Sed0026591 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAATGTGAGTTGGAGAAATTCCAGGTACTTGACTTAGTAGTTCCAAATTTTCTAAAGGGTTTTTGTTTTTTTGGCCATAGGTTGTAGAATTGAAGGTCTATTTGCATTGTGAAGAGTGCATCAAGAAGATTCTAAAAGCCATCAAGAAAATCCAAGGTTTGTGGCTCAATCTCTTCATCAATTTCTCCTCTGTTTTAAGCTTAACAAATCAATGAGTCCTTTGATTATTCTTTTTCTTATTCTCCATTTGCAGATATAGAGACTTATAATGTAGATATGCAGCTGAATAAGGTGATTGTTACAGGCAATGTCACTACAGAACAAGTCATCAAAGTTCTTCAGAAAATTAACAAAACTGCAATTCCATGGCAAGTTGATGAAGTAAATTAG ATGGCTAATGTTGTAGAATTGAAGGTCTATTTGCATTGTGAAGAGTGCATCAAGAAGATTCTAAAAGCCATCAAGAAAATCCAAGATATAGAGACTTATAATGTAGATATGCAGCTGAATAAGGTGATTGTTACAGGCAATGTCACTACAGAACAAGTCATCAAAGTTCTTCAGAAAATTAACAAAACTGCAATTCCATGGCAAGTTGATGAAGTAAATTAG ATGGCTAATGTTGTAGAATTGAAGGTCTATTTGCATTGTGAAGAGTGCATCAAGAAGATTCTAAAAGCCATCAAGAAAATCCAAGATATAGAGACTTATAATGTAGATATGCAGCTGAATAAGGTGATTGTTACAGGCAATGTCACTACAGAACAAGTCATCAAAGTTCTTCAGAAAATTAACAAAACTGCAATTCCATGGCAAGTTGATGAAGTAAATTAG MANVVELKVYLHCEECIKKILKAIKKIQDIETYNVDMQLNKVIVTGNVTTEQVIKVLQKINKTAIPWQVDEVN Homology
BLAST of Sed0026591 vs. NCBI nr
Match: XP_004138408.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus]) HSP 1 Score: 129.8 bits (325), Expect = 9.6e-27 Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Sed0026591 vs. NCBI nr
Match: XP_008456748.1 (PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo]) HSP 1 Score: 128.3 bits (321), Expect = 2.8e-26 Identity = 63/73 (86.30%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Sed0026591 vs. NCBI nr
Match: XP_038884077.1 (copper transport protein ATX1 [Benincasa hispida]) HSP 1 Score: 127.9 bits (320), Expect = 3.6e-26 Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Sed0026591 vs. NCBI nr
Match: XP_022133451.1 (copper transport protein ATX1 [Momordica charantia]) HSP 1 Score: 126.7 bits (317), Expect = 8.1e-26 Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 0
BLAST of Sed0026591 vs. NCBI nr
Match: KAE8646572.1 (hypothetical protein Csa_004951, partial [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 6.9e-25 Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.0e-06 Identity = 25/65 (38.46%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 1.7e-05 Identity = 27/67 (40.30%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 2.2e-05 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 6.3e-05 Identity = 23/70 (32.86%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 8.2e-05 Identity = 26/64 (40.62%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy TrEMBL
Match: A0A0A0K8N1 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013360 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.6e-27 Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy TrEMBL
Match: A0A1S3C423 (superoxide dismutase 1 copper chaperone OS=Cucumis melo OX=3656 GN=LOC103496596 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26 Identity = 63/73 (86.30%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy TrEMBL
Match: A0A6J1BV52 (copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111006024 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.9e-26 Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy TrEMBL
Match: A0A5D3C2A2 (Superoxide dismutase 1 copper chaperone OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001360 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 9.7e-25 Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Sed0026591 vs. ExPASy TrEMBL
Match: A0A2N9J4M6 (HMA domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60308 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 6.9e-23 Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of Sed0026591 vs. TAIR 10
Match: AT5G05365.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 1.4e-23 Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of Sed0026591 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 1.4e-07 Identity = 25/65 (38.46%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Sed0026591 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.2e-06 Identity = 27/67 (40.30%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of Sed0026591 vs. TAIR 10
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 49.3 bits (116), Expect = 1.5e-06 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of Sed0026591 vs. TAIR 10
Match: AT5G19090.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 49.3 bits (116), Expect = 1.5e-06 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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