Lag0031865 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAAAGGGATGGTTGATAGCATCAAGATGTGTTTGGTTCGTCTGTATAATTTTTACATGTCAAAGTCACATGATGATATTTCTAGTTCTAGTACTCAAAGTTCTAGTAGTGATCATCAACAATCAGAATGTAGTTTTACTTCTTTGAGTATGGAATCTGGTGCAAGTCCGAGTGCATCAAATTTGGCTCGGTACAAGAGAAGAAGAGAAGAAAAAAGTTCTTTAGAATTGAAGGATGATGTGGATCGATATTTATCTGACGAATGTGTGGAACTTAATGATAAATTTGATGTTTTGGCTTGGTGGAAACTGAATGAGTCTAGATATCAAGTTTTATCAAAAATCGCTCGAGATGTTTTGGCAGTTCCAGTGTCTACCGTGGCTTCTGAATCAGCATTTAGTACTGGAGGAGGATTCTTAATTCTTGTAGAAGTTCTTTGA ATGGTTAAAGGGATGGTTGATAGCATCAAGATGTGTTTGGTTCGTCTGTATAATTTTTACATGTCAAAGTCACATGATGATATTTCTAGTTCTAGTACTCAAAGTTCTAGTAGTGATCATCAACAATCAGAATGTAGTTTTACTTCTTTGAGTATGGAATCTGGTGCAAGTCCGAGTGCATCAAATTTGGCTCGGTACAAGAGAAGAAGAGAAGAAAAAAGTTCTTTAGAATTGAAGGATGATGTGGATCGATATTTATCTGACGAATGTGTGGAACTTAATGATAAATTTGATGTTTTGGCTTGGTGGAAACTGAATGAGTCTAGATATCAAGTTTTATCAAAAATCGCTCGAGATGTTTTGGCAGTTCCAGTGTCTACCGTGGCTTCTGAATCAGCATTTAGTACTGGAGGAGGATTCTTAATTCTTGTAGAAGTTCTTTGA ATGGTTAAAGGGATGGTTGATAGCATCAAGATGTGTTTGGTTCGTCTGTATAATTTTTACATGTCAAAGTCACATGATGATATTTCTAGTTCTAGTACTCAAAGTTCTAGTAGTGATCATCAACAATCAGAATGTAGTTTTACTTCTTTGAGTATGGAATCTGGTGCAAGTCCGAGTGCATCAAATTTGGCTCGGTACAAGAGAAGAAGAGAAGAAAAAAGTTCTTTAGAATTGAAGGATGATGTGGATCGATATTTATCTGACGAATGTGTGGAACTTAATGATAAATTTGATGTTTTGGCTTGGTGGAAACTGAATGAGTCTAGATATCAAGTTTTATCAAAAATCGCTCGAGATGTTTTGGCAGTTCCAGTGTCTACCGTGGCTTCTGAATCAGCATTTAGTACTGGAGGAGGATTCTTAATTCTTGTAGAAGTTCTTTGA MVKGMVDSIKMCLVRLYNFYMSKSHDDISSSSTQSSSSDHQQSECSFTSLSMESGASPSASNLARYKRRREEKSSLELKDDVDRYLSDECVELNDKFDVLAWWKLNESRYQVLSKIARDVLAVPVSTVASESAFSTGGGFLILVEVL Homology
BLAST of Lag0031865 vs. NCBI nr
Match: KAA0031947.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 131.3 bits (329), Expect = 6.6e-27 Identity = 80/149 (53.69%), Postives = 105/149 (70.47%), Query Frame = 0
BLAST of Lag0031865 vs. NCBI nr
Match: KAA0067548.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 130.6 bits (327), Expect = 1.1e-26 Identity = 77/144 (53.47%), Postives = 100/144 (69.44%), Query Frame = 0
BLAST of Lag0031865 vs. NCBI nr
Match: TYK16769.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 130.6 bits (327), Expect = 1.1e-26 Identity = 77/144 (53.47%), Postives = 100/144 (69.44%), Query Frame = 0
BLAST of Lag0031865 vs. NCBI nr
Match: KAA0050616.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 130.6 bits (327), Expect = 1.1e-26 Identity = 77/144 (53.47%), Postives = 100/144 (69.44%), Query Frame = 0
BLAST of Lag0031865 vs. NCBI nr
Match: KAA0065439.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa] >TYK07824.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 130.6 bits (327), Expect = 1.1e-26 Identity = 77/144 (53.47%), Postives = 100/144 (69.44%), Query Frame = 0
BLAST of Lag0031865 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 4.5e-10 Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of Lag0031865 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.5e-10 Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of Lag0031865 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.5e-09 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of Lag0031865 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.2e-08 Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0
BLAST of Lag0031865 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.2e-08 Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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