CaUC07G133970 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G133970
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr07: 23782946 .. 23783335 (-)
RNA-Seq Expression	CaUC07G133970
Synteny	CaUC07G133970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGTCTCCGCCGATTCTTCTTCTTCTTCCTCCCGCTCCTCTTCATTTCTAGAATGCGCCATTCCGACGAGTCCGAGCGTTCAACTCGTTTCTAAATCGGTGTCGGATCGGCTTCTTGGCAAGTTCTTCGACGCCTCAAAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGACGAGTGTTTCTGGATTCTCCGGCCGATGTTTGCTCCGGTTACGAGGTTCTCTCGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGTTTCACAGTAAGTTCTCTCTCATCATCGCATTGTGATTTACGCAGTGATTGCTTTGTTTCGTTTTCTTGTTTTCGAAATAGATTCGGTGTAATGTGA

mRNA sequence

ATGCCAGTCTCCGCCGATTCTTCTTCTTCTTCCTCCCGCTCCTCTTCATTTCTAGAATGCGCCATTCCGACGAGTCCGAGCGTTCAACTCGTTTCTAAATCGGTGTCGGATCGGCTTCTTGGCAAGTTCTTCGACGCCTCAAAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGACGAGTGTTTCTGGATTCTCCGGCCGATGTTTGCTCCGGTTACGAGGTTCTCTCGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGTTTCACAGTAAGTTCTCTCTCATCATCGCATTGTGATTTACGCAGTGATTGCTTTGTTTCGTTTTCTTGTTTTCGAAATAGATTCGGTGTAATGTGA

Coding sequence (CDS)

ATGCCAGTCTCCGCCGATTCTTCTTCTTCTTCCTCCCGCTCCTCTTCATTTCTAGAATGCGCCATTCCGACGAGTCCGAGCGTTCAACTCGTTTCTAAATCGGTGTCGGATCGGCTTCTTGGCAAGTTCTTCGACGCCTCAAAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGACGAGTGTTTCTGGATTCTCCGGCCGATGTTTGCTCCGGTTACGAGGTTCTCTCGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGTTTCACAGTAAGTTCTCTCTCATCATCGCATTGTGATTTACGCAGTGATTGCTTTGTTTCGTTTTCTTGTTTTCGAAATAGATTCGGTGTAATGTGA

Protein sequence

MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICFTVSSLSSSHCDLRSDCFVSFSCFRNRFGVM

Homology

[Close]

BLAST of CaUC07G133970 vs. NCBI nr
Match: XP_022142869.1 (uncharacterized protein LOC111012878 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41
Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
           MP+SA SSSSSS SSSFLEC  PTSPSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWS
Sbjct: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF 100
           PPIPRRVFLDSPA+VCSGYEV SKLD+AKKAWRKF+ICF
Sbjct: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICF 99

[Close]

BLAST of CaUC07G133970 vs. NCBI nr
Match: XP_038876207.1 (uncharacterized protein LOC120068490 isoform X1 [Benincasa hispida])

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41
Identity = 92/108 (85.19%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 1   MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
           MP+SADSSSSSS S+SFLECA PTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS
Sbjct: 1   MPISADSSSSSSCSASFLECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICFTVSSLSSSH 109
           PPI R+VFLDSPADVCSGY VLSKLD A+KAWRKFIICF+    S +H
Sbjct: 61  PPIQRKVFLDSPADVCSGYVVLSKLDYARKAWRKFIICFSGFWCSLNH 108

[Close]

BLAST of CaUC07G133970 vs. NCBI nr
Match: XP_038876217.1 (uncharacterized protein LOC120068490 isoform X2 [Benincasa hispida])

HSP 1 Score: 179.5 bits (454), Expect = 1.9e-41
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
           MP+SADSSSSSS S+SFLECA PTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS
Sbjct: 1   MPISADSSSSSSCSASFLECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICFT 101
           PPI R+VFLDSPADVCSGY VLSKLD A+KAWRKFIICF+
Sbjct: 61  PPIQRKVFLDSPADVCSGYVVLSKLDYARKAWRKFIICFS 100

[Close]

BLAST of CaUC07G133970 vs. NCBI nr
Match: KAG7015053.1 (hypothetical protein SDJN02_22686, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.9 bits (437), Expect = 1.7e-39
Identity = 92/112 (82.14%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 1   MPVSAD-----SSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQ 60
           MP SAD     SSSSSS SSSFL+CA P S SVQLVSK  SDRLLGKFFDASKFDFDYEQ
Sbjct: 1   MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQ 60

Query: 61  SSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICFTVSSLSSS 108
           SSLWSPPIPRRVFLDSPADVCSGYEVLSKL+NAKKAWRK I CF VS+L+ S
Sbjct: 61  SSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCFGVSALTIS 112

[Close]

BLAST of CaUC07G133970 vs. NCBI nr
Match: XP_022984340.1 (uncharacterized protein LOC111482673 isoform X1 [Cucurbita maxima])

HSP 1 Score: 170.2 bits (430), Expect = 1.1e-38
Identity = 86/99 (86.87%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
           MP SADSSSSSS SSSFL+CA P S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWS
Sbjct: 1   MPTSADSSSSSSSSSSFLDCATPRSLSVQLVSKSASDRLLDKFFDASKFNFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF 100
           PPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI CF
Sbjct: 61  PPIPRRVFLDSPDDVCSGYEVLSKLENVKKAWRKFITCF 99

[Close]

BLAST of CaUC07G133970 vs. ExPASy TrEMBL
Match: A0A6J1CMP9 (uncharacterized protein LOC111012878 OS=Momordica charantia OX=3673 GN=LOC111012878 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.3e-42
Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
           MP+SA SSSSSS SSSFLEC  PTSPSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWS
Sbjct: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF 100
           PPIPRRVFLDSPA+VCSGYEV SKLD+AKKAWRKF+ICF
Sbjct: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICF 99

[Close]

BLAST of CaUC07G133970 vs. ExPASy TrEMBL
Match: A0A6J1J8D3 (uncharacterized protein LOC111482673 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482673 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.5e-39
Identity = 86/99 (86.87%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
           MP SADSSSSSS SSSFL+CA P S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWS
Sbjct: 1   MPTSADSSSSSSSSSSFLDCATPRSLSVQLVSKSASDRLLDKFFDASKFNFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF 100
           PPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI CF
Sbjct: 61  PPIPRRVFLDSPDDVCSGYEVLSKLENVKKAWRKFITCF 99

[Close]

BLAST of CaUC07G133970 vs. ExPASy TrEMBL
Match: A0A6J1J4Z5 (uncharacterized protein LOC111482673 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482673 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.5e-39
Identity = 86/99 (86.87%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
           MP SADSSSSSS SSSFL+CA P S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWS
Sbjct: 1   MPTSADSSSSSSSSSSFLDCATPRSLSVQLVSKSASDRLLDKFFDASKFNFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF 100
           PPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI CF
Sbjct: 61  PPIPRRVFLDSPDDVCSGYEVLSKLENVKKAWRKFITCF 99

[Close]

BLAST of CaUC07G133970 vs. ExPASy TrEMBL
Match: A0A6J1EYJ9 (uncharacterized protein LOC111437603 OS=Cucurbita moschata OX=3662 GN=LOC111437603 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38
Identity = 88/104 (84.62%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MPVSAD-----SSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQ 60
           MP SAD     SSSSSS SSSFL+CA P S SVQLVSK  SDRLLGKFFDASKFDFDYEQ
Sbjct: 1   MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQ 60

Query: 61  SSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF 100
           SSLWSPPIPRRVFLDSPADVCSGYEVLSKL+NAKKAWRK I CF
Sbjct: 61  SSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCF 104

[Close]

BLAST of CaUC07G133970 vs. ExPASy TrEMBL
Match: A0A6J1J7J0 (uncharacterized protein LOC111482071 OS=Cucurbita maxima OX=3661 GN=LOC111482071 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.8e-37
Identity = 82/99 (82.83%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MPVSADSSSSSSRSSSFLECAIPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
           MP+S +SS+ S  SS F+ECA PT PSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWS
Sbjct: 1   MPISTESSTPS--SSCFIECATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIICF 100
           PPIPRRVFLDSP DVCSGYEVLSKL+ AK AWRKF+ICF
Sbjct: 61  PPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICF 97

[Close]

BLAST of CaUC07G133970 vs. TAIR 10
Match: AT4G15140.1 (unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 8.7e-05
Identity = 26/57 (45.61%), Postives = 32/57 (56.14%), Query Frame = 0


Query: 24 TSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVF----LDSPADVC 77
          T+  V+ +   +   LL KF D S F FDY QSSLWSP +PR       LDS + VC
Sbjct: 21 TTKVVEYLQPVMCRELLCKFPDNSAFGFDYSQSSLWSPLLPRNYASPSDLDSDSCVC 77

The following BLAST results are available for this feature:

BLAST of CaUC07G133970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142869.1	1.1e-41	89.90	uncharacterized protein LOC111012878 [Momordica charantia]	[more]
XP_038876207.1	1.4e-41	85.19	uncharacterized protein LOC120068490 isoform X1 [Benincasa hispida]	[more]
XP_038876217.1	1.9e-41	90.00	uncharacterized protein LOC120068490 isoform X2 [Benincasa hispida]	[more]
KAG7015053.1	1.7e-39	82.14	hypothetical protein SDJN02_22686, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022984340.1	1.1e-38	86.87	uncharacterized protein LOC111482673 isoform X1 [Cucurbita maxima]	[more]

BLAST of CaUC07G133970 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC07G133970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMP9	5.3e-42	89.90	uncharacterized protein LOC111012878 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1J8D3	5.5e-39	86.87	uncharacterized protein LOC111482673 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J4Z5	5.5e-39	86.87	uncharacterized protein LOC111482673 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EYJ9	2.7e-38	84.62	uncharacterized protein LOC111437603 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]
A0A6J1J7J0	1.8e-37	82.83	uncharacterized protein LOC111482071 OS=Cucurbita maxima OX=3661 GN=LOC111482071...	[more]

BLAST of CaUC07G133970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15140.1	8.7e-05	45.61	unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34287	OS06G0551500 PROTEIN-RELATED	coord: 4..101
None	No IPR available	PANTHER	PTHR34287:SF12	SUBFAMILY NOT NAMED	coord: 4..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G133970.1	CaUC07G133970.1	mRNA