Sed0012828 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTTGTTTGCAATAAGCTGATAAGTGGTGGTTACGTTCGTAGTGGAGGGGTAATACTCTTTTTACTTTCCTCTCTTTATTTTGTATTATGATTTTTTAAAGCTTTCTTATTGTTTAAATGAATATTTGTTCATAAATTTGGATTTGTATAAAACAACTAAAGACCGATTACTTTATTGTGTCTATTGTTTTGCCTGTAGATAATGGTGTGTCATAATCACATGGTTATTCAAAATGAGGTTAACCAAGATGTAATACATGAACTTATCCATGCTTTTGATGATTGTCGTGTTGGTGTGGCAATCTTTGGTTTGGCTAACTGTGTTCATCATTCTAGCAATGAAGTATGCATTTGAAAAAATTTAGATTAGTGTTGGACATCTAAGTGGTGATCGTCACTATAAATGAGAACTACTGAGAGATTTTGTCAAATTATATGACCATGAGAAAGTATGATTTGGAAGTACTTGCTATTTGTTTGTCAATCTTTTTTAGAAGAATTGTTAGAAAGAACTTGTAAATACTGTTTCTCCTTTGTTTACACACTTATGGAATATATCTTTGATTGGTTATTCATTTTTTTATAATTATTTTTAGTTTTAGATTTCTGCTGAATGTATCAAGAAGTCTTCTTATAGTAAGAAATTAGCTGGCATGGGAGGAATTGTGCAATTTTGGCCAGATAAATTATAAATGATGCGACAGTAGTCCATTCTAGAGGTTTAAAAAAATAGCTTGGATATGAGTGTATTTTTCTTTATACTCCATATCCTATCCTTGGTTTATTTATTGATTAAAATACCATTTTGGTCCCTAGACTATCATCTTTATTCCATTTTTATCCATAAACTTTCAAATGTCTAATTTTAGTCTCTTAACTATGATTTTTGTTCCGTTTTTGTCCCTCAACTTTCAAAAGTCCAATTTTAGCCCCTTAACTTTGATTTTTTTTTTTCCCATTTTAGTCCCTCACATCTACAAACCGTTAGTTTTCTATTTCGAAAAAAAAAAATCTCCTCAACTCAAGAAGAAGATTGAGCTTGGAGTTGATGAGATTTGATTTTACGCTGTTTTTCTGGTAATGAACAGGGAGGAAAATAGATGAAAAAAAAAACCAAAAATGAGATAGAGATAGCCAAGGAGTTTAAAGTAGAAGTTGAAGAAATTGGACAAGTCAAACATAAAAACATAGTTAGATTGTTAGGATATTGTGTTGAAGGTGCTATGATTTTTGCCCAAATACGTTTGATGCCTTTTCTATTTCAGCTTGCCTATAATTCTAAAGATGAGACTTTATTTTATTATTTTCATGTTTGGTTGCATTTTTAGTTGAGTTAATATTCTACTTCTAAAGGTTCTTGTGGTTCAAGTGATTAATTATTGGCAAATTCAAAGGTTTGGGAATTTGGAAGCAGGCATGGACCACGGTATTTGTATAAAATATTTTCCTAACACTTTCTTGCACATTGAATCTATTAACATATTTTCCATAATTTCCGCCATGAAGTTACTGAGATTTTTAGTTCTCAAATGAGAAATTTTCAACTGCCATGCAAATAAAGAGATTGATTTACTCAAAAGGCAAACACATTTTCTATGCAACTTATTCAGTTTCAAGTTTTTTTACACCATAACAATTTTCATCTATAAGTTCTCGAAAGAGATAGCCAATTCATTCAGCATAAAGAAATTACTTATGTTAGAATAAGATGGTGATGATAACCTTTCTTACTCTCGCCTAAGAGTGAGAATGAGAAATTATTGAAATTTCAAATTGAAACTTGAATGATATCACTTTTCAGGTACAACATCTGAGTTATCACAATTACAAAGTCAAGTAATTACGACTCTAGAACATGGATTAGTTCTTCTTAGAGGTAAGAATTCTTCGACTTGCATTGATGTCATGGATTAGTTCTTCTTAGAGGTAATTACGACATATTCTTTTTTTTAGTTTGAATTATAAGCATGAAGGTAGAGTTTTACTCTTCTCATGAATTGTTTCATTATATTGCTTTTTTTTTCCCTTTAAAATCTCCACATTTTTCTATAGTTAGTTATGGTAGATTTACATTTGTAATTTACTTTTTTTAGTTTTATTGTTATGAAACTTGATCCTTCTTGTAGCACTATTGGTGAGATAAGTAGATTTATTTAAATTTCTCTGTTTCTCTAAGGTCATTTATACTTTATTGAGTTTGTTTTGCTAATTTGGGGAACATTGAAACTTGGTTGGAGATTGCATGTCATTGTATTAACTTTAAAGCCTGTCTATCATTTGGGAAAGGGAACTTCACTTGTCTCCCTCTCTAAACAAGAGTCGTTGAATTAAAAAAAAAAATTGTTTCACCTTTTGAACTTAAAATAAGTCTTTTTTTATGGAAAGTTTTTTCCTTATTCTTTTCTCATGTTTTCATACTTGTTTCAATTCCTTTCTATCCTCTAATTCACGAGCCTTTGACAGAGTTCAATATATCAAGTGGAGTTTACCATGAAAAGAAGTCATAATAAACCTTCAAAGGTAATACCCATTAAATTTGTTGCTCCTTAGTCTATTTCAAGTAATTTCCTTTTTATCTTGAATCTTTTATATTAAATGGTTCATTGGATCTTAAAGGAAGACGAAGAACTTTTGTAAGCTGAATGCTTCTCTCTTATTGAGTTATTTTCGAGCATCATAATGGATAGAATTTTCAATCTGAAAGGTATGAAAATCTAA ATGGTTGTTGTTTGCAATAAGCTGATAAGTGGTGGTTACGTTCGTAGTGGAGGGATAATGGTGTGTCATAATCACATGGTTATTCAAAATGAGGTTAACCAAGATGTAATACATGAACTTATCCATGCTTTTGATGATTGTCGTGTTGGTGTGGCAATCTTTGGTTTGGCTAACTGTGTTCATCATTCTAGCAATGAAATTTCTGCTGAATGTATCAAGAAGTCTTCTTATAGTAAGAAATTAGCTGGCATGGGAGGAATTGTTCTTGTGGTTCAAGTGATTAATTATTGGCAAATTCAAAGGTTTGGGAATTTGGAAGCAGGCATGGACCACGGTACAACATCTGAGTTATCACAATTACAAAGTCAAGTAATTACGACTCTAGAACATGGATTAGTTCTTCTTAGAGGTATGAAAATCTAA ATGGTTGTTGTTTGCAATAAGCTGATAAGTGGTGGTTACGTTCGTAGTGGAGGGATAATGGTGTGTCATAATCACATGGTTATTCAAAATGAGGTTAACCAAGATGTAATACATGAACTTATCCATGCTTTTGATGATTGTCGTGTTGGTGTGGCAATCTTTGGTTTGGCTAACTGTGTTCATCATTCTAGCAATGAAATTTCTGCTGAATGTATCAAGAAGTCTTCTTATAGTAAGAAATTAGCTGGCATGGGAGGAATTGTTCTTGTGGTTCAAGTGATTAATTATTGGCAAATTCAAAGGTTTGGGAATTTGGAAGCAGGCATGGACCACGGTACAACATCTGAGTTATCACAATTACAAAGTCAAGTAATTACGACTCTAGAACATGGATTAGTTCTTCTTAGAGGTATGAAAATCTAA MVVVCNKLISGGYVRSGGIMVCHNHMVIQNEVNQDVIHELIHAFDDCRVGVAIFGLANCVHHSSNEISAECIKKSSYSKKLAGMGGIVLVVQVINYWQIQRFGNLEAGMDHGTTSELSQLQSQVITTLEHGLVLLRGMKI Homology
BLAST of Sed0012828 vs. NCBI nr
Match: KAF3967043.1 (hypothetical protein CMV_008911 [Castanea mollissima]) HSP 1 Score: 91.7 bits (226), Expect = 5.6e-15 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0012828 vs. NCBI nr
Match: XP_023880445.1 (mitochondrial inner membrane protease ATP23 homolog [Quercus suber] >XP_023895128.1 mitochondrial inner membrane protease ATP23 homolog [Quercus suber]) HSP 1 Score: 91.7 bits (226), Expect = 5.6e-15 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0012828 vs. NCBI nr
Match: KAE8021417.1 (hypothetical protein FH972_007310 [Carpinus fangiana]) HSP 1 Score: 91.3 bits (225), Expect = 7.2e-15 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0012828 vs. NCBI nr
Match: XP_022922282.1 (mitochondrial inner membrane protease ATP23 [Cucurbita moschata] >XP_022990978.1 mitochondrial inner membrane protease ATP23 [Cucurbita maxima] >XP_023526059.1 mitochondrial inner membrane protease ATP23 [Cucurbita pepo subsp. pepo] >KAG6602399.1 hypothetical protein SDJN03_07632, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033074.1 ATP23 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-14 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0012828 vs. NCBI nr
Match: XP_038890541.1 (mitochondrial inner membrane protease ATP23 [Benincasa hispida]) HSP 1 Score: 90.1 bits (222), Expect = 1.6e-14 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0012828 vs. ExPASy Swiss-Prot
Match: Q9Y6H3 (Mitochondrial inner membrane protease ATP23 homolog OS=Homo sapiens OX=9606 GN=ATP23 PE=1 SV=3) HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04 Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Sed0012828 vs. ExPASy Swiss-Prot
Match: Q7T0P7 (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis OX=8355 GN=atp23 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04 Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0
BLAST of Sed0012828 vs. ExPASy Swiss-Prot
Match: Q5BKJ4 (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus tropicalis OX=8364 GN=atp23 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04 Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0
BLAST of Sed0012828 vs. ExPASy Swiss-Prot
Match: A4IGF3 (Mitochondrial inner membrane protease ATP23 homolog OS=Danio rerio OX=7955 GN=atp23 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.7e-04 Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0
BLAST of Sed0012828 vs. ExPASy TrEMBL
Match: A0A5N6QV09 (Mitochondrial inner membrane protease ATP23 OS=Carpinus fangiana OX=176857 GN=FH972_007310 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.5e-15 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0012828 vs. ExPASy TrEMBL
Match: A0A6J1JUV4 (Mitochondrial inner membrane protease ATP23 OS=Cucurbita maxima OX=3661 GN=LOC111487709 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 6.0e-15 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0012828 vs. ExPASy TrEMBL
Match: A0A6J1E2T7 (Mitochondrial inner membrane protease ATP23 OS=Cucurbita moschata OX=3662 GN=LOC111430307 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 6.0e-15 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0012828 vs. ExPASy TrEMBL
Match: A0A5C7HCC0 (Mitochondrial inner membrane protease ATP23 OS=Acer yangbiense OX=1000413 GN=EZV62_020019 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 7.8e-15 Identity = 45/76 (59.21%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of Sed0012828 vs. ExPASy TrEMBL
Match: A0A6J1BVA8 (Mitochondrial inner membrane protease ATP23 OS=Momordica charantia OX=3673 GN=LOC111006067 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 7.8e-15 Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Sed0012828 vs. TAIR 10
Match: AT3G03420.1 (Ku70-binding family protein ) HSP 1 Score: 74.3 bits (181), Expect = 8.5e-14 Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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