ClCG05G018600 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCGTGGGAAGATCCAGATCAAGAGAATCGAAAACCCCACAAACAGGCAAGTCACTTACTCCAAACGACGCAACGGCCTCTTCAAAAAGGCCAACGAACTCACCGTCCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCTAGCACTGGAAAACTCCACGAGTATATCAGCCCTGCCACTTCGTAATAATCTCTCAAACTAACCCTACTTTTTTTTCTTTTTATTTCTTTCTAATTTCCTCTTCATATTAATAATCTCTCTTTCATTTAGGACCAAGGAGCTTTTCGATCAGTACCAGAAGACTTTAGGCGTTGATTTATGGATCTCTCACTATGAGGTCTTTTAATTGCCTTCCTGATTTATCTCTCATATTTTTACTTAATTCATCATTCTTTTATGTAATTTGTAATTTGGGGCTGTACCTACGTCCAGAGAATGCAAGACAATCTGAAGAAGCTTAAAGATGTGAATCGAAATCTCCGCAAGCAGATTAGGTACGCTACATTCATCATTCATCATTCATCCTCATCTCTACTTTTTTTTTTTTTTTTTTTAATTTAAATATGATTAATTAATTTTATATAGGCAGAGGATGGGGGAATGTATGAATGATCTGAGTTTTGAAGAACTGCGCTGTCTTGAGCAAGATATGGATAATGCTGTCAGGATCATCCGTGAACGCAAGGTGCGCGACAAATCCATTATTTCCTTTTTTTTATTATTCTTAACTAATTGCCTCAAAGGTAGTTTACAATTATAATCTCCATTTTTTTTTTTAGTTGGTTCTATAACTAAGATCAGTAGTTGTAGTTTGTCTCGGGAGTTGGGTTTAAATGTTTTTTTTTAATTAATTTTTGTGGTTGATGTGCTTAATACATCGCTCCTATTTTAGATAATAATTATTATTTTTTGGTTTATTACATGTTTAGGAATGATTTTGAGAGAGTCAGTACCATTTTTGTCATTTTTTAAAATCACTCTCAAATATGTCTTTTATCATTCAATAACAATTTTGATAATATAAAAATTTTATTTGAAAATGTAAAACTAGGTACTAAATTGATTTTAATATGATTAAATCAAACATATAATTAATCAGTTTTCTCTTTTAGAGAGATTTGCAAATGCTTAATAATTAACTATATCCTACAAACACTATATTTTGATTTTAAGCATAATAATGGGGTGAACGCTTGCGTCGAGATACCCTTTTAGAACAATTATGACTCTATTAGATAATTTTTTTATTTTTAGTTTTTTTAAATTATGTTTTCTATAACAATTTATATACCACGGTTTACATATTTTCTAAATTGCATTTTAATTCTTAGGCAATTTTTTTGTTTACATAAATCTGGGTGACACAAACATATACATAATTTGTTTTTGACAAAGATACATATAATATGAATCTAGAATACCTTTAACACCTTCATCATCTCCCGCATTCCTTCATTAATATTCAATAATAACGGGAGTCCAAAAGAACATTACAAGAGGGGCTAGAGTGAAGCCCAATAGAAGAAGTGGATTACATAACGCCAACAAGATTGAGGGCAATGGGAGGAAGGGTGCACCCTCATCATCTCCCAAGATTGAGGGACAAGTTGGATTACGTATATATACAATATTAAGCATACATTATCCAAATATTTTCTTTTTGGACGAAAACAAGAGGCAAGGGAGATCAATAGGTACATCAAGATATCTCAATTAAGTTGAATAATCACTGAATTATCCAAAATATGCTATATATAGCTAATTTTTTTGGGAATGGACGATCATCATACCTTTTTTAAATAATTGAAGTCCTTAACTTGATCCCAATTTAGAAAGTAAATTTCATTTTGAGAGTGATTTTAAAACTCTTAAAAACGACAAGTTCACACATGGACACTAAAATATACTCTTAATCATCTCAAATTAATTTTGGTCCTATAGAAACCAAAAAGTACAAAACTTAATATTAAATTCACTATAAATCATTAGAGGCATGTTTAATAGTAATTTTTTTTAATCATTTATTCATAATCTCTCTTTCACATGTCCTAAACATTGCATATTAAAAGATTCCATGAGAATTAGTAAACTATATTAATCCTATTGCGGATGCTATTACATTTCAAATTCTGGTTGACAGCCATTTTAAATTACGGATAGTATGTGCATCTTAATAGTCACACATAATGGTTAATATATATATATAGGAGCGATCTTGCATGCATAATGCAACTCTACATATTTGCCTTTTGCATGGTAATATGTTTTTCTACGTATTACATTGACCAGTTCCGTTTGAAACTTTGATCCACAGTACCGGGTGATATTAAACCAGATTGAAACGCACAAGAAGAAGGTAATTCAAGCCATATAATTTCTTTATTGAAATGTTGTTTGGGAGGTTTCGTTTGGTATCAGGTAAAAATTTGAAGTAATTGGATTACTATTTCTACGTCAGTAATACTTAAACTACGTACTAGCTGGTATTAAAAAAAGGTTTACCACAATGAAGATAGAACTATGTTGTTGGATTGCAATCTAGCTGACAGACAAGTATTACCTATCTAAATTTGTTTCTTCAAATATTGTCTGGAGTAAGTTTCACTTTAAAAACAAAAATATTTGAATGCATCTTAAACTACATTTATTACTGTGCATTATACCAAATTGTTCAATCATATTTTACAACGTGACAAATTCATTTTACTTCTTTTTCAAAATATTTTAAGTTTTCTTTTGTGTGTTTGATAAGAGTGGGATGCACAATGAAGATATGTTCGGAACGATCTTTCAAGTGATAATTTTACCTACTTAAATTCAGGATAATTGAATGGGTAGTACTTTTAGGGCTAATTATTAAGTGTATAGCAACATTTTTAAAAAATTGCAAATATAGCAAAGGGTAAGCACTTTTAAAAATAATAATTACGTATATAGTAACATTCTAAAAAATTTACAAATATAAAAAAATCTATCAATGATATACCCTATCGCTAATACGTCTCTACTAATGATATAATAAATTTCTATAAATGATATGGTATATTACAGACTTCGGAAGTAGATTTTAAATTTCATATTTGCAAATTTCTTTTGCATTATGCTATATATGCAAATACTTGACCCCGATTACTATGTTTGCAACTTTTCCTGTAGCAAAATCTATCAATAATAGATTGTATTGTTGATAGACTTCTATTAGCGATACATTCTACAACAAATAGACTACAAGAGCTTGATCTAAATTATGTTATATCTGAAATTTCATTTTGCATTGTGTTATATTTGTTAATATTTGAGCAATATATTTGGGTGCATCATGAACCGGGCAGCCCACTTCAATTACACCAGGAAAAAAAAACTAAAAAAGTAAGAATTAGTGATTTGATAATCAAGTTTTTCTATTAACATGATATTATTTTGATGTGTGAACAATGCAGTTAAAGAGCGTGGGACAAATACACAAGAGTCTACTACAGGAGTTTGTAAGTGTGATTATTATAGTTGTAAATACATGATATGCATTTAGTTAAGAAAGGAAAATAGAAATGGTTGAAAGTTTATGGTGCGTCTTTGTTATGGGAATGGCATGGCAGGATATTGCAACAGAGGAAGATCCACATTATGGGCTGGTAGACAATGGAGGAGTAGGAGTTGGAATAGGAGATTATGAGTCAATTATGGGATTCCCAGGCGGTGGACATCCTCGCATATTTGCATTGCGCCTCCAGCCCAACCACGGCCATAGCCATACCCACACCCACACCCACAACCACAACCATCCTAATATTCATGTTCATCCACCTTCAGATCTCACTACCTATCCACTACTCGAGTAG ATGGCTCGTGGGAAGATCCAGATCAAGAGAATCGAAAACCCCACAAACAGGCAAGTCACTTACTCCAAACGACGCAACGGCCTCTTCAAAAAGGCCAACGAACTCACCGTCCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCTAGCACTGGAAAACTCCACGAGTATATCAGCCCTGCCACTTCGACCAAGGAGCTTTTCGATCAGTACCAGAAGACTTTAGGCGTTGATTTATGGATCTCTCACTATGAGAGAATGCAAGACAATCTGAAGAAGCTTAAAGATGTGAATCGAAATCTCCGCAAGCAGATTAGGCAGAGGATGGGGGAATGTATGAATGATCTGAGTTTTGAAGAACTGCGCTGTCTTGAGCAAGATATGGATAATGCTGTCAGGATCATCCGTGAACGCAAGTACCGGGTGATATTAAACCAGATTGAAACGCACAAGAAGAAGTTAAAGAGCGTGGGACAAATACACAAGAGTCTACTACAGGAGTTTGATATTGCAACAGAGGAAGATCCACATTATGGGCTGGTAGACAATGGAGGAGTAGGAGTTGGAATAGGAGATTATGAGTCAATTATGGGATTCCCAGGCGGTGGACATCCTCGCATATTTGCATTGCGCCTCCAGCCCAACCACGGCCATAGCCATACCCACACCCACACCCACAACCACAACCATCCTAATATTCATGTTCATCCACCTTCAGATCTCACTACCTATCCACTACTCGAGTAG ATGGCTCGTGGGAAGATCCAGATCAAGAGAATCGAAAACCCCACAAACAGGCAAGTCACTTACTCCAAACGACGCAACGGCCTCTTCAAAAAGGCCAACGAACTCACCGTCCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCTAGCACTGGAAAACTCCACGAGTATATCAGCCCTGCCACTTCGACCAAGGAGCTTTTCGATCAGTACCAGAAGACTTTAGGCGTTGATTTATGGATCTCTCACTATGAGAGAATGCAAGACAATCTGAAGAAGCTTAAAGATGTGAATCGAAATCTCCGCAAGCAGATTAGGCAGAGGATGGGGGAATGTATGAATGATCTGAGTTTTGAAGAACTGCGCTGTCTTGAGCAAGATATGGATAATGCTGTCAGGATCATCCGTGAACGCAAGTACCGGGTGATATTAAACCAGATTGAAACGCACAAGAAGAAGTTAAAGAGCGTGGGACAAATACACAAGAGTCTACTACAGGAGTTTGATATTGCAACAGAGGAAGATCCACATTATGGGCTGGTAGACAATGGAGGAGTAGGAGTTGGAATAGGAGATTATGAGTCAATTATGGGATTCCCAGGCGGTGGACATCCTCGCATATTTGCATTGCGCCTCCAGCCCAACCACGGCCATAGCCATACCCACACCCACACCCACAACCACAACCATCCTAATATTCATGTTCATCCACCTTCAGATCTCACTACCTATCCACTACTCGAGTAG MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVILNQIETHKKKLKSVGQIHKSLLQEFDIATEEDPHYGLVDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSDLTTYPLLE Homology
BLAST of ClCG05G018600 vs. NCBI nr
Match: XP_038897180.1 (agamous-like MADS-box protein AP3 [Benincasa hispida]) HSP 1 Score: 447.2 bits (1149), Expect = 9.2e-122 Identity = 228/250 (91.20%), Postives = 234/250 (93.60%), Query Frame = 0
BLAST of ClCG05G018600 vs. NCBI nr
Match: KAE8651338.1 (hypothetical protein Csa_000950 [Cucumis sativus]) HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-118 Identity = 227/252 (90.08%), Postives = 234/252 (92.86%), Query Frame = 0
BLAST of ClCG05G018600 vs. NCBI nr
Match: XP_008466510.1 (PREDICTED: floral homeotic protein DEFICIENS isoform X1 [Cucumis melo]) HSP 1 Score: 434.1 bits (1115), Expect = 8.1e-118 Identity = 226/252 (89.68%), Postives = 232/252 (92.06%), Query Frame = 0
BLAST of ClCG05G018600 vs. NCBI nr
Match: XP_016903517.1 (PREDICTED: floral homeotic protein DEFICIENS isoform X2 [Cucumis melo] >KAA0063259.1 floral homeotic protein DEFICIENS isoform X1 [Cucumis melo var. makuwa] >TYK31515.1 floral homeotic protein DEFICIENS isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 434.1 bits (1115), Expect = 8.1e-118 Identity = 226/252 (89.68%), Postives = 232/252 (92.06%), Query Frame = 0
BLAST of ClCG05G018600 vs. NCBI nr
Match: NP_001295864.1 (floral homeotic protein DEFICIENS [Cucumis sativus] >AAX37273.1 MADS box protein [Cucumis sativus]) HSP 1 Score: 432.2 bits (1110), Expect = 3.1e-117 Identity = 225/252 (89.29%), Postives = 233/252 (92.46%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy Swiss-Prot
Match: P23706 (Floral homeotic protein DEFICIENS OS=Antirrhinum majus OX=4151 GN=DEFA PE=1 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.1e-82 Identity = 163/248 (65.73%), Postives = 197/248 (79.44%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy Swiss-Prot
Match: Q07472 (Floral homeotic protein PMADS 1 OS=Petunia hybrida OX=4102 GN=PMADS1 PE=2 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.5e-82 Identity = 167/248 (67.34%), Postives = 204/248 (82.26%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy Swiss-Prot
Match: E0CPH4 (Agamous-like MADS-box protein AP3 OS=Vitis vinifera OX=29760 GN=AP3 PE=2 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 2.6e-82 Identity = 157/215 (73.02%), Postives = 187/215 (86.98%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy Swiss-Prot
Match: Q003J2 (Agamous-like MADS-box protein TM6 OS=Vitis vinifera OX=29760 GN=TM6 PE=2 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.2e-69 Identity = 135/220 (61.36%), Postives = 171/220 (77.73%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy Swiss-Prot
Match: P35632 (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana OX=3702 GN=AP3 PE=1 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 5.5e-69 Identity = 144/250 (57.60%), Postives = 182/250 (72.80%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy TrEMBL
Match: A0A5A7VCD1 (Floral homeotic protein DEFICIENS isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008350 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.9e-118 Identity = 226/252 (89.68%), Postives = 232/252 (92.06%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy TrEMBL
Match: A0A1S4E5M2 (floral homeotic protein DEFICIENS isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503901 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.9e-118 Identity = 226/252 (89.68%), Postives = 232/252 (92.06%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy TrEMBL
Match: A0A1S3CSQ5 (floral homeotic protein DEFICIENS isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503901 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.9e-118 Identity = 226/252 (89.68%), Postives = 232/252 (92.06%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy TrEMBL
Match: Q58IJ2 (MADS box protein OS=Cucumis sativus OX=3659 GN=MADS1 PE=2 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 1.5e-117 Identity = 225/252 (89.29%), Postives = 233/252 (92.46%), Query Frame = 0
BLAST of ClCG05G018600 vs. ExPASy TrEMBL
Match: A0A6J1C324 (floral homeotic protein DEFICIENS OS=Momordica charantia OX=3673 GN=LOC111007978 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 1.0e-113 Identity = 220/248 (88.71%), Postives = 224/248 (90.32%), Query Frame = 0
BLAST of ClCG05G018600 vs. TAIR 10
Match: AT3G54340.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 262.3 bits (669), Expect = 3.9e-70 Identity = 144/250 (57.60%), Postives = 182/250 (72.80%), Query Frame = 0
BLAST of ClCG05G018600 vs. TAIR 10
Match: AT5G20240.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 125.9 bits (315), Expect = 4.4e-29 Identity = 64/167 (38.32%), Postives = 105/167 (62.87%), Query Frame = 0
BLAST of ClCG05G018600 vs. TAIR 10
Match: AT4G11880.1 (AGAMOUS-like 14 ) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26 Identity = 73/177 (41.24%), Postives = 118/177 (66.67%), Query Frame = 0
BLAST of ClCG05G018600 vs. TAIR 10
Match: AT2G45650.1 (AGAMOUS-like 6 ) HSP 1 Score: 117.5 bits (293), Expect = 1.6e-26 Identity = 67/180 (37.22%), Postives = 109/180 (60.56%), Query Frame = 0
BLAST of ClCG05G018600 vs. TAIR 10
Match: AT5G60910.1 (AGAMOUS-like 8 ) HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26 Identity = 74/173 (42.77%), Postives = 110/173 (63.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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