ClCG04G008097 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGCAATTGTTCATTCAACACAGTGGGACATGGGATGACAGCAAATGAAGTTAATGGAGGTGTTTTAAAGGGCATCATTATGCCACTAACATTGTCATACCAAGAACTGAAGGACCGGGTCTATGGAATAGCAAGGGTCGATTTATTAGAATTTGACATTGTAATGAGGGTTCAGTATAAGTTGGACTTGTACAGACCTGTGGTATGCCTAACCGACGATGACAACACACTATCGGTGAGTTTGACATTTTCCCTTCCGTGGTATCCATGGGAAATGACGACACTAATCCATGAGATGAGAGAGGCGTTTCACAATTCTAGCCAGAAGAGGGTTCGTAATTCTGAAGTGGATGCACCCACGGTTAATGATCTGAATTTCAATGGTGGAGGTGAGTGGGATGGGAATTGTCATGAGGACGTTGGGTATGATCCTCCTGTAAATGAGTTCATGCCTGCTATAGTGTTTGATACGCATTGGACACCAATTGTGCATCCTGTGTTCAATGCGCCATTGGAAACTCCAATTCTTCCCACCACTCTCAACCCTTCTCCTCTTAGATACCACGGAGGGTCAACAGGGCACTCCTCATGA ATGGAAAGCAATTGTTCATTCAACACAGTGGGACATGGGATGACAGCAAATGAAGTTAATGGAGGTGTTTTAAAGGGCATCATTATGCCACTAACATTGTCATACCAAGAACTGAAGGACCGGGTCTATGGAATAGCAAGGGTCGATTTATTAGAATTTGACATTGTAATGAGGGTTCAGTATAAGTTGGACTTGTACAGACCTGTGGTATGCCTAACCGACGATGACAACACACTATCGGTGAGTTTGACATTTTCCCTTCCGTGGTATCCATGGGAAATGACGACACTAATCCATGAGATGAGAGAGGCGTTTCACAATTCTAGCCAGAAGAGGGTTCGTAATTCTGAAGTGGATGCACCCACGGTTAATGATCTGAATTTCAATGGTGGAGGTGAGTGGGATGGGAATTGTCATGAGGACGTTGGGTATGATCCTCCTGTAAATGAGTTCATGCCTGCTATAGTGTTTGATACGCATTGGACACCAATTGTGCATCCTGTGTTCAATGCGCCATTGGAAACTCCAATTCTTCCCACCACTCTCAACCCTTCTCCTCTTAGATACCACGGAGGGTCAACAGGGCACTCCTCATGA ATGGAAAGCAATTGTTCATTCAACACAGTGGGACATGGGATGACAGCAAATGAAGTTAATGGAGGTGTTTTAAAGGGCATCATTATGCCACTAACATTGTCATACCAAGAACTGAAGGACCGGGTCTATGGAATAGCAAGGGTCGATTTATTAGAATTTGACATTGTAATGAGGGTTCAGTATAAGTTGGACTTGTACAGACCTGTGGTATGCCTAACCGACGATGACAACACACTATCGGTGAGTTTGACATTTTCCCTTCCGTGGTATCCATGGGAAATGACGACACTAATCCATGAGATGAGAGAGGCGTTTCACAATTCTAGCCAGAAGAGGGTTCGTAATTCTGAAGTGGATGCACCCACGGTTAATGATCTGAATTTCAATGGTGGAGGTGAGTGGGATGGGAATTGTCATGAGGACGTTGGGTATGATCCTCCTGTAAATGAGTTCATGCCTGCTATAGTGTTTGATACGCATTGGACACCAATTGTGCATCCTGTGTTCAATGCGCCATTGGAAACTCCAATTCTTCCCACCACTCTCAACCCTTCTCCTCTTAGATACCACGGAGGGTCAACAGGGCACTCCTCATGA MESNCSFNTVGHGMTANEVNGGVLKGIIMPLTLSYQELKDRVYGIARVDLLEFDIVMRVQYKLDLYRPVVCLTDDDNTLSVSLTFSLPWYPWEMTTLIHEMREAFHNSSQKRVRNSEVDAPTVNDLNFNGGGEWDGNCHEDVGYDPPVNEFMPAIVFDTHWTPIVHPVFNAPLETPILPTTLNPSPLRYHGGSTGHSS Homology
BLAST of ClCG04G008097 vs. NCBI nr
Match: XP_038888098.1 (uncharacterized protein LOC120078004 [Benincasa hispida]) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-07 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of ClCG04G008097 vs. NCBI nr
Match: XP_038902319.1 (trichohyalin-like [Benincasa hispida]) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-05 Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of ClCG04G008097 vs. NCBI nr
Match: XP_022154925.1 (uncharacterized protein LOC111022071 [Momordica charantia]) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-05 Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 0
BLAST of ClCG04G008097 vs. NCBI nr
Match: XP_038891939.1 (uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]) HSP 1 Score: 56.2 bits (134), Expect = 3.7e-04 Identity = 22/55 (40.00%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of ClCG04G008097 vs. NCBI nr
Match: XP_038891938.1 (uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]) HSP 1 Score: 56.2 bits (134), Expect = 3.7e-04 Identity = 22/55 (40.00%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of ClCG04G008097 vs. ExPASy TrEMBL
Match: A0A6J1DL08 (uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022071 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 7.2e-06 Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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