CaUC04G067840 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTGCCATTGACGCTCTATGTGCCGCCGATTCGAAGCCTCAGTCTGTTCGTTGAAACCCTAGAAGATCTTCTCCGTCACACCGCCATTCATACGCTCAGAGTTTATCCTCGCTTCCGCGTTGCCTTCTCTCGCCTGTTCGCCTCTGTATTCCGCGTTTCTTATTCCAGGTAGATCCGATTCGATTCTTCTTCAAGTTGGTTTCGCTGCTACTGCTGGTGCTGTTGTTTGATTTTGGAGATTCGATCGATTCGTGTTGTTTTGATTTTGTGCTTAGGAATCTTGAATATTGAATGTTGAATCTCGCTTCGCTGTTGTACATGGAAGTGATATTTTGGTTTGGAATCATTGGTGATGATGGATTTTTGTTTCATTTCGTTCTTCTCCGATCTGTTCACAGCTTTGGATTGTTTAGATTCTCTTCTTTTGTTCTTCCTTTTTCTTGTAATTAGGTAATCAGGACGCAATATGTTGAGAAGATTTATAAAATGGATTCAATTTTGTGAATACTCGCTCCGTTAACTCTGGCTTTTCAGCCTTCACCAAACGCGGAAGAGGCAAGAACATGGTACCCTCTACGCTCTGTCGCTCTCTACCTTTCAACTTTTTTTCTTCTTCTTTGAAAAACACAAAAAAGGTCAAATCATTTTTTCTTCATAATTGTTCTGCACATTATAAAATACTAATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTANAAGAACCCTAAGAGATTTAGAACACTAGTTCATGCAATCTCATCTTCTATTTGAAAAGGGAGTTGCGTGTGGAGATTATTAGGTTCGAAAGCAAATCAAAGTTACTCCCAAAGAGATGTCTCAGAAGATAGTGGAACTTCGTATCTAATACATGCACATTGCTTTTGAAATGAGAATTGACTTATAGCAACTAAAGATATTTGATCAAGGAAAGTCAAAGTAGGTCGTTAGCTTTTATAAACAGAACAATCTTGTTTGTGATTCTAAATAATGTTGATGTTGTCAGTTGTGTGTTTGATGTGTCATTAGCTATGTCTATTCTACTTTTTATTTCCATGGTGAATACTTGTCAAGGTACACATTCATCTTAAAGTAAAATTGTTCGTGTCAAGAAAGTAGTAAAGAAGAAGAAAGTTTTCATGAAGAATGCTTCCTCCCCGTGTGTCATTGCCTATGATGTTTGAGTGCCTTACCTTTCCTTCCCTCTCAACGGTGTCGTTAGTGTGAATTCCTGTGTTAACAAGAAGAGAATTGGCCCTATGAAAAACAAATTAGGAAGTAAATGTGTGATGTTAGACATGTTATTATGACAATGAAAGACCTTACACGTCATGTCACTGAGTCCACCAGGTATGTCTTTATTGATTCTTCAAGTTAATTCACTGCCTTTGCCAAAAAATTTGAAAGTAATACATCTACTACTATACCTAGTATTTCTTTAGAGAAATCTCGAAATTTGACTCATCTGGACTTGCATGTGAGTTCTAAAGAAACTAGGGTCATGAATGCTAACCAAATTACCTATAATGTTGATAGTACTGTGATAGAGTCTATGAATGTTGTTGATCATGTTGTACTTATTGAGGTTTTTAACCTTGGTAATCATGTTGATTATCGTGTTAAGTTGTCTGATATTTTGATTATTGTGCTATCTAAAACCACTATTGGTAATGTTGATCTGGTTGTCTTCTCTGTTATTGATCATACTACTCATCTTGAAACTGTTGTGTCTACTGTTGCTCTTCATTTTGATGTCCCCACACAACCTATCATTGGTAGTGTTGAGATTAATTTGGTGAATTATATGGATGTCATTGTGCCCACTAAGTTTGTTGTTACTTCTACTGAAACAATGATTGAACATATTGTGATTGTTGAGATACTTGTTGGGCTTCGTGTGTTGTATGAAGTCATGATTGATAATACTGCTTTGGATGGATCTTTGGGTAAAACCATTGTGTCTCCTAATACTATTATTGAATATGTTAGGCCAATTGGAAGTGTTGAAAATGTAAGTCATGTGCTTGTTGTCTCGACTAAAAAGAGAATGTTAAGTTTCTGTTTGTTATTCAAACTAAATCCACTGCTTTTGTTGTTGCTGACATTGTTCCCCAAGATGTTACCAAGGGTGTCGTACATAATATTGTGTTTATTGTGTCATTTCTTGATTATGATGTTGTTGGAACAAATGTGCAAAATATAAAGGAACACCTTAAGACATATAAGTCTCTTGACCTTGAAAAGGATATTGATAATGTTTCTGCTAATATTGATAGTTGTGTTTCTAAAGTGAATAAAGTTGTTATTTGTTACTTCAGCTTGTCATTTGGATGTTGTTAA ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTGCCATTGACGCTCTATGTGCCGCCGATTCGAAGCCTCAGTCTGTTCGTTGAAACCCTAGAAGATCTTCTCCGTCACACCGCCATTCATACGCTCAGAGTTTATCCTCGCTTCCGCGTTGCCTTCTCTCGCCTGTTCGCCTCTGTATTCCGCGTTTCTTATTCCAGTTGTGTGTTTGATGTGTCATTAGCTATGTCTATTCTACTTTTTATTTCCATGGTGAATACTTGTCAAGAGAAATCTCGAAATTTGACTCATCTGGACTTGCATGTGAGTTCTAAAGAAACTAGGGTCATGAATGCTAACCAAATTACCTATAATGTTGATAGTACTGTGATAGAGTCTATGAATGTTGTTGATCATGTTGTACTTATTGAGGTTTTTAACCTTGGTAATCATGTTGATTATCGTGTTAAGTTGTCTGATATTTTGATTATTGTGCTATCTAAAACCACTATTGGTAATGTTGATCTGGTTGTCTTCTCTGTTATTGATCATACTACTCATCTTGAAACTGTTGTGTCTACTGTTGCTCTTCATTTTGATGTCCCCACACAACCTATCATTGGTAGTGTTGAGATTAATTTGGTGAATTATATGGATGTCATTGTGCCCACTAAGTTTGTTGTTACTTCTACTGAAACAATGATTGAACATATTGTGATTGTTGAGATACTTGTTGGGCTTCGTGTGTTGTATGAAGTCATGATTGATAATACTGCTTTGGATGGATCTTTGGGTAAAACCATTGTGTCTCCTAATACTATTATTGAATATGTTAGGCCAATTGGAAGTGTTGAAAATGGTGTCGTACATAATATTGTGTTTATTGTGTCATTTCTTGATTATGATGTTGTTGGAACAAATGTGCAAAATATAAAGGAACACCTTAAGACATATAAGTCTCTTGACCTTGAAAAGGATATTGATAATGTTTCTGCTAATATTGATAGTTGTGTTTCTAAAGTGAATAAAGTTGTTATTTGTTACTTCAGCTTGTCATTTGGATGTTGTTAA ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCCGTGCCATTGACGCTCTATGTGCCGCCGATTCGAAGCCTCAGTCTGTTCGTTGAAACCCTAGAAGATCTTCTCCGTCACACCGCCATTCATACGCTCAGAGTTTATCCTCGCTTCCGCGTTGCCTTCTCTCGCCTGTTCGCCTCTGTATTCCGCGTTTCTTATTCCAGTTGTGTGTTTGATGTGTCATTAGCTATGTCTATTCTACTTTTTATTTCCATGGTGAATACTTGTCAAGAGAAATCTCGAAATTTGACTCATCTGGACTTGCATGTGAGTTCTAAAGAAACTAGGGTCATGAATGCTAACCAAATTACCTATAATGTTGATAGTACTGTGATAGAGTCTATGAATGTTGTTGATCATGTTGTACTTATTGAGGTTTTTAACCTTGGTAATCATGTTGATTATCGTGTTAAGTTGTCTGATATTTTGATTATTGTGCTATCTAAAACCACTATTGGTAATGTTGATCTGGTTGTCTTCTCTGTTATTGATCATACTACTCATCTTGAAACTGTTGTGTCTACTGTTGCTCTTCATTTTGATGTCCCCACACAACCTATCATTGGTAGTGTTGAGATTAATTTGGTGAATTATATGGATGTCATTGTGCCCACTAAGTTTGTTGTTACTTCTACTGAAACAATGATTGAACATATTGTGATTGTTGAGATACTTGTTGGGCTTCGTGTGTTGTATGAAGTCATGATTGATAATACTGCTTTGGATGGATCTTTGGGTAAAACCATTGTGTCTCCTAATACTATTATTGAATATGTTAGGCCAATTGGAAGTGTTGAAAATGGTGTCGTACATAATATTGTGTTTATTGTGTCATTTCTTGATTATGATGTTGTTGGAACAAATGTGCAAAATATAAAGGAACACCTTAAGACATATAAGTCTCTTGACCTTGAAAAGGATATTGATAATGTTTCTGCTAATATTGATAGTTGTGTTTCTAAAGTGAATAAAGTTGTTATTTGTTACTTCAGCTTGTCATTTGGATGTTGTTAA MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRVYPRFRVAFSRLFASVFRVSYSSCVFDVSLAMSILLFISMVNTCQEKSRNLTHLDLHVSSKETRVMNANQITYNVDSTVIESMNVVDHVVLIEVFNLGNHVDYRVKLSDILIIVLSKTTIGNVDLVVFSVIDHTTHLETVVSTVALHFDVPTQPIIGSVEINLVNYMDVIVPTKFVVTSTETMIEHIVIVEILVGLRVLYEVMIDNTALDGSLGKTIVSPNTIIEYVRPIGSVENGVVHNIVFIVSFLDYDVVGTNVQNIKEHLKTYKSLDLEKDIDNVSANIDSCVSKVNKVVICYFSLSFGCC Homology
BLAST of CaUC04G067840 vs. NCBI nr
Match: KAE8649764.1 (hypothetical protein Csa_012384 [Cucumis sativus]) HSP 1 Score: 120.2 bits (300), Expect = 3.6e-23 Identity = 68/90 (75.56%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of CaUC04G067840 vs. NCBI nr
Match: KAA0060071.1 (RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa] >TYK29882.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 119.0 bits (297), Expect = 8.1e-23 Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of CaUC04G067840 vs. NCBI nr
Match: KAG6603254.1 (hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 110.5 bits (275), Expect = 2.9e-20 Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of CaUC04G067840 vs. NCBI nr
Match: KAG7037385.1 (hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.5 bits (275), Expect = 2.9e-20 Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of CaUC04G067840 vs. NCBI nr
Match: KAG6595630.1 (hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027603.1 hypothetical protein SDJN02_11617, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.8 bits (273), Expect = 4.9e-20 Identity = 61/75 (81.33%), Postives = 65/75 (86.67%), Query Frame = 0
BLAST of CaUC04G067840 vs. ExPASy TrEMBL
Match: A0A0A0KZF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G569720 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-23 Identity = 68/90 (75.56%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of CaUC04G067840 vs. ExPASy TrEMBL
Match: A0A5A7V2T5 (RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001360 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.9e-23 Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of CaUC04G067840 vs. ExPASy TrEMBL
Match: A0A5J5SU59 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A01G208900v1 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 6.5e-18 Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CaUC04G067840 vs. ExPASy TrEMBL
Match: A0A0D2MES3 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G230100 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 6.5e-18 Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CaUC04G067840 vs. ExPASy TrEMBL
Match: A0A5D2RVA8 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A01G232800v1 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 6.5e-18 Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CaUC04G067840 vs. TAIR 10
Match: AT3G52105.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 4.0e-12 Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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