CcUC09G180810 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCGTGATTGGGATGCCGTGTCAGTTGAATTGTTTGGAAGGAAACTGAAGTCCGATCGTAGTTTTGCTTTGGGCATCGCGAAATCGCCATTTCTTAAAGGCTTTGAATTTGATGCTCTCTCTTCAGAGTTGCATTCAACCTAATCTGCCGGAGATCAATCAAAATGCTGAAATGGAGTTTCTTGAATTCCATTCTTTTGGGCTTCATGTTCACCGTTGCTGATTCGATGCGGTTCGATCTTCAATCGGGCGCCACCAAATGCATTTCCGATGACATCAAGACCAATGCCATGACCGTCGGCAAATATTCGGTGGTTAATCTCAACGAAGGTTTTCCCATTCCCGATTCTCACAAGCTCACTGTCAGGGTATTGTTATTCACTTTTCCCTTTCCGATCCAATGCTTTATCTTCTCCAATCTGGATTTGGACTGTATCATGATCATCTCTATTCTGTTTTCAAATTGAGACTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTTTGTGTATTTGTTTAGATCATTAGTTTGTGGTAATGGAGGTTCTTATTAATTAGGTCAGTTCGCCTCACGGCAACACGTATCATAATGCGGATCATGTTGAATCTGGACATTTTGCTTTCACTGCAGCCGAGTCTGGTGATTATACTACTTGCTTTTGGGCTCCGGAACAAAAGCCCCCAGGTTCAGTTACGGTTGAATTTGATTGGAGGTCTGGTGTTTCTTCTAAGGATTGGTCCAAGGTTGCTAAGAAAGGCCAGGTTGAAGTAAGTCCTGAAATTTCTCTTTTTTCTTTCTGGCTTACACATGGATGCATTTGCTCATTGTTTGGTGTTTTAATTTCTTAACAATTATCCTTACAACAATTAATTTTGCATGATATTATGTTATTCTTTGAATAATTATGATAAACTTGTGGACATTGTGGTGGCTGTGTTCGTGTTAGATAATAATTTGATTTGATATGCATTCAGTTTGTTTAATAGGTTTTCTCTCCTTTTGCTTCCTTAAAATATCCTTAAAACAATTATGTTGTCAGCAAGAATCTCCCCCCTTTTTTTCACTATGGAATCAAGCAAAAGGAGACCAACCTCAAGACAGTGTCAATGATATCATTTCTCTCCTGCACAACCAACTGAAGAACTTTTAACCTTCTTTGGGATGTTCACCTTCTTGAGGTTGGCCCAAAAAAAAAAGAAAAAAAGGAAATGGGCCCTCATAAAGCGAGAGGAGATGAAGTGTATAATGGGAAAAGAAGAAAGAAACAAGAAAAGAGAGAGAGAGAGAGAGAAGAAAGGTGCTGCCAGAGAAGACACCAGAGAAATAGAGGATCCAAATTCTTTTTGTTCTGAAGATTAGCACTAAGGACCACCTCACTGGTTGAAGGTCAGCCATCATTTAAATTCCTTTTGAAGCTAAAATTGAAGGGGACCCTTGAAGCGAAAAATGCCAAAGAAGCCATAAAATTCTGGAGGAATGCAAAGTCCAGATCCTTTTATCTAGAAGTAAGGACTACCCTAATGATGGAGGCAGGATTATCATTTGAATTCCTGTTGAAACTGAAAATAACTAAGAGGATCATGCCTGTGGATCACAGATCTGGGTTAGAGATATAAAAAATAAAACTATAAAAGGACAAAAGCAAAAAGGAATATAAGTCTTTCATATACAATGATTATTTATGGGTTCGAGTGGCTCCTAATTTATGAAGTTTATGCTGATGTTTTCATCATATGGTCTCAATATGCTACTCTAGATCTCATAATGTATGACATGATTGAAATATAATAAAGAATGTATACTTTCACCAATGTGTCCTTGTCTAAACTGCATTTGCATCTCATTATTCTTGTGGCCCATGTCCATATCTTTTAGGAGGTGTTGAGGTAAGGAGTGAAATAATGAGGAGTAGGGAGCTATGGAATCTAGGGAGTTGTAAACTCTTGGGGCCCACAGTGTAAGGAGTTGATAAAATATAAAATTTGATCCTTTTTCGTAGTGGGGCCCACCAACTCTTTGGACCAAATTGGGAGTGGAGTTCACAAACTCTTGCTTCGATACTCCTACTTTACAACTCCTTGGGCCAAACACACCCTTAGGTATTTATTGTATCACATTTCACAAGACATTGTTTTTCCATTGAGTTCTTTTTTTTACTCCCATAATAATATGTTAAGAGTTCCATTTATTTCAATAAGGATCTTTTGAGATTCTGTTTTGAACTCTTCTCTACATAAATGTAGAAGATGGGCTCTCATTTTTGTTTTCTAGACGAATCTGTCTGAAATAGTTCATCATCTCTTATGCTAGGTAATGGAATTCGAGTTGAAGAAGTTGTACGACACAGTCATCTCCATACATGATGAGATGTTTTATCTCCGTGAAAGGTACACACTATAATGAATTGAGTTTCTGAAGAGCCTATAAGAAATGGCAGCATCTCTCTTGCCTTAGGGGGGAATATGATCTTTTTTTACATGTCATCATTCATCATAACCATACAGAATTTGATTAAAAAGATATTCGATTAAGATTTATTCTGCTACAATGTGACGATATTCCTCAAGAGAACTTAGTTCATTGGCCTTTGTATCTTTGTGGGCTCTGTACTTTGTAGATTCATTTCATTCTGTCTGAGTTGATGGTGTGACGATTGATTCTCTACTATTATTGTTTGGTTTTCAGAGAGGAGGAAATGCAGCAACTGAATAGATCAACAAATGCAAAGATGGCCACCTTTAGTTTCTTATCACTTGGAGTTTGCTTGTCTGTGGCTGGTTTACAGTTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTGTGATTTTTCCCCTCACATATAAACTCTCTCCCACTCTTTACTTCTGATATATTATTTTTTAAAAAATTCTTTGTCTTTTTCTTTTCCTTTTTAAAAATTTTATTTTATTTTCATTTTGGGCTATTAGATGCAACAGTTTATG GGCGTGATTGGGATGCCGTGTCAGTTGAATTGTTTGGAAGGAAACTGAAGTCCGATCGTAGTTTTGCTTTGGGCATCGCGAAATCGCCATTTCTTAAAGGCTTTGAATTTGATGCTCTCTCTTCAGAGTTGCATTCAACCTAATCTGCCGGAGATCAATCAAAATGCTGAAATGGAGTTTCTTGAATTCCATTCTTTTGGGCTTCATGTTCACCGTTGCTGATTCGATGCGGTTCGATCTTCAATCGGGCGCCACCAAATGCATTTCCGATGACATCAAGACCAATGCCATGACCGTCGGCAAATATTCGGTGGTTAATCTCAACGAAGGTTTTCCCATTCCCGATTCTCACAAGCTCACTGTCAGGGTCAGTTCGCCTCACGGCAACACGTATCATAATGCGGATCATGTTGAATCTGGACATTTTGCTTTCACTGCAGCCGAGTCTGGTGATTATACTACTTGCTTTTGGGCTCCGGAACAAAAGCCCCCAGGTTCAGTTACGGTTGAATTTGATTGGAGGTCTGGTGTTTCTTCTAAGGATTGGTCCAAGGTTGCTAAGAAAGGCCAGGTTGAAGTAATGGAATTCGAGTTGAAGAAGTTGTACGACACAGTCATCTCCATACATGATGAGATGTTTTATCTCCGTGAAAGAGAGGAGGAAATGCAGCAACTGAATAGATCAACAAATGCAAAGATGGCCACCTTTAGTTTCTTATCACTTGGAGTTTGCTTGTCTGTGGCTGGTTTACAGTTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTGTGATTTTTCCCCTCACATATAAACTCTCTCCCACTCTTTACTTCTGATATATTATTTTTTAAAAAATTCTTTGTCTTTTTCTTTTCCTTTTTAAAAATTTTATTTTATTTTCATTTTGGGCTATTAGATGCAACAGTTTATG ATGCTGAAATGGAGTTTCTTGAATTCCATTCTTTTGGGCTTCATGTTCACCGTTGCTGATTCGATGCGGTTCGATCTTCAATCGGGCGCCACCAAATGCATTTCCGATGACATCAAGACCAATGCCATGACCGTCGGCAAATATTCGGTGGTTAATCTCAACGAAGGTTTTCCCATTCCCGATTCTCACAAGCTCACTGTCAGGGTCAGTTCGCCTCACGGCAACACGTATCATAATGCGGATCATGTTGAATCTGGACATTTTGCTTTCACTGCAGCCGAGTCTGGTGATTATACTACTTGCTTTTGGGCTCCGGAACAAAAGCCCCCAGGTTCAGTTACGGTTGAATTTGATTGGAGGTCTGGTGTTTCTTCTAAGGATTGGTCCAAGGTTGCTAAGAAAGGCCAGGTTGAAGTAATGGAATTCGAGTTGAAGAAGTTGTACGACACAGTCATCTCCATACATGATGAGATGTTTTATCTCCGTGAAAGAGAGGAGGAAATGCAGCAACTGAATAGATCAACAAATGCAAAGATGGCCACCTTTAGTTTCTTATCACTTGGAGTTTGCTTGTCTGTGGCTGGTTTACAGTTATGGCATCTCAAGACATTCTTTGAACGCAAGAAGTTGCTGTGA MLKWSFLNSILLGFMFTVADSMRFDLQSGATKCISDDIKTNAMTVGKYSVVNLNEGFPIPDSHKLTVRVSSPHGNTYHNADHVESGHFAFTAAESGDYTTCFWAPEQKPPGSVTVEFDWRSGVSSKDWSKVAKKGQVEVMEFELKKLYDTVISIHDEMFYLREREEEMQQLNRSTNAKMATFSFLSLGVCLSVAGLQLWHLKTFFERKKLL Homology
BLAST of CcUC09G180810 vs. NCBI nr
Match: XP_038890728.1 (transmembrane emp24 domain-containing protein p24delta9-like [Benincasa hispida]) HSP 1 Score: 402.1 bits (1032), Expect = 2.9e-108 Identity = 200/211 (94.79%), Postives = 203/211 (96.21%), Query Frame = 0
BLAST of CcUC09G180810 vs. NCBI nr
Match: XP_022134512.1 (transmembrane emp24 domain-containing protein p24delta9-like [Momordica charantia]) HSP 1 Score: 384.0 bits (985), Expect = 8.2e-103 Identity = 186/211 (88.15%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of CcUC09G180810 vs. NCBI nr
Match: XP_022993670.1 (transmembrane emp24 domain-containing protein p24delta7-like [Cucurbita maxima]) HSP 1 Score: 382.5 bits (981), Expect = 2.4e-102 Identity = 188/211 (89.10%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of CcUC09G180810 vs. NCBI nr
Match: XP_008459344.1 (PREDICTED: transmembrane emp24 domain-containing protein p24delta9 [Cucumis melo]) HSP 1 Score: 381.7 bits (979), Expect = 4.0e-102 Identity = 189/212 (89.15%), Postives = 197/212 (92.92%), Query Frame = 0
BLAST of CcUC09G180810 vs. NCBI nr
Match: XP_022962691.1 (transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita moschata] >KAG6602511.1 Transmembrane emp24 domain-containing protein p24delta9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033184.1 Transmembrane emp24 domain-containing protein p24delta9 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101 Identity = 187/211 (88.63%), Postives = 195/211 (92.42%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.0e-71 Identity = 130/202 (64.36%), Postives = 164/202 (81.19%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy Swiss-Prot
Match: Q8GYG1 (Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana OX=3702 GN=At1g14010 PE=2 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 9.5e-70 Identity = 123/202 (60.89%), Postives = 160/202 (79.21%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy Swiss-Prot
Match: Q8VY92 (Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana OX=3702 GN=At1g69460 PE=1 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 1.8e-65 Identity = 119/208 (57.21%), Postives = 161/208 (77.40%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy Swiss-Prot
Match: O81045 (Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana OX=3702 GN=At2g03290 PE=1 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 7.0e-65 Identity = 118/192 (61.46%), Postives = 152/192 (79.17%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy Swiss-Prot
Match: Q9LJV9 (Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana OX=3702 GN=At3g29070 PE=2 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 2.9e-63 Identity = 120/211 (56.87%), Postives = 158/211 (74.88%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy TrEMBL
Match: A0A6J1BZT5 (transmembrane emp24 domain-containing protein p24delta9-like OS=Momordica charantia OX=3673 GN=LOC111006738 PE=3 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 3.9e-103 Identity = 186/211 (88.15%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy TrEMBL
Match: A0A6J1JZ64 (transmembrane emp24 domain-containing protein p24delta7-like OS=Cucurbita maxima OX=3661 GN=LOC111489593 PE=3 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102 Identity = 188/211 (89.10%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy TrEMBL
Match: A0A1S3CAG6 (transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo OX=3656 GN=LOC103498505 PE=3 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102 Identity = 189/212 (89.15%), Postives = 197/212 (92.92%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy TrEMBL
Match: A0A6J1HDX5 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita moschata OX=3662 GN=LOC111463104 PE=3 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 5.7e-102 Identity = 187/211 (88.63%), Postives = 195/211 (92.42%), Query Frame = 0
BLAST of CcUC09G180810 vs. ExPASy TrEMBL
Match: A0A5D3BN42 (Transmembrane emp24 domain-containing protein p24delta9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002690 PE=3 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 9.7e-102 Identity = 188/212 (88.68%), Postives = 196/212 (92.45%), Query Frame = 0
BLAST of CcUC09G180810 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 271.2 bits (692), Expect = 7.2e-73 Identity = 130/202 (64.36%), Postives = 164/202 (81.19%), Query Frame = 0
BLAST of CcUC09G180810 vs. TAIR 10
Match: AT1G14010.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 264.6 bits (675), Expect = 6.7e-71 Identity = 123/202 (60.89%), Postives = 160/202 (79.21%), Query Frame = 0
BLAST of CcUC09G180810 vs. TAIR 10
Match: AT1G69460.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 250.4 bits (638), Expect = 1.3e-66 Identity = 119/208 (57.21%), Postives = 161/208 (77.40%), Query Frame = 0
BLAST of CcUC09G180810 vs. TAIR 10
Match: AT2G03290.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 248.4 bits (633), Expect = 5.0e-66 Identity = 118/192 (61.46%), Postives = 152/192 (79.17%), Query Frame = 0
BLAST of CcUC09G180810 vs. TAIR 10
Match: AT3G29070.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 243.0 bits (619), Expect = 2.1e-64 Identity = 120/211 (56.87%), Postives = 158/211 (74.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|