CaUC09G173370 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCCTCGCATATGGGTAACAAGAAGGCGTTTATGCCCCAACGGTGGGGCCTTATGGGGAAGGGCCCAATCCAATACAGACAGCACACCCCCCATTTCAAGCGCACCTCTGTATCGACTGAATCACTCTTTAAGTCTAGTTGGTGGAACTGGTAAACCATGCGAGTAAGTTAGATGCGTGGGGTAGAGGGCTCGTAATACCCCCATTTTCCTATTCCAGCCTTTTTTTCGCGTCAGTAGTGAATCACCTACTCAAAAAAGAGGCTGGCTTGCACGCCCTATTTGAGACTACTAAGGCAGGCGGTGGACTCTTTCATTAGGGAAGGGAAGAAGGAGCCTAAGCACGGCAGATGCCATACACTTGAGTGGCAAAGGAAAGCAAGATCATACATCTTTTTCCAGGCCTGTTCGAACATAAGGTTCCCGGGGAAGATCAAGTTGGTGAGTCGTGTGATGGGAAACCTTTCCGCACGGTTCGGAAAGCATTGAATGAGAATGAGAGGTTCACCACCGCATCATTGTAGGCAAGGGGAGCTCGCTCGATTTGCAAAAGGGTCCGACTAATAATTCACTTCTGACTCGTTGTTCGATAGCCCGACCATAGTGATGTTAATTGTGGTTACATCCATAAGTAGCTTGGTCCATCTTTATTCCATTTCATATATGTCCGAGGATCCGCATAGCCCTCGATTTATGTGTTATTTATCCATTTTTACTTTTTTTATGCCAATGTTGTTGACTGGATATAACTCTCTTCAATTATTCCTGGGATGGGAGGGAGTAGGCCTTGTTTCATATTTATTAATTCATTTATGGTTTACATGACTTCAGGCAGATAAAGCAGCTATAAGAGCTATGCATATCAATTGATTAGGTGATTTTGGATTAGCTCCTAGGATTTCGGGTCGTTTTACTCTCTTTCAAACAGCAGACTTTTCCACCATTTTTGCTCATGACAGTGCCCCCAGAAATTCTTGGATTTCTTGCAATATGAGATTGAATGCCATAACTCTGATTTGTATTTTACTTCTTATTGGTGCTATTGGGAAATCCACACAGATAGGATCGCATACTTGGTCACCCGATACTATGGAGAGTCCTACTCTAGTATCCGCTTTGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGGTGCCCCCCTTTATTTGAATACCCATTTACGGCTTTGATTGTTATTACTTCTGCAGGAGCTACTGCTTGCAGCAACCACGGGAATATTATAAAACGAACTAAAGAGGGTCATAGCTTATTTAACTTGCAGTCAATTAGGCTATATGATCTTTGTTTGTGGCATCTCTAACTATTCGGTTAGTGTCTTTCACTTAATGAATCATGCATTTTTAAAAGCATTACTATTCTTAAGTGCAAGTTCGGTGATTCATGCCATGTTGGAGCAGGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTATACAAATGGAACTTAACCATACATGTCCCCCAACCATATCTTCTGTTAGATAA ATGGTGCCTCGCATATGGGTAACAAGAAGGCGTTTATGCCCCAACGGTGGGGCCTTATGGGGAAGGGCCCAATCCAATACAGACAGCACACCCCCCATTTCAAGCGCACCTCTGTATCGACTGAATCACTCTTTAAGTCTAGTTGGTGGAACTGGTAAACCATGCGAGGAAGGGAAGAAGGAGCCTAAGCACGGCAGATGCCATACACTTGAGTGGCAAAGGAAAGCAAGATCATACATCTTTTTCCAGGCCTGTTCGAACATAAGGTTCCCGGGGAAGATCAAGTTGATAGGATCGCATACTTGGTCACCCGATACTATGGAGAGTCCTACTCTAGTATCCGCTTTGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGTCAATTAGGCTATATGATCTTTGTTTGTGGCATCTCTAACTATTCGGTTAGTGTCTTTCACTTAATGAATCATGCATTTTTAAAAGCATTACTATTCTTAAGTGCAAGTTCGGTGATTCATGCCATGTTGGAGCAGGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTATACAAATGGAACTTAACCATACATGTCCCCCAACCATATCTTCTGTTAGATAA ATGGTGCCTCGCATATGGGTAACAAGAAGGCGTTTATGCCCCAACGGTGGGGCCTTATGGGGAAGGGCCCAATCCAATACAGACAGCACACCCCCCATTTCAAGCGCACCTCTGTATCGACTGAATCACTCTTTAAGTCTAGTTGGTGGAACTGGTAAACCATGCGAGGAAGGGAAGAAGGAGCCTAAGCACGGCAGATGCCATACACTTGAGTGGCAAAGGAAAGCAAGATCATACATCTTTTTCCAGGCCTGTTCGAACATAAGGTTCCCGGGGAAGATCAAGTTGATAGGATCGCATACTTGGTCACCCGATACTATGGAGAGTCCTACTCTAGTATCCGCTTTGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGTCAATTAGGCTATATGATCTTTGTTTGTGGCATCTCTAACTATTCGGTTAGTGTCTTTCACTTAATGAATCATGCATTTTTAAAAGCATTACTATTCTTAAGTGCAAGTTCGGTGATTCATGCCATGTTGGAGCAGGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTATACAAATGGAACTTAACCATACATGTCCCCCAACCATATCTTCTGTTAGATAA MVPRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCEEGKKEPKHGRCHTLEWQRKARSYIFFQACSNIRFPGKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIASQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFLSASSVIHAMLEQANGLVKICQIPPSIQMELNHTCPPTISSVR Homology
BLAST of CaUC09G173370 vs. NCBI nr
Match: YP_009526581.1 (NADH dehydrogenase subunit 5 [Ammopiptanthus mongolicus] >AXV54340.1 NADH dehydrogenase subunit 5 [Ammopiptanthus mongolicus]) HSP 1 Score: 233.8 bits (595), Expect = 1.3e-57 Identity = 146/316 (46.20%), Postives = 153/316 (48.42%), Query Frame = 0
BLAST of CaUC09G173370 vs. NCBI nr
Match: KAB8477461.1 (hypothetical protein FH972_025327 [Carpinus fangiana]) HSP 1 Score: 227.6 bits (579), Expect = 9.6e-56 Identity = 144/316 (45.57%), Postives = 151/316 (47.78%), Query Frame = 0
BLAST of CaUC09G173370 vs. NCBI nr
Match: KJB09767.1 (hypothetical protein B456_001G163400 [Gossypium raimondii]) HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48 Identity = 144/377 (38.20%), Postives = 151/377 (40.05%), Query Frame = 0
BLAST of CaUC09G173370 vs. NCBI nr
Match: GER38147.1 (NADH-ubiquinone oxidoreductase chain 5 [Striga asiatica]) HSP 1 Score: 189.1 bits (479), Expect = 3.8e-44 Identity = 125/261 (47.89%), Postives = 133/261 (50.96%), Query Frame = 0
BLAST of CaUC09G173370 vs. NCBI nr
Match: KAF3617182.1 (NADH-ubiquinone oxidoreductase chain 5 [Capsicum annuum]) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-41 Identity = 122/259 (47.10%), Postives = 131/259 (50.58%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: P29388 (NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE=1 SV=3) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22 Identity = 67/132 (50.76%), Postives = 70/132 (53.03%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: P10330 (NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE=2 SV=2) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22 Identity = 67/132 (50.76%), Postives = 70/132 (53.03%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: Q37680 (NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22 Identity = 67/132 (50.76%), Postives = 70/132 (53.03%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: P26849 (NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 PE=3 SV=2) HSP 1 Score: 105.1 bits (261), Expect = 9.4e-22 Identity = 66/132 (50.00%), Postives = 69/132 (52.27%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: Q37372 (NADH-ubiquinone oxidoreductase chain 5 OS=Acanthamoeba castellanii OX=5755 GN=ND5 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 5.7e-19 Identity = 59/144 (40.97%), Postives = 71/144 (49.31%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A385G2B9 (NADH dehydrogenase subunit 5 OS=Ammopiptanthus mongolicus OX=126911 GN=nad5 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 6.5e-58 Identity = 146/316 (46.20%), Postives = 153/316 (48.42%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A5N6L1B2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025327 PE=3 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 4.6e-56 Identity = 144/316 (45.57%), Postives = 151/316 (47.78%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A0D2LZE3 (Proton_antipo_M domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_001G163400 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 5.5e-49 Identity = 144/377 (38.20%), Postives = 151/377 (40.05%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A5A7Q196 (NADH-ubiquinone oxidoreductase chain 5 OS=Striga asiatica OX=4170 GN=STAS_14607 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44 Identity = 125/261 (47.89%), Postives = 133/261 (50.96%), Query Frame = 0
BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A2N9G584 (Proton_antipo_M domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22604 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44 Identity = 125/259 (48.26%), Postives = 134/259 (51.74%), Query Frame = 0
BLAST of CaUC09G173370 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C ) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24 Identity = 68/132 (51.52%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of CaUC09G173370 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A ) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24 Identity = 68/132 (51.52%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of CaUC09G173370 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B ) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24 Identity = 68/132 (51.52%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of CaUC09G173370 vs. TAIR 10
Match: ATCG01010.1 (NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein ) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12 Identity = 47/144 (32.64%), Postives = 63/144 (43.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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