ClCG02G020590 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCGTCTGCATTTCCAACTGCATCAACGACGCCCGACTCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGCTCTAAGCTCAATCGAACTTCGCGAGTCGTCGATAGCATCTCTTGTCGTCAGATGTACCTCCGAAGCTATACCTTCTCTCGAGAAGACGAGCACGTGCCGGAGACCAAGACTAATAAGTGCTTCGCTAAAGTCGGAATGCGCCAGAAAATTTCTCGCCGGAAAAAGAAGAAGACGGCGGCGGAGGCGGACGACGGCAGCAGCGGCGGCGGCGCTGAGAAGACTAGAAAGTCTTCGAGGCTGAAAAAGGCTAAGGAACTTTCGTGCGCCGCCTTGACGTCCGTCTTCCGACGGTTGCTATCGTGCACCGCTAAAGTCGATGTGGCCGATAATTTGCGAGAGGTCCATTAG ATGGCCTCCGTCTGCATTTCCAACTGCATCAACGACGCCCGACTCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGCTCTAAGCTCAATCGAACTTCGCGAGTCGTCGATAGCATCTCTTGTCGTCAGATGTACCTCCGAAGCTATACCTTCTCTCGAGAAGACGAGCACGTGCCGGAGACCAAGACTAATAAGTGCTTCGCTAAAGTCGGAATGCGCCAGAAAATTTCTCGCCGGAAAAAGAAGAAGACGGCGGCGGAGGCGGACGACGGCAGCAGCGGCGGCGGCGCTGAGAAGACTAGAAAGTCTTCGAGGCTGAAAAAGGCTAAGGAACTTTCGTGCGCCGCCTTGACGTCCGTCTTCCGACGGTTGCTATCGTGCACCGCTAAAGTCGATGTGGCCGATAATTTGCGAGAGGTCCATTAG ATGGCCTCCGTCTGCATTTCCAACTGCATCAACGACGCCCGACTCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGCTCTAAGCTCAATCGAACTTCGCGAGTCGTCGATAGCATCTCTTGTCGTCAGATGTACCTCCGAAGCTATACCTTCTCTCGAGAAGACGAGCACGTGCCGGAGACCAAGACTAATAAGTGCTTCGCTAAAGTCGGAATGCGCCAGAAAATTTCTCGCCGGAAAAAGAAGAAGACGGCGGCGGAGGCGGACGACGGCAGCAGCGGCGGCGGCGCTGAGAAGACTAGAAAGTCTTCGAGGCTGAAAAAGGCTAAGGAACTTTCGTGCGCCGCCTTGACGTCCGTCTTCCGACGGTTGCTATCGTGCACCGCTAAAGTCGATGTGGCCGATAATTTGCGAGAGGTCCATTAG MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQMYLRSYTFSREDEHVPETKTNKCFAKVGMRQKISRRKKKKTAAEADDGSSGGGAEKTRKSSRLKKAKELSCAALTSVFRRLLSCTAKVDVADNLREVH Homology
BLAST of ClCG02G020590 vs. NCBI nr
Match: XP_038902301.1 (uncharacterized protein LOC120088935 [Benincasa hispida]) HSP 1 Score: 269.2 bits (687), Expect = 2.1e-68 Identity = 143/156 (91.67%), Postives = 146/156 (93.59%), Query Frame = 0
BLAST of ClCG02G020590 vs. NCBI nr
Match: KAA0035268.1 (uncharacterized protein E6C27_scaffold228G00590 [Cucumis melo var. makuwa]) HSP 1 Score: 267.3 bits (682), Expect = 8.1e-68 Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of ClCG02G020590 vs. NCBI nr
Match: XP_004148240.1 (uncharacterized protein LOC101218723 [Cucumis sativus]) HSP 1 Score: 263.8 bits (673), Expect = 9.0e-67 Identity = 138/154 (89.61%), Postives = 142/154 (92.21%), Query Frame = 0
BLAST of ClCG02G020590 vs. NCBI nr
Match: XP_008463974.1 (PREDICTED: uncharacterized protein LOC103501967 [Cucumis melo]) HSP 1 Score: 262.7 bits (670), Expect = 2.0e-66 Identity = 137/152 (90.13%), Postives = 142/152 (93.42%), Query Frame = 0
BLAST of ClCG02G020590 vs. NCBI nr
Match: KAE8647064.1 (hypothetical protein Csa_023018 [Cucumis sativus]) HSP 1 Score: 259.2 bits (661), Expect = 2.2e-65 Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0
BLAST of ClCG02G020590 vs. ExPASy TrEMBL
Match: A0A5A7SXD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00590 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 3.9e-68 Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of ClCG02G020590 vs. ExPASy TrEMBL
Match: A0A0A0KET2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G302120 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67 Identity = 138/154 (89.61%), Postives = 142/154 (92.21%), Query Frame = 0
BLAST of ClCG02G020590 vs. ExPASy TrEMBL
Match: A0A1S3CKF0 (uncharacterized protein LOC103501967 OS=Cucumis melo OX=3656 GN=LOC103501967 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 9.7e-67 Identity = 137/152 (90.13%), Postives = 142/152 (93.42%), Query Frame = 0
BLAST of ClCG02G020590 vs. ExPASy TrEMBL
Match: A0A6J1G522 (uncharacterized protein LOC111450987 OS=Cucurbita moschata OX=3662 GN=LOC111450987 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.4e-60 Identity = 131/159 (82.39%), Postives = 139/159 (87.42%), Query Frame = 0
BLAST of ClCG02G020590 vs. ExPASy TrEMBL
Match: A0A6J1L3K0 (uncharacterized protein LOC111499579 OS=Cucurbita maxima OX=3661 GN=LOC111499579 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 8.8e-60 Identity = 131/160 (81.88%), Postives = 137/160 (85.62%), Query Frame = 0
BLAST of ClCG02G020590 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.9 bits (302), Expect = 8.8e-28 Identity = 77/160 (48.12%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of ClCG02G020590 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.0 bits (201), Expect = 4.5e-16 Identity = 61/155 (39.35%), Postives = 84/155 (54.19%), Query Frame = 0
BLAST of ClCG02G020590 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11 Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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