CcUC09G165750 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G165750
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 2625391 .. 2626946 (-)
RNA-Seq ExpressionCcUC09G165750
SyntenyCcUC09G165750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGCAGGCGACAGACTTCTGCCTATATTCAATTGCAATCAATGAAAACAGAAATTTTTATTAACCAAAATGCCGTAGTCCATAAACAACCCTGTCAATGTGCATGGATAAACATATCAGAAGCTAATGCTAATGCCCAACCTCCAGAGATGAGTAACGGCTCTCATTCAAATGCTTGTAGAAGTTATCGGCTGAATCTTGACTTCGAAATCTGATTAATATACTGTACCTGTCCTCCATCCCATCACCTCTACCCCACGCAGGAACATCAATAATAAAGAAATAAATAAAAACCAAAATAAAACTCACAATATCTATAGAGAAATACCTAATGACTAAAAACAGGAATAATAGTTTAGCACTTAAACCTGACAACTCGCATCTCCAAAATTTCATGAATGAAAGAACCACAAAATTGGCAGAAGTCAGCATAAGTCATATGATTTGGCACTCCAAGTACACATACAAGAGGCTTCCTCTCAACCTAAGCAAAACACAGTATTTGTTCAGAATAGAAAACGAACTTGCATATAAGAAATCCCAACTGTGGGATCACTATTGTTTATCGAGTGTGTTATAAAATCGACAGTCCAAGAAAGCGAGAAAATGACAACCAATAATGATGTTGAATATTTCGGAAATTTTGATTCGATAAAACTTCCTACAATCCCTTGAAGTGAACAAAAGAAAGTTCAATTTCAAACCCATTTGGTAACTATTTGGTTTTTTATTTTTTAGCTTTTAAAAATTAAGCCTATAAAAACCACTCCCACCCTCAAAATTTCTTACTTTTGTTATCTATCTTTTTATCAATATTTTGAAAAACCAAGTAAAATCTTGAAAATTAAAGAAAAAAAGAAAGTTTTTAAAAACTTGTTTTTGTTTTTAAAATTTAGCTAAGAACTCTTGTACTTAATAAAAATAAAGATCATTGTAAGAAAATAAGATGAACTAGGCTTAATTTTCAAAATTCAAGAACAAAAAACAAAATGGCTACGGGCCTAAATTATTCATCCTATTCATACATATAAGAGTGCGGTAGAATTTGAAAGCTAGGCTAACTTCTTGCCAAGAAAAACCCCAATACTGCCCTAGAAAACCCCAACAATAAGCCATAGTATTATCCCAAACAACAGAAATCGTCTTGAAGATTGACAAATTGAAATTCTACTGCAAAGAAGCGCAAGAAATAAAGATTAAAGAATCGCAGCTCACAGGGAGAGCAGAAGATGATGTCGAAGATGAGGAGGAAACGTCATCTCGGAATAGGTGTACGACACCTCTGATTTCCTCGATTCTGGGGTTTCCAGAGGAGAAATGAAAGGCCTGTGTCAGACCGGAAATGGAGGAGGATGAAGTGGAAGAAAAATCACTGGAATCGCCTGAAACCAGTGACGATTTCGGAGGCCGGAACCCTTCATCGAAGGTGGCCAGTACGTCGGTCGAGCTAGTTGGCATTCCGGCGACTGATTGCGACGGCAGAATTGAGTTTTCGCGGGGAAACGATTTTATGCTCCTCTTGTACCAAATCAACGCTCAACAGCTAACATAA

mRNA sequence

ATGAAAAGCAGGCGACAGACTTCTGCCTATATTCAATTGCAATCAATGAAAACAGAAATTTTTATTAACCAAAATGCCGTAGTCCATAAACAACCCTGTCAATGTGCATGGATAAACATATCAGAAGCTAATGCTAATGCCCAACCTCCAGAGATGAGTAACGGCTCTCATTCAAATGCTTGTAGAAAAATCGTCTTGAAGATTGACAAATTGAAATTCTACTGCAAAGAAGCGCAAGAAATAAAGATTAAAGAATCGCAGCTCACAGGGAGAGCAGAAGATGATGTCGAAGATGAGGAGGAAACGTCATCTCGGAATAGACCGGAAATGGAGGAGGATGAAGTGGAAGAAAAATCACTGGAATCGCCTGAAACCAGTGACGATTTCGGAGGCCGGAACCCTTCATCGAAGGTGGCCAGTACGTCGGTCGAGCTAGTTGGCATTCCGGCGACTGATTGCGACGGCAGAATTGAGTTTTCGCGGGGAAACGATTTTATGCTCCTCTTGTACCAAATCAACGCTCAACAGCTAACATAA

Coding sequence (CDS)

ATGAAAAGCAGGCGACAGACTTCTGCCTATATTCAATTGCAATCAATGAAAACAGAAATTTTTATTAACCAAAATGCCGTAGTCCATAAACAACCCTGTCAATGTGCATGGATAAACATATCAGAAGCTAATGCTAATGCCCAACCTCCAGAGATGAGTAACGGCTCTCATTCAAATGCTTGTAGAAAAATCGTCTTGAAGATTGACAAATTGAAATTCTACTGCAAAGAAGCGCAAGAAATAAAGATTAAAGAATCGCAGCTCACAGGGAGAGCAGAAGATGATGTCGAAGATGAGGAGGAAACGTCATCTCGGAATAGACCGGAAATGGAGGAGGATGAAGTGGAAGAAAAATCACTGGAATCGCCTGAAACCAGTGACGATTTCGGAGGCCGGAACCCTTCATCGAAGGTGGCCAGTACGTCGGTCGAGCTAGTTGGCATTCCGGCGACTGATTGCGACGGCAGAATTGAGTTTTCGCGGGGAAACGATTTTATGCTCCTCTTGTACCAAATCAACGCTCAACAGCTAACATAA

Protein sequence

MKSRRQTSAYIQLQSMKTEIFINQNAVVHKQPCQCAWINISEANANAQPPEMSNGSHSNACRKIVLKIDKLKFYCKEAQEIKIKESQLTGRAEDDVEDEEETSSRNRPEMEEDEVEEKSLESPETSDDFGGRNPSSKVASTSVELVGIPATDCDGRIEFSRGNDFMLLLYQINAQQLT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G165750.1CcUC09G165750.1mRNA