CaUC11G213400 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTGGTACAAATAACATATAGGGCAAACATTATGAATAACTAAATATTATAATATAAAAAAACAGCTAAAACTTTTAAAGAAGTCGCAATTTACTTTCTAAAATTTATTTGATAACGATTTAGTTATCATAATATTTTTTATTTTTTTAAAACATTTAGTGAGACTTTAATACATAGCAATGAGTGTCTGTATTGACTATCATGTTATAATGGAATTTAAGTATATTTTTTAGATGGTAGGAATTAATTGTTATAGAATTTAAAGTATGAAAACTACATTATTACATACTAAAGTTTAAGTACTAAATTATTACCAATTATAAAGTACATATATTAAATTATTACATGGGACCAAACATGTTTTTTAATTTAGGGAGCAAACATGTTTTTAACCTAAATACTATATACCGATATTCATTATTTTTTTTTATGAGAATACAACATTACAATTGTAGGGAGAAAGTTCAAACTTTTTACCTATGCCTAACTTAATTGAGTTATGTTTAGATATATATCATGGACAATATTGCATATTTTAAAACTATATTTTTAAAATCACAAGATAAATAATTAACATGAACTTACTTCAATGATTAATCACATCAACACAAATGCAAGTCAACCCCACAAGCTCTCAGATGTTTCAGTTCACTAAGTTTGAAAAGTCCAAAGAGCGCAGAACAGACGACATACTATTTAGTATGTGTGATAAATATATATATATATTTTCTAAAAAAACTAATTTTTTAGGCTTTATTTGATAACCATTTAGTTTTTGGTTTTTGTTTTTAAAAATTAAAGATGGTATTTTTATGAATTACTAATAAGAGGTCGGGTGAAAGAAGTGTACTTTACTAGCTATATTAGTTTAAAATGGTGTTTAATAACTTTAACCATTAGGGCAAATATTCAATTTAATTATATCATAAATTATGGAGTTGTATTAATTAAACCTCAAATTAATAATTGTTTAAACTTTAAATTTTCATAAGTGATTCAATTTAGACCTCATTTAATTGTAATTAAAGTCACGTCAGAATTACTTAAATAAAATTATTTTTTTCTAAAAATTCCACCAAAGAAGCAAGAAAAATTATCATGTAATTTTTTTCTAAACAAGTAAAAACAAAATAAAGGGAGATGAGTGGATGAAATATCGTTACTATCTATTTGATTATTGCATTTTTCTTTTAGTTTATATTACTTTTTACATTTAACTTAAGAAACTCCATTTATACACATGAAAAATTATGCAGGAATGGTTTTAAAAATAAAAAATTATAATAGAATGTCTAAATCGATTCACTTATAAAAATTTACTATTCAAATATGTACAATTAGTAGTTTAAAGTTTAATTGATAGAAATTTAGACGTAATAAATTGATATTTTCATGGTTATTATTAATCATATGAGACTTTTTTTTTCATTAGTAAGAAATTCTAAATTTAGAATAAATTGTCAATTACTTCAAATGAATCATTCTTGCCGTCCCCCTTGTCAATGGGCCTCGTTATAAAAGTTCCATTGACTTGATGACACATGGCATAGTGTTTCCTATGATTGCATTACACGTGTCAAGTGGGGATTTCATTCAAACTACTATATTAACACTAAACTTGAGGTTCTAAATCAAACAAACTTGAGAATCATATTCACATATCATTTTCAATTTTATATCTCTTTTTCTTTTCTAAATTTCTCTTTTTTAAAAAAAATGGATAACTCTCAAAAGATGAGCTATCACTCTGGAGAAGCCAAGGGCCAAGCTCAGGTTTTTCATCTATTGTCATTGTTTTTGTTATCATACATCACTTTAAAAGTATATGAAATTTTATAATTTATTACCATCACTGAAAAATTATCCAAATTTATTTTTTCGCATTTGATATTCAAAGAGTGATAGGTAACATGTCGGTTTGTGTTCTTATATAGGAAAAGGTGAGCAATATGATGGATAAGGCAGGCGATGCAGCTCAATCGGCCAAAGAGTCAATTCAAGAGGCAGGACAACAAATGAAAGCTAAGGCTCAAGGAGCTGCTGATGCTGTCAAAGATGCTGTCAACAAATGAAGCCACCCATCATCTTTATGTTTAATTAATTTTGCTTAAACACTCTCTTGGGAGAGCTATTTTCTTTATTAGCATGGGGTTTGTTTCCAACCCTTTCAAATCTCTTTATGGGAGAAAAGAGGTTTTTATTTTTCTTCTTTATATTATATATATTATGAGTTTTTCTTTTGGCTTTTGGG ATGGAATTGATGAGCTATCACTCTGGAGAAGCCAAGGGCCAAGCTCAGGAAAAGGTGAGCAATATGATGGATAAGGCAGGCGATGCAGCTCAATCGGCCAAAGAGTCAATTCAAGAGGCAGGACAACAAATGAAAGCTAAGGCTCAAGGAGCTGCTGATGCTGTCAAAGATGCTGTCAACAAATGAAGCCACCCATCATCTTTATGTTTAATTAATTTTGCTTAAACACTCTCTTGGGAGAGCTATTTTCTTTATTAGCATGGGGTTTGTTTCCAACCCTTTCAAATCTCTTTATGGGAGAAAAGAGGTTTTTATTTTTCTTCTTTATATTATATATATTATGAGTTTTTCTTTTGGCTTTTGGG ATGGAATTGATGAGCTATCACTCTGGAGAAGCCAAGGGCCAAGCTCAGGAAAAGGTGAGCAATATGATGGATAAGGCAGGCGATGCAGCTCAATCGGCCAAAGAGTCAATTCAAGAGGCAGGACAACAAATGAAAGCTAAGGCTCAAGGAGCTGCTGATGCTGTCAAAGATGCTGTCAACAAATGA MELMSYHSGEAKGQAQEKVSNMMDKAGDAAQSAKESIQEAGQQMKAKAQGAADAVKDAVNK Homology
BLAST of CaUC11G213400 vs. NCBI nr
Match: XP_038891124.1 (late embryogenesis abundant protein 7-like [Benincasa hispida]) HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17 Identity = 52/58 (89.66%), Postives = 56/58 (96.55%), Query Frame = 0
BLAST of CaUC11G213400 vs. NCBI nr
Match: XP_038891080.1 (late embryogenesis abundant protein 2-like [Benincasa hispida]) HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16 Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of CaUC11G213400 vs. NCBI nr
Match: XP_038891163.1 (stress-induced protein KIN2-like [Benincasa hispida]) HSP 1 Score: 95.1 bits (235), Expect = 2.2e-16 Identity = 52/58 (89.66%), Postives = 56/58 (96.55%), Query Frame = 0
BLAST of CaUC11G213400 vs. NCBI nr
Match: XP_004141485.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical protein Csa_008504 [Cucumis sativus]) HSP 1 Score: 94.0 bits (232), Expect = 4.9e-16 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of CaUC11G213400 vs. NCBI nr
Match: KAF3443960.1 (hypothetical protein FNV43_RR13650 [Rhamnella rubrinervis]) HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of CaUC11G213400 vs. ExPASy TrEMBL
Match: A0A0A0KXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.4e-16 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of CaUC11G213400 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.0e-16 Identity = 51/57 (89.47%), Postives = 53/57 (92.98%), Query Frame = 0
BLAST of CaUC11G213400 vs. ExPASy TrEMBL
Match: A0A5D3BPC0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002090 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15 Identity = 50/58 (86.21%), Postives = 53/58 (91.38%), Query Frame = 0
BLAST of CaUC11G213400 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of CaUC11G213400 vs. ExPASy TrEMBL
Match: A0A6J1BXE6 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111006564 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15 Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0
BLAST of CaUC11G213400 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 70.1 bits (170), Expect = 7.0e-13 Identity = 36/54 (66.67%), Postives = 48/54 (88.89%), Query Frame = 0
BLAST of CaUC11G213400 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 67.0 bits (162), Expect = 5.9e-12 Identity = 36/55 (65.45%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of CaUC11G213400 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 64.3 bits (155), Expect = 3.9e-11 Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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