CaUC05G099740 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAACATCACAAAGTAGACATAAAAGGTACACTAATGTGAGACGACGAGACCTAGAGTTCGTGGTGGGGGATAAAGTGTTCCCGAAAGTGGCACATATGAAAGGTGTTCTGAGGTTTGCAAGGAAAGGGAAGTTAAGTCTATGTTTCTTTGGGCCATTTGAGATCCTAGAGCGGATTGCCCTTGTGGCTTATCAGTTGGCGTTGGCGTCGTCTCTTTCTGCAAATCCATCCCATATAGTAGACTATGAGCCCTTGCAATTAAATGATAACCTGAGTTATAAGGAGAAGCCTATTCAAATTCTAGCAAGGGAAGTAAAGACTTTACATAATGAGAGATAA ATGCAAACATCACAAAGTAGACATAAAAGGTACACTAATGTGAGACGACGAGACCTAGAGTTCGTGGTGGGGGATAAAGTGTTCCCGAAAGTGGCACATATGAAAGGTGTTCTGAGGTTTGCAAGGAAAGGGAAGTTAAGTCTATGTTTCTTTGGGCCATTTGAGATCCTAGAGCGGATTGCCCTTGTGGCTTATCAGTTGGCGTTGGCGTCGTCTCTTTCTGCAAATCCATCCCATATAGTAGACTATGAGCCCTTGCAATTAAATGATAACCTGAGTTATAAGGAGAAGCCTATTCAAATTCTAGCAAGGGAAGTAAAGACTTTACATAATGAGAGATAA ATGCAAACATCACAAAGTAGACATAAAAGGTACACTAATGTGAGACGACGAGACCTAGAGTTCGTGGTGGGGGATAAAGTGTTCCCGAAAGTGGCACATATGAAAGGTGTTCTGAGGTTTGCAAGGAAAGGGAAGTTAAGTCTATGTTTCTTTGGGCCATTTGAGATCCTAGAGCGGATTGCCCTTGTGGCTTATCAGTTGGCGTTGGCGTCGTCTCTTTCTGCAAATCCATCCCATATAGTAGACTATGAGCCCTTGCAATTAAATGATAACCTGAGTTATAAGGAGAAGCCTATTCAAATTCTAGCAAGGGAAGTAAAGACTTTACATAATGAGAGATAA MQTSQSRHKRYTNVRRRDLEFVVGDKVFPKVAHMKGVLRFARKGKLSLCFFGPFEILERIALVAYQLALASSLSANPSHIVDYEPLQLNDNLSYKEKPIQILAREVKTLHNER Homology
BLAST of CaUC05G099740 vs. NCBI nr
Match: KAA0061323.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 1.4e-32 Identity = 78/127 (61.42%), Postives = 95/127 (74.80%), Query Frame = 0
BLAST of CaUC05G099740 vs. NCBI nr
Match: KAA0033251.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 1.4e-32 Identity = 77/127 (60.63%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of CaUC05G099740 vs. NCBI nr
Match: KAA0062171.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 149.4 bits (376), Expect = 1.8e-32 Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 0
BLAST of CaUC05G099740 vs. NCBI nr
Match: KAA0031852.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 149.4 bits (376), Expect = 1.8e-32 Identity = 79/127 (62.20%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of CaUC05G099740 vs. NCBI nr
Match: KAA0035523.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 148.7 bits (374), Expect = 3.1e-32 Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 0
BLAST of CaUC05G099740 vs. ExPASy TrEMBL
Match: A0A5A7SUW2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00470 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 6.7e-33 Identity = 77/127 (60.63%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of CaUC05G099740 vs. ExPASy TrEMBL
Match: A0A5A7UZD7 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18953G00010 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 6.7e-33 Identity = 78/127 (61.42%), Postives = 95/127 (74.80%), Query Frame = 0
BLAST of CaUC05G099740 vs. ExPASy TrEMBL
Match: A0A5A7SL88 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold28703G00010 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 8.8e-33 Identity = 79/127 (62.20%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of CaUC05G099740 vs. ExPASy TrEMBL
Match: A0A5A7V905 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005490 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 8.8e-33 Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 0
BLAST of CaUC05G099740 vs. ExPASy TrEMBL
Match: A0A5A7SY75 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001800 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.5e-32 Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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