Lag0030711 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTACGACATGTCGACTTCTTTGTCTTTCTGGTTTTTTCTTTGGGGGGTTCTGTTTTTCTGATCTTTGATCTTTTTTTTTTTTTTTTTTTTTGCAGAAGGTGATTGTGAAATTGGATGTTCAAGATGATAAATCTAAGCAAAAAGCTATGAGCACTGTGTCTAGTCTATCAGGTACTCAATTGAATTTCTGAATTTGTCCAAATCAGAATTTATTTTCATTCTTGATGGATCATTGAAATAACCCATCATTTATTAGAGAAACAAAATCAACCCCATCTCTTAAAACCTGTCACTTGAGTCTCTCTCTGTTTTTCTCCAAACCAAATGAATTTGCTTTTTTCATTTTTCATGGAAAATTGAAAGAACCCATTATTTTACAAGCAAAACAAAAACAAACCCATGTCTTAAAATCAGTCATCTCTCTCTCTCTCTCTTTTTCTGTCTTGTTTGGCTTATGAGAAAACAGAAGAAAAGAAAACACAAAAACCAAAAAAGTTTCCTTTTTCCCTCCTTTTCATGGGAAAATCAAAAGGACCCATTATTTCACAAGAAAAACAAAAACAAACCCATGTCTTGATTCTTAAAATCAGCCATCTTTCTGTCTCTCTATCCTGTTTGGCTTCAGAGAAAACAGAAGAAAAGAAAACCAAAACCAAAAAAATTCCCCCTTTTCCCCTTTTCATGGAAAATCAAAAGGACCCATTACTTCACAAGAAAAACAAAAACAAACCCATGTCTAAAAATCATCCATCTTTGTCCTGTTTGGCTTAAAATTGATTGGGTAAATTCTTGCAGGAGTGAACTCAATCTCAATGGACATGAAAGAGAAGAAACTGACAGTAACAGGGGATGTAGATCCAGTGGTGATAGTGAGCAAACTGAGGAAAATTTGTCACACAGTGATAGTATCAGTTGGACCAGAGAAAGAAGAGAAGAAACCAGAGCCAAAGAAAGATGAGCCTAAGAAGGAAGATCCCAAAAAGGCAGCTGAGGAAAAGAAGAAAGAAGAACAAAGAATTGCTGAGTATATCAAGGCTATGGAAGCCTATCGTAAACTCTATCCACCAATGTATTATCCTCCTAGAACCATAAGCATTGAAGAAGATCCAAATGGTTGTGTTATTTGTTAA ATGAAGAAGGTGATTGTGAAATTGGATGTTCAAGATGATAAATCTAAGCAAAAAGCTATGAGCACTGTGTCTAGTCTATCAGGAGTGAACTCAATCTCAATGGACATGAAAGAGAAGAAACTGACAGTAACAGGGGATGTAGATCCAGTGGTGATAGTGAGCAAACTGAGGAAAATTTGTCACACAGTGATAGTATCAGTTGGACCAGAGAAAGAAGAGAAGAAACCAGAGCCAAAGAAAGATGAGCCTAAGAAGGAAGATCCCAAAAAGGCAGCTGAGGAAAAGAAGAAAGAAGAACAAAGAATTGCTGAGTATATCAAGGCTATGGAAGCCTATCGTAAACTCTATCCACCAATGTATTATCCTCCTAGAACCATAAGCATTGAAGAAGATCCAAATGGTTGTGTTATTTGTTAA ATGAAGAAGGTGATTGTGAAATTGGATGTTCAAGATGATAAATCTAAGCAAAAAGCTATGAGCACTGTGTCTAGTCTATCAGGAGTGAACTCAATCTCAATGGACATGAAAGAGAAGAAACTGACAGTAACAGGGGATGTAGATCCAGTGGTGATAGTGAGCAAACTGAGGAAAATTTGTCACACAGTGATAGTATCAGTTGGACCAGAGAAAGAAGAGAAGAAACCAGAGCCAAAGAAAGATGAGCCTAAGAAGGAAGATCCCAAAAAGGCAGCTGAGGAAAAGAAGAAAGAAGAACAAAGAATTGCTGAGTATATCAAGGCTATGGAAGCCTATCGTAAACTCTATCCACCAATGTATTATCCTCCTAGAACCATAAGCATTGAAGAAGATCCAAATGGTTGTGTTATTTGTTAA MKKVIVKLDVQDDKSKQKAMSTVSSLSGVNSISMDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPEPKKDEPKKEDPKKAAEEKKKEEQRIAEYIKAMEAYRKLYPPMYYPPRTISIEEDPNGCVIC Homology
BLAST of Lag0030711 vs. NCBI nr
Match: XP_008437534.1 (PREDICTED: FK506-binding protein 4-like [Cucumis melo] >ADN33773.1 metal ion binding protein [Cucumis melo subsp. melo] >KAA0042592.1 FK506-binding protein 4-like [Cucumis melo var. makuwa] >TYK05995.1 FK506-binding protein 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54 Identity = 124/141 (87.94%), Postives = 131/141 (92.91%), Query Frame = 0
BLAST of Lag0030711 vs. NCBI nr
Match: XP_022922258.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata] >XP_023549811.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo] >KAG6579367.1 Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51 Identity = 116/139 (83.45%), Postives = 129/139 (92.81%), Query Frame = 0
BLAST of Lag0030711 vs. NCBI nr
Match: XP_004145901.1 (heavy metal-associated isoprenylated plant protein 39 [Cucumis sativus] >KGN49919.1 hypothetical protein Csa_000191 [Cucumis sativus]) HSP 1 Score: 211.5 bits (537), Expect = 4.7e-51 Identity = 122/144 (84.72%), Postives = 128/144 (88.89%), Query Frame = 0
BLAST of Lag0030711 vs. NCBI nr
Match: XP_022973069.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita maxima]) HSP 1 Score: 210.7 bits (535), Expect = 8.1e-51 Identity = 116/139 (83.45%), Postives = 128/139 (92.09%), Query Frame = 0
BLAST of Lag0030711 vs. NCBI nr
Match: XP_038906483.1 (heavy metal-associated isoprenylated plant protein 39-like [Benincasa hispida]) HSP 1 Score: 210.3 bits (534), Expect = 1.1e-50 Identity = 116/141 (82.27%), Postives = 130/141 (92.20%), Query Frame = 0
BLAST of Lag0030711 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.8e-22 Identity = 82/180 (45.56%), Postives = 102/180 (56.67%), Query Frame = 0
BLAST of Lag0030711 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16 Identity = 62/136 (45.59%), Postives = 81/136 (59.56%), Query Frame = 0
BLAST of Lag0030711 vs. ExPASy Swiss-Prot
Match: Q9LTE2 (Heavy metal-associated isoprenylated plant protein 13 OS=Arabidopsis thaliana OX=3702 GN=HIPP13 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-10 Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = 0
BLAST of Lag0030711 vs. ExPASy Swiss-Prot
Match: Q9LTE1 (Heavy metal-associated isoprenylated plant protein 14 OS=Arabidopsis thaliana OX=3702 GN=HIPP14 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.1e-09 Identity = 38/84 (45.24%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of Lag0030711 vs. ExPASy Swiss-Prot
Match: Q8GWS3 (Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=3702 GN=HIPP02 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08 Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|