CcUC06G117990 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G117990
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionlysine-rich arabinogalactan protein 19
LocationCicolChr06: 11642201 .. 11648552 (+)
RNA-Seq ExpressionCcUC06G117990
SyntenyCcUC06G117990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACACACATTTCCATGTAAGAACATATCTTTTCACCAAAATACCTATTCACAAGTTTTATTTATCATCTTTCATTTCATTTCTTTGTTTTGATTTTGGTTCATTACAGTGATGGTTATTGATATCGTCTTTCTTCTCATCTTCGTTATTGCTTGGTGTGCAATGTGGATGATTCGGCACTAAATTTTTCAACAATGTTGTCTAAAGGTATGAGTGTATCCATATTATATTTGATTCACTATAAAATGTTCATTTGTTCGATTTCTTCTATTTTACCATAGGGTAATCTTATAATTAATGAAATCAACTAATTCTTTATCTTCCTATGTTCATTGGTGTGTTTTTTATGTTTCTTATATTCGGAATTTGTGTTCTTCGTTGGCATTCTAAACAATGTTTTGTCAGAAAAAATTGTTAGGATTTAAGCATATATCTAAAGAGTAGTTGATTGAGATGGATATTAACATGAAAGAAGAATTAAAAAAAGAGAGAGAGAGATAGAGAGAGAGAATTTGAGAAAAATAGGCAATAGGGTAGATATGAAGTTAGGAGTTCGGAATATAATTTTCCTAATTTTAATTTTTAGAATCCCATCATGATTTAATTATTGTATTCATTTTCATTATTTGTTCTCGATGGCGTAATTAATGGAAACAACTAATTATTTAGAGTGTTTTTTCTTTTATTTATTATGTTGGGGATTTGTGTTCTTTGTTGGCTTTCTAAATATTGGATTCTAAGTATATGTGAAGAGTACTTAGTTGAGATGAATATTTTTTTGTATTTTATGTCATATGGATATTGTTATATCGAACTCAAATGTTCTAAGGTATATTATATTTAAAAATACTTGCACACATCTAATACAATGTTCTAATGGATGTTTAAAAATAACCATGAATCTACCAGAAAAACCGACAAGTTGCTGTGAAATCAACTGTATGTGAGTACATATCAAATATGTTTACCAGTATATTTCATATATTAGTTAATAACATTTGTAAGAATCTAATATAATGTTCAAATGTACATATAAAAATAACATGAAAACATAGAGGGTGCCGGAAACTAACAAGTTGCTACGAAGAGGGGAAAATATAACATATTAAATACATTTTCTTTCTCCAATTGAAAATGAAAAAATTATATTAAATAAATTTTGTCTCTCCAATTAAAAAATGGGAAAAAATTCATATTAAATGCATTTTCTCTCGCCACAATAAATGTATTTTCTCTCTCCATCATTAAGAAAACTTTGTAAATAGGGAAATATATATAAATAAATGAAAAAAAAGAGTAAAATTGTCCAAAATTAACCCTAAAAGCCTTTTTTGAAAATTTAATAACATTTATGAAATATATGACCAAAAGATGATTATTTATGTAAAGACCTCTCTCTTTTTGTAATTTCTTTTGGGTTTTGCTATGTTTGTTATTATTTTGACCAGTAATATTTAAAATCAACTCATAATTAATTGAATTGAATTTGAGTCAACATCATTTAAAGCGTATGTCTTAAGTAAAAAGTAATATCGTAGATTAAATTTGAACAACATTTGAAGGATAGGAACAATTGTATTGTTGTTGTTAATTAATTTTGCATCAAAACTTTTTGTAATATAGAATGTAATTTTTTTATAATTGTTTTTTTATGTATATTTAATGCATGTTATCTAATTTTATATTATATAATTAAATTATATTTAAACTAAAAACAATGAAAACTATAAGGAAAAAAGATTTAAAAAAATAATCAAATAAATTTTCATTTCTATTTTTTTTTTTTTGAAATATAGGAAACATAAATAATCATCAAATATATTTATGTTTTTACTTCTTATAATACAGAAAATAAGAAATGCTACCGAGGAAACCTTGAGAAGTAAAATAGAAATTATAAAAGTGTAGAGAAAATGAATTAAATTTTAATTTAAAATTTGAAGATAAAAAAGAAATACGAGGCAACAGTAAGATAGTTGAAAGATAATTATAAAATTAATGTCATCCTTTTTTTTAGTATAATATTTATGAAGTTCAATCTTAGAGGCGGGAGATTTAATCTTCATTCTCACACATTTGGTGTACTGCAACCAAAAAAAAAAGTCATTTATCTATTGCATTTGATTATTTGTTACAGTACTGTCAAACATTTTATAGACTTAATCAGCTCCAAAATGGCCTAATAATTGGAAATGGGCCCAATTGTTGTTTAGAGGAAACTCTTGACCTTCAACTATTTCCTTCGAAAGAAAAAGAAGATGGGGATGTGAACTCCTTACCAATGTTCAGGTCTAATGTTAATATCATTGGCGCGGACCCTTTAATCTTTTTTCTTTCTTTTCTTTACATATGGAAAATTGATTTTGAAGAATAACTAAATAAATACAAATAATTTTATTTTCAAAGATAAATTTCTACTAAATTATCTTTTTCAAAACTATTTTATATAATTTACTTCTAAACAGAAATGTTTTTTCTTCTTTTTTCTTTTTTACAATTCTAAAAAGTGGCATTTTGATGGAAAATATATGTTTAAACCAATTAAGGAATCTCAATTAGGTTAAAAGGATAGTTAACCAATAAATAGATCAATCTTTAGGATATTAAGTCTTAGTAAAATCAAATTTTCTTTTTTTTAAAAAAAAAATTCAGTTTATTCATTTAATATTAGAAGTTTGGAATGTGCCATATTTTTGTCAATATTTTTGAAGCTAGACCTTCAAGGAAAACATTAAAAAGAAGAAAAGACGGGAAAAAAATCATCTAAATTTGTTTGATCACCATCCTTTTTTCTTTTGTACTTCCATGAAATGTTGTTGAAGTAATAATTATAATATAATATAGGAAAAATGGTATTAATTATGATGGAAGAAATCAATTGATGATTCTGGAAGCCATGGAAGTTACCCATCAGTATCAATATGAAAGCTACCATTCTCCCTCCACATTACACCAAACAACTTTCCTTCAACATTAGTCATTCAATAAATGACTCGTACCATTTCCTTCTCTTAATTCCCATCTTCAACCATGGCTTCCAAATCATGGCCTTTTTTGGTAATTTGCCTTGGCTTTCTATTCCCTTCCGCGATCGGCCAGGCCCCGGCACAGCCACCAAGCTTGCCAACTGTCTCACCACCGCCTTCCACTCCGCCTCCGACCGCAACAACTCCTCCACCCTTGTCAACACCACCGCCTAATGTTGCACCATCAACAAGCCCAACCATTCCACCACCCCAACCACCACAAAGTTCACCTATCTCAACCCCGTCGCTACCACCAGCATTGCCACCTCCCCCCGCTACGCCTCCGCCATTGCCACCTCCTTTACCACCACCACAAGTCTCTCCAACTCCTTCACAGGCACCACCGGTGCCAGCTCCCACCCTAGCACCATTACCAACTCCGCCAACACCAATGTCGTCACCACCAACGCTAGCACCAGTCGCGGCACCAGAGTTATCCCCTGCACCTGCGCCAGGAAAGCATAAGCGTAGGAGGCATCACAAACATAAGAAGCATCAAGCACCGGCCCCGGCCCCAACCGTCCCAAGCCCACCAGCACCACCTATAGTGGTGGACTCACAAGATAGCACAGCGCCAGCGCCATCACCAAATCTGGTAAAGTAAATCAACCTTCATTATGTTTATTTGTTTTTCATTATTATTCAGATATCTCTATGATTAATGAAGGTTAATAAAAATTAGCTAACGTATATTATAAAGAGAATTTCTACATATGTAGAAAAAAATTGAGACTAATGTAGGTAGGAAAATATAATTTAAAACCATATCTATATATATATATATTATATATTAGCAAACTTGAATTGGAGATTAGTGTTGTTAATACCGTATTTTATCTTTATTCACAGAATGGAGGAGACCCAATGAAAGGAAAGGTGGGAACATGGACTAGAGTTGTACTGGGATTCATATTTCTAGTTGCTACCACAGGCTTCAAATTCTAATTTTGAAGAGAGAATTATTCACAAGGAACCCATTATGGTTCATAAAATTATAGAATTGGCCCAGAATCTGTGAGATACTTCAATACTTCGATTTTTTTTTTTTATGATTTGTGGCTTGGAATAATAATGAGTTTTTTAATTTTATTGTGGTGGTCAATTATCTTCTAACTTGCAAGCTAATTTCCACATGTAACAACCCAACTTCTTAAGACTTGAATTATCCCCTTACTATATGCATGCACACATTTCAAATGACCAAATATTTTAGTTAAAAATCAAAGAATTTTATTAAGGTAAATAACTTTTGCAAAATCTAAATAACTGAAAATCTTTAGTCAGGGTACCTCAAAAGAAAAATAATGAAATAAAACAGTAAACTTTGCATAAAGCGTCTAGCTGTGAGAAATAAATAAATAAACAAAACAATGTTTCGAATTCAAATGACAAGACCAAAATTATTAAACATGAAAACATGAAAACAAACATGAAAACTTGTGCGGAAGTATCTGGTACGGTCATGGATTTCTTTCATTATTCACCGAGGTGTCCTTTCCCTTACCTGAAAAAAATAATATGAAAAGGATGAGTATAAAATACTCACTAAGTAGGCCAAACACTTACATCCAATAAGTGTAACATACTAGTGGGACATGCATAAATCAACTAATCCTGGATGGCCATCTAGTGAGTGTTACGTTTTAACCCAACCTAACACGCATTTGGAGGTTACAAATATAGTAGGGCACCCGTCGACACTTGTTAACATAATAGGAAATCCACCGGTTTCGAAAACATAGCAAGAAACTCGTAGGCTTCCAATAACATAGTAGGAAACCCGTAGGCTTCCAATAACATACTATTGTTATGAGGATAAATCATCATTTTTATCTCAAGATATAACATGCTCACACTAAATTCACATCATAAATTATAGTGCATGTCTCAAAGTCCTACAAATAATCGTATCAAGCACATGCTAGTACATCAAGCTCATAAAACAGTTCTAATCATATCAGGCTTATCAATTTCACCCAAACTAAAGAAATCAATCAGCTATCTAAATCGTCTGACTCAAGGGCAGTTCTAGTAATAAGATTACTTACCTCAAAATTAAAGACCAAATATGTTCTCGCAACAAAACAATTTCCAACAAAGCTTGAATACAAACCTACATATGCAACACAAGTTTGAAATTCAAAATCCAACCCAAAAACCTACTTCCACTCAACAATTTAAGCACGTCACTCCAAATAACTTACCCAAGTGTGGTTTGACCCATAACCGCTCCCCAACTTTCCAAAAATATGATCTTAAGCCAAACTCCTAAATTTAAGGATCAGAATCCTAAAATTTCATCATCAAAATCCAATCTAAATATTCGTTGGAAACTTAATAATCTTGAATATTTACAAAAACCGCCAAAATGGACCCTTATTGCAATTGGACAATGGCTCCAAAAGCTCCAAATCTTCAATCTAGAGCCAAAATATTGTGGGTATCAAAGAATCGAAACCAACACTTAATGGGTATTCAAGATTGAACCAACCAAAATTAATCCAAACACCCACAAAATTTACCCAAAAACCCAATTGAAAACCGACCAGAAACAACAGTTACTAATGGTAACAGTCGACGATGATTGAAAGACGAGGATGACAAGAGTGGTTGAGTCGACAACAAACAAACCTGAAGCAAAATACCAACGACACGTTGAATCTGGAACCACGAATGACAGCGTACGCTGACAGACGACCCAGATGGTGCTTGGACCGACGACGAATAGGCAGAGCATGGTGGCGTCACAACAAACGATAGCTGAGGAGAGACACTAGTGTGTGTGTGAGAGAGAGAGGGTCGGGAGTCTGCCTTTTCTTTTACCTTTTCCCTCTACAAATTCACCAAACTAAATCAATTCCTCCAGATTAAAAAAAAAAAAAAAATCGAAGTTTCAAATATCTTAATAAATTCAATTTTCACCAATTGAATTAAATTAAAAATTTCTAAATCTTTATCTAATTCAATTATCTAAACCCAATAATTCAATTTTAGCCTTAAAAATCAAATTAATACCCAAATGATTCAAGATAATTAAAATAAAAATTACCTAAAAATTCGGGATGCTACCTTCTTCCCTCCTTAAGAAACTTTCACCCTCGAAAAGCTCTAATCCTGAAAAAGCTCTGGGTACTTTGTCCTCATCTCGTCCTCTCGTTTCCATGTTGCATCCTTGAACTTTTGATTTTGTCATAGAATTTTCACTAGAGCTATCTCTCAATTGTATAAAGCCTTTACTTCTCTTGCAAGAATTTGAATCTACTTTTCCTCATAACTCAGGTTCTCACACAATTGTAAAGGTTCATACTCCACAACATGAGACGGGT

mRNA sequence

CAACACACATTTCCATTGATGGTTATTGATATCGTCTTTCTTCTCATCTTCGTTATTGCTTGGTGTGCAATGTGGATGATTCGGCACTAAATTTTTCAACAATGTTGTCTAAAGGAAAAATGGTATTAATTATGATGGAAGAAATCAATTGATGATTCTGGAAGCCATGGAAGTTACCCATCAGTATCAATATGAAAGCTACCATTCTCCCTCCACATTACACCAAACAACTTTCCTTCAACATTAGTCATTCAATAAATGACTCGTACCATTTCCTTCTCTTAATTCCCATCTTCAACCATGGCTTCCAAATCATGGCCTTTTTTGGTAATTTGCCTTGGCTTTCTATTCCCTTCCGCGATCGGCCAGGCCCCGGCACAGCCACCAAGCTTGCCAACTGTCTCACCACCGCCTTCCACTCCGCCTCCGACCGCAACAACTCCTCCACCCTTGTCAACACCACCGCCTAATGTTGCACCATCAACAAGCCCAACCATTCCACCACCCCAACCACCACAAAGTTCACCTATCTCAACCCCGTCGCTACCACCAGCATTGCCACCTCCCCCCGCTACGCCTCCGCCATTGCCACCTCCTTTACCACCACCACAAGTCTCTCCAACTCCTTCACAGGCACCACCGGTGCCAGCTCCCACCCTAGCACCATTACCAACTCCGCCAACACCAATGTCGTCACCACCAACGCTAGCACCAGTCGCGGCACCAGAGTTATCCCCTGCACCTGCGCCAGGAAAGCATAAGCGTAGGAGGCATCACAAACATAAGAAGCATCAAGCACCGGCCCCGGCCCCAACCGTCCCAAGCCCACCAGCACCACCTATAGTGGTGGACTCACAAGATAGCACAGCGCCAGCGCCATCACCAAATCTGAATGGAGGAGACCCAATGAAAGGAAAGGTGGGAACATGGACTAGAGTTGTACTGGGATTCATATTTCTAGTTGCTACCACAGGCTTCAAATTCTAATTTTGAAGAGAGAATTATTCACAAGGAACCCATTATGGTTCATAAAATTATAGAATTGGCCCAGAATCTGTTCTCACACAATTGTAAAGGTTCATACTCCACAACATGAGACGGGT

Coding sequence (CDS)

ATGGCTTCCAAATCATGGCCTTTTTTGGTAATTTGCCTTGGCTTTCTATTCCCTTCCGCGATCGGCCAGGCCCCGGCACAGCCACCAAGCTTGCCAACTGTCTCACCACCGCCTTCCACTCCGCCTCCGACCGCAACAACTCCTCCACCCTTGTCAACACCACCGCCTAATGTTGCACCATCAACAAGCCCAACCATTCCACCACCCCAACCACCACAAAGTTCACCTATCTCAACCCCGTCGCTACCACCAGCATTGCCACCTCCCCCCGCTACGCCTCCGCCATTGCCACCTCCTTTACCACCACCACAAGTCTCTCCAACTCCTTCACAGGCACCACCGGTGCCAGCTCCCACCCTAGCACCATTACCAACTCCGCCAACACCAATGTCGTCACCACCAACGCTAGCACCAGTCGCGGCACCAGAGTTATCCCCTGCACCTGCGCCAGGAAAGCATAAGCGTAGGAGGCATCACAAACATAAGAAGCATCAAGCACCGGCCCCGGCCCCAACCGTCCCAAGCCCACCAGCACCACCTATAGTGGTGGACTCACAAGATAGCACAGCGCCAGCGCCATCACCAAATCTGAATGGAGGAGACCCAATGAAAGGAAAGGTGGGAACATGGACTAGAGTTGTACTGGGATTCATATTTCTAGTTGCTACCACAGGCTTCAAATTCTAA

Protein sequence

MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPNVAPSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPTLAPLPTPPTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSPPAPPIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGFKF
Homology
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BLAST of CcUC06G117990 vs. NCBI nr
Match: XP_038875574.1 (lysine-rich arabinogalactan protein 19-like [Benincasa hispida])

HSP 1 Score: 344.4 bits (882), Expect = 7.7e-91
Identity = 206/229 (89.96%), Postives = 210/229 (91.70%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPN-VA 60
           MASKSWPF VICLGFLFP AIGQAP QPP+LPTVSPPPSTPPPT TTPPPLSTPPP  VA
Sbjct: 1   MASKSWPFSVICLGFLFPFAIGQAPVQPPTLPTVSPPPSTPPPTVTTPPPLSTPPPTVVA 60

Query: 61  PSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPT 120
           PSTSPTIPPPQP    PISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPT
Sbjct: 61  PSTSPTIPPPQP----PISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPT 120

Query: 121 LAPLPTPPTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSPPAP 180
           LAPL TPPTPM SPPT AP+A PEL+PAPAPGKHK RRHHKHKKHQAPAPAPTVPSPPAP
Sbjct: 121 LAPLLTPPTPMPSPPTPAPIAVPELAPAPAPGKHKHRRHHKHKKHQAPAPAPTVPSPPAP 180

Query: 181 PIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGFKF 229
           P VVDSQDSTAPAPSPNLNGGDPMKGKV T +RVVLGFIFLVATTGF F
Sbjct: 181 PTVVDSQDSTAPAPSPNLNGGDPMKGKVETCSRVVLGFIFLVATTGFNF 225

[Close]
BLAST of CcUC06G117990 vs. NCBI nr
Match: XP_008457186.2 (PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 2.8e-80
Identity = 193/229 (84.28%), Postives = 198/229 (86.46%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPN-VA 60
           MASK W F VICL FLF SAI QAPAQPPSLPTVSPPPSTPPPT  TPPPLSTPPP  VA
Sbjct: 1   MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60

Query: 61  PSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPT 120
           PSTSP IP   PPQSSP+STPSLPPA PPPPATPPPLPPPLPPPQVSP P   PPV APT
Sbjct: 61  PSTSPAIP---PPQSSPVSTPSLPPAFPPPPATPPPLPPPLPPPQVSPIPLPTPPVLAPT 120

Query: 121 LAPLPTP--PTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSPP 180
           LAPLP P  PTP  SPPT APVA+PELSPAPAPGKHK RR HKHKKHQAPAPAPTVPSPP
Sbjct: 121 LAPLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 180

Query: 181 APPIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGF 227
           APP VVDSQDSTAPAPSP+L+ GDPMKGKVGTWT+V LGFIFLVATTGF
Sbjct: 181 APPTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIFLVATTGF 226

[Close]
BLAST of CcUC06G117990 vs. NCBI nr
Match: KGN61400.1 (hypothetical protein Csa_005957 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 3.6e-80
Identity = 192/229 (83.84%), Postives = 199/229 (86.90%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPN-VA 60
           MASKSW F VICL FLF S+  QAPAQPPSLPTVSPPP+TPPPT  T PPLSTPPP  VA
Sbjct: 15  MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 74

Query: 61  PSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPT 120
           PSTSPTIP   PPQSSP+STPSLPPALPPPPATPPPLPPPLPPPQVSPTP   PPV APT
Sbjct: 75  PSTSPTIP---PPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 134

Query: 121 LA--PLPTPPTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSPP 180
           LA  PLPTPPTP  SPPT APVAAPE SPAPAPGKHK RR HKHKKHQAPAPAPTVPSPP
Sbjct: 135 LAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 194

Query: 181 APPIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGF 227
           APP VVDSQDSTAPAPSP+LNGGDP+K KVG W++V LGFIFLVATTGF
Sbjct: 195 APPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGF 240

[Close]
BLAST of CcUC06G117990 vs. NCBI nr
Match: XP_011649058.1 (lysine-rich arabinogalactan protein 19 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 3.6e-80
Identity = 192/229 (83.84%), Postives = 199/229 (86.90%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPN-VA 60
           MASKSW F VICL FLF S+  QAPAQPPSLPTVSPPP+TPPPT  T PPLSTPPP  VA
Sbjct: 1   MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 60

Query: 61  PSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPT 120
           PSTSPTIP   PPQSSP+STPSLPPALPPPPATPPPLPPPLPPPQVSPTP   PPV APT
Sbjct: 61  PSTSPTIP---PPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 120

Query: 121 LA--PLPTPPTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSPP 180
           LA  PLPTPPTP  SPPT APVAAPE SPAPAPGKHK RR HKHKKHQAPAPAPTVPSPP
Sbjct: 121 LAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 180

Query: 181 APPIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGF 227
           APP VVDSQDSTAPAPSP+LNGGDP+K KVG W++V LGFIFLVATTGF
Sbjct: 181 APPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGF 226

[Close]
BLAST of CcUC06G117990 vs. NCBI nr
Match: XP_022158972.1 (lysine-rich arabinogalactan protein 19 [Momordica charantia])

HSP 1 Score: 298.1 bits (762), Expect = 6.4e-77
Identity = 188/232 (81.03%), Postives = 197/232 (84.91%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPL-STPPPN-V 60
           MASKSWP LVI L FLF  AIGQAPAQPPSLPT S PPST  PT  TPPPL STPPPN V
Sbjct: 1   MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60

Query: 61  APSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAP 120
           APSTSPT+PPPQPPQ +P+STPSLPP LPPPPATPPPLP   PPPQVSPTP+QAP VPAP
Sbjct: 61  APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLP---PPPQVSPTPAQAPSVPAP 120

Query: 121 TLAPLPTPPTPMSSPPTLAPVAAPEL--SPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSP 180
           TLAPLP PP P+  PPT APVAAP L  SPAPAPGKH+ +RHHKHKKH APAPAPT+PSP
Sbjct: 121 TLAPLPNPPAPLPPPPTPAPVAAPVLVPSPAPAPGKHRHKRHHKHKKHPAPAPAPTMPSP 180

Query: 181 PAPPIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGFKF 229
           PAPP VVDSQDSTAPAPSPNLNGGDPM+GKV TWTRVVLGFI LVATT   F
Sbjct: 181 PAPPTVVDSQDSTAPAPSPNLNGGDPMEGKVRTWTRVVLGFIILVATTSLNF 229

[Close]
BLAST of CcUC06G117990 vs. ExPASy Swiss-Prot
Match: Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21
Identity = 110/233 (47.21%), Postives = 130/233 (55.79%), Query Frame = 0 

Query: 19  SAIGQAPAQPPSLPTVSPPPST--PPPTATTPP------------------PLSTPPPNV 78
           S +      PP  PT + PP+T  PPPT TTPP                  P S P P V
Sbjct: 30  SPVTSTTTAPP--PTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKV 89

Query: 79  APSTSPTIPPPQPPQSSPISTPSL--PPALPPP-PATPPPLPPPLPPPQVSPTPSQAPPV 138
           AP  SP  PPPQPPQS P S P++  PP  PPP P +PPP P   PP   SP P+ A P 
Sbjct: 90  APVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPP 149

Query: 139 PAPTLAPLPTPPTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKK-HQAPAPAPTVP 198
           PAP   P    P+P+S PP          +PAPAP KHKR+  HKHK+ H APAPAP  P
Sbjct: 150 PAPVSPPPVQAPSPISLPP----------APAPAPTKHKRK--HKHKRHHHAPAPAPIPP 209

Query: 199 SPPAPPIVVDSQDSTAPAPSPNLNGG---DPMKGKVGTWTRVVLGFIFLVATT 225
           SPP+PP++ D QD TAPAPSPN NGG   + +KG+   W    L  +FL+A T
Sbjct: 210 SPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMT 247

[Close]
BLAST of CcUC06G117990 vs. ExPASy TrEMBL
Match: A0A1S3C506 (lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.3e-80
Identity = 193/229 (84.28%), Postives = 198/229 (86.46%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPN-VA 60
           MASK W F VICL FLF SAI QAPAQPPSLPTVSPPPSTPPPT  TPPPLSTPPP  VA
Sbjct: 1   MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60

Query: 61  PSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPT 120
           PSTSP IP   PPQSSP+STPSLPPA PPPPATPPPLPPPLPPPQVSP P   PPV APT
Sbjct: 61  PSTSPAIP---PPQSSPVSTPSLPPAFPPPPATPPPLPPPLPPPQVSPIPLPTPPVLAPT 120

Query: 121 LAPLPTP--PTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSPP 180
           LAPLP P  PTP  SPPT APVA+PELSPAPAPGKHK RR HKHKKHQAPAPAPTVPSPP
Sbjct: 121 LAPLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 180

Query: 181 APPIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGF 227
           APP VVDSQDSTAPAPSP+L+ GDPMKGKVGTWT+V LGFIFLVATTGF
Sbjct: 181 APPTVVDSQDSTAPAPSPDLSRGDPMKGKVGTWTKVGLGFIFLVATTGF 226

[Close]
BLAST of CcUC06G117990 vs. ExPASy TrEMBL
Match: A0A0A0LHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.7e-80
Identity = 192/229 (83.84%), Postives = 199/229 (86.90%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPN-VA 60
           MASKSW F VICL FLF S+  QAPAQPPSLPTVSPPP+TPPPT  T PPLSTPPP  VA
Sbjct: 15  MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 74

Query: 61  PSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPT 120
           PSTSPTIP   PPQSSP+STPSLPPALPPPPATPPPLPPPLPPPQVSPTP   PPV APT
Sbjct: 75  PSTSPTIP---PPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 134

Query: 121 LA--PLPTPPTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSPP 180
           LA  PLPTPPTP  SPPT APVAAPE SPAPAPGKHK RR HKHKKHQAPAPAPTVPSPP
Sbjct: 135 LAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 194

Query: 181 APPIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGF 227
           APP VVDSQDSTAPAPSP+LNGGDP+K KVG W++V LGFIFLVATTGF
Sbjct: 195 APPTVVDSQDSTAPAPSPDLNGGDPVKRKVGRWSKVGLGFIFLVATTGF 240

[Close]
BLAST of CcUC06G117990 vs. ExPASy TrEMBL
Match: A0A6J1DYJ7 (lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC111025417 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.1e-77
Identity = 188/232 (81.03%), Postives = 197/232 (84.91%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPL-STPPPN-V 60
           MASKSWP LVI L FLF  AIGQAPAQPPSLPT S PPST  PT  TPPPL STPPPN V
Sbjct: 1   MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60

Query: 61  APSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAP 120
           APSTSPT+PPPQPPQ +P+STPSLPP LPPPPATPPPLP   PPPQVSPTP+QAP VPAP
Sbjct: 61  APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLP---PPPQVSPTPAQAPSVPAP 120

Query: 121 TLAPLPTPPTPMSSPPTLAPVAAPEL--SPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSP 180
           TLAPLP PP P+  PPT APVAAP L  SPAPAPGKH+ +RHHKHKKH APAPAPT+PSP
Sbjct: 121 TLAPLPNPPAPLPPPPTPAPVAAPVLVPSPAPAPGKHRHKRHHKHKKHPAPAPAPTMPSP 180

Query: 181 PAPPIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGFKF 229
           PAPP VVDSQDSTAPAPSPNLNGGDPM+GKV TWTRVVLGFI LVATT   F
Sbjct: 181 PAPPTVVDSQDSTAPAPSPNLNGGDPMEGKVRTWTRVVLGFIILVATTSLNF 229

[Close]
BLAST of CcUC06G117990 vs. ExPASy TrEMBL
Match: A0A6J1IGY8 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111472835 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 8.7e-72
Identity = 180/242 (74.38%), Postives = 191/242 (78.93%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPNV-A 60
           MASKS P LVICL FLFP AI QAPAQPPSLPT +PPPSTPPPT T      TPPPNV A
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60

Query: 61  PSTSPTIPPPQPPQSSPISTPSLPPALPPPPATPPPL------PPPLPPPQVSPTPSQAP 120
           PS +PTIPPPQPPQ+ P+STPSLPP LPPPP TPPPL      PPPLPPP  +P P   P
Sbjct: 61  PSITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATP-PPLPP 120

Query: 121 PVPAP-------TLAPLPTPPTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKKHQA 180
           P+PAP        +APLPTPPTP+ S P LAPVA PEL+PAPAPGKHK RR HKHKKHQA
Sbjct: 121 PLPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQA 180

Query: 181 PAPAPTVPSPPAPPIVVDSQDSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGF 229
           PAPAP VPSPPAPP VVDSQDSTAPAPSPNLNGGDPMK KVGTW R+VLGFI +VATT F
Sbjct: 181 PAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKVGTWARIVLGFIIVVATTAF 236

[Close]
BLAST of CcUC06G117990 vs. ExPASy TrEMBL
Match: A0A6J1EVZ4 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111436552 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.3e-70
Identity = 178/240 (74.17%), Postives = 188/240 (78.33%), Query Frame = 0 

Query: 1   MASKSWPFLVICLGFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPNV-A 60
           MASKS   LVICL FLFP AI QAPAQPPSLPT +PPPSTPPPT T      TPPPNV A
Sbjct: 1   MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60

Query: 61  PSTSPTIPPPQPPQSSPISTPSLPPA----------LPPPPATPPPLPPPLPPPQVSPTP 120
           PS +PTIPPPQPPQ+ P+STPSLPP           LPPPPATPPPLPPPLP PQ+SPTP
Sbjct: 61  PSIAPTIPPPQPPQTPPVSTPSLPPVFPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTP 120

Query: 121 SQAPPVPAPTLAPLPTPPTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKKHQAPAP 180
            Q        +APLPTPPTP+ SPP LAPVA PEL+PAPAPGKHK RR HKHKKHQAPAP
Sbjct: 121 LQ--------VAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAP 180

Query: 181 APTVPSPPAPPIVVDSQ-DSTAPAPSPNLNGGDPMKGKVGTWTRVVLGFIFLVATTGFKF 229
           AP VPSPPAPP VVDSQ DSTAPAPSPNLNGGDPMK KVG W RVVLGFI +VA+T F F
Sbjct: 181 APAVPSPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKEKVGRWARVVLGFIIVVASTAFNF 227

[Close]
BLAST of CcUC06G117990 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-22
Identity = 110/233 (47.21%), Postives = 130/233 (55.79%), Query Frame = 0 

Query: 19  SAIGQAPAQPPSLPTVSPPPST--PPPTATTPP------------------PLSTPPPNV 78
           S +      PP  PT + PP+T  PPPT TTPP                  P S P P V
Sbjct: 30  SPVTSTTTAPP--PTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKV 89

Query: 79  APSTSPTIPPPQPPQSSPISTPSL--PPALPPP-PATPPPLPPPLPPPQVSPTPSQAPPV 138
           AP  SP  PPPQPPQS P S P++  PP  PPP P +PPP P   PP   SP P+ A P 
Sbjct: 90  APVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPP 149

Query: 139 PAPTLAPLPTPPTPMSSPPTLAPVAAPELSPAPAPGKHKRRRHHKHKK-HQAPAPAPTVP 198
           PAP   P    P+P+S PP          +PAPAP KHKR+  HKHK+ H APAPAP  P
Sbjct: 150 PAPVSPPPVQAPSPISLPP----------APAPAPTKHKRK--HKHKRHHHAPAPAPIPP 209

Query: 199 SPPAPPIVVDSQDSTAPAPSPNLNGG---DPMKGKVGTWTRVVLGFIFLVATT 225
           SPP+PP++ D QD TAPAPSPN NGG   + +KG+   W    L  +FL+A T
Sbjct: 210 SPPSPPVLTDPQD-TAPAPSPNTNGGNALNQLKGRAVMWLNTGLVILFLLAMT 247

The following BLAST results are available for this feature:
BLAST of CcUC06G117990 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875574.17.7e-9189.96lysine-rich arabinogalactan protein 19-like [Benincasa hispida][more]
XP_008457186.22.8e-8084.28PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo][more]
KGN61400.13.6e-8083.84hypothetical protein Csa_005957 [Cucumis sativus][more]
XP_011649058.13.6e-8083.84lysine-rich arabinogalactan protein 19 [Cucumis sativus][more]
XP_022158972.16.4e-7781.03lysine-rich arabinogalactan protein 19 [Momordica charantia][more]
BLAST of CcUC06G117990 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9S7403.0e-2147.21Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ... [more]
BLAST of CcUC06G117990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C5061.3e-8084.28lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 P... [more]
A0A0A0LHJ41.7e-8083.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1[more]
A0A6J1DYJ73.1e-7781.03lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1IGY88.7e-7274.38lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1EVZ41.3e-7074.17lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
BLAST of CcUC06G117990 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G68725.12.1e-2247.21arabinogalactan protein 19 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..145
NoneNo IPR availablePANTHERPTHR36549:SF3LYSINE-RICH ARABINOGALACTAN PROTEIN 19coord: 1..224
IPR038793Lysine-rich arabinogalactan protein 19PANTHERPTHR36549LYSINE-RICH ARABINOGALACTAN PROTEIN 19coord: 1..224

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G117990.1CcUC06G117990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005886 plasma membrane