANRPIQEIINLTDRSSKRINKLTSQSNRSSSQ
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..240

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0028046.1Lag0028046.1mRNA