Sed0018469 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCAATGACGAGTTGTTCGAGATGCTAAATCAACGCTCTCCCGAGGTAATCATCTTCATCGATCCAATTTGTTTTGATCGATTTTCAGTTGTTTTTGTTGTTTTTGTGCGTTTTTCTTCTATCTGATTCTTCCTTCTTTGTTGAATATCTGCATCTTAGATTTGTTTCTGATGAGAAATGCGATACTCTCTTTTGCGTTCGGTGTTTGATTTGATCGATTATGAGTCATTTGTGTATTTTCTCTGTGTTTTTCTTCTATCTGATTTTTCCTTCTTCGTTGAATTTCTCATCAGATGCATCTTACATTTGCTTCTGATGAGAAATATGATTCTCTCTTTTGCGCTTGATTTTTGTATTGATGATCGATTACGAGCCGTTTGTGTGATTTTTATGTGTTTTTCTTCTCTCTGATTCTCCATTCTTTGTTAAATGTCTGCATGAGGTTGAAATGGAATCCTCTCTTTTGATGCAATGCGGCCATGGTCGCATAACCGTATCAGGATTTCACAGTTTCTTCTGTGAATTTTGAAGAGAGACCGATTTGTTAACAGTTGTTTTCAAAATTAGTTTCATTCATGGGAGCTAATGCGTTGAGATTGAAATATCTTTTTGCGATTTTGAAAGATAATTTTAGCGAACGTGTGTTTGTGATTTTCTCCCTTGGAAAACATTACGATTTTATTCTAATAGTTTCCAAAATGATCATTGGTTTCAGTTTCTCATCGCTATTTCATAAATAGATCAAAGTTAGTTTTCATTTTTCATTATCTCTCAGGATAAAATTACTTGTTCGTATTGACAATTTCGTCCTATATCTTGCTCATTTCTCCTCTATGTTTCTGATCAAAAGATTTGGATTTTACCGAAGGAAGTTATCTCTGACGATGGCGATTGCAGCTGTATTCATTCATGTTCATCCGATCGCGACAAATGAAAATTTAGTTCATTCTCTTATCGATTCCTATGAAAAAAAATGTCTCCTCTATGTTTCAAATGGAGGGTATCAGAGAATGAGCATAGCACACCTGAATACCTCCCTAAAGGATGAATATTCAAATCCTCGTTTTTGTAAAACTAGTTGAAAAAGTAAGAAAAACAATAATAAGATAAAATAACAACAATGGAGGAATTGACCTAGGATATTGGTTTGATTTTATTTAACATTATTCATTTTTTTCCTCGTACTTGAAAAAAACATACTTTCTTTGTGTTTGAAGGTCTGTTAATTGTTACCCCACTTGTAAGTTCAATATACCAATGAGAAATTCGTTGGATTTTAGGATAGAAAAGTCTTACATGTAGTCTTGACTGATATATATCCTGCAACTTTACAGGTGTCCTGTGTGGAAACAACCTTAATTTTTCAGACAGAGATTCGATTTTGCATTTTCAATGGGAAACTGCTGGACTAAGGTATTGGTGGAAATTCATTTCTTTTCTCTTTTTCTTTTCCTTTTATTGTATGTTTTCAAGGTCTTGTATTGGATTTCTATACCACTCTCTGCTTTAATTTGTTTGCCAGGCCCGCAGTTTCTGGTATGTCCTTTGCACATTTTGTTTTTATTCATCATTGTTCATCTTGGGTCCACTTAAGACATAACTAAGTGGAGGTTTGAAAAAAAAATAACCTTTTGCCTCTGTGGATTCTTACTTGTTCAGAATCATGAAAGTCCACTAAATTTTAGAGAATCAAATTTTCTCCCTTTGAATATCATATCTGAACTCTCTTTTTCACATAGATTTTTTTAATAAATCTACTTTTAGGAGATTTATTCTGAAATTCTTATCTGAAGTGCCACTTTTCCATGTCTGCTAATGCTTAAAGTTGACTTATTCCACTTTCCTCATTTACATGATGTTAATGTTAGAACCCCTTAGATGATAGGTTTGGAGTGTTAATGTCCAGGTGGTGGCTCTCATCCTTGATACCCAATGAAAAGTTAATGAATGTGATCCTATCCTGATTATTAGATGTATGATTAAACTTGCGCCTAAACAAATAATTGACAAGTAAAGAATATAGAAGGAAGAGAAGATCAACACAAGAATTTACGTGATTCTTTAACAAAATGTTAGCTACGTCCATGAGCAAGAGACAAATCCTTCTATTAAGGAGCAATATAAAATGCATAATACATAGATAGGATTTAAGAGGATTTATATTTATTATCTACTTTAAACAGAAAATACTCAAACACAAAGTCCAAAACGAAATTAAATAATAATCTCCATATAACTTAAGTTCTGGGGGTGTTGCCTAGGATTCTTTCAGGGTGACATTGCCCCCCAAACTCCGTGCTTGATCATTCAAAGCTCCAAACAACAGATTTAATGCATTTCAACCTTCTCGAATAACTTCTGTCTTCTAAGCGAGTTGCATCCACCTTGACATTTTGCAGTTTTTCAATCGTGACCAAGAAGCCTATGCTGAAGTCCAGAATATTGATAGCAAAAACGTACATCTTATTACGTCGATGGAGAAGTGGGAGACGAAGCTGTCGGAATCAACCAAAGAGGGCAAGATTGTAAGTATTACTTCTTCCATGTAAGGATGATAAATAAGTTTCTAGTTCAGTTATTCATCTTTAGAAGTCAATATTCAAGCAAGGTCTTCTAGTTCACTTATTCATTGTGTTCTGCATTTAACAAATTCTGGATGTTTTATCTTATATAACTGAATCTTGAAGATAAAAAAAATAAACAGAGGGTATAATTGTTTTAACTTAAAACTATTCAACAGGTGATTGCAAATTTCAGTGCATCATGGTGTAGACCTTGTAAATCCATGACGCCAACATATTGTGACCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGATGTCGACGAGCTGGCTGTAAGTAAAAACACACACTTTTTGTTTACCATTCGTTTGTTTCGTTTATATAAATTCATGTTTTTAGAGGCATATCTAGCTTGCACTCTAGAGTTCTATTTAGCCGCGACTTTACAATTTGATTTTAACCGCTTTTGTTTCTTATTTCTTGACTCGTTTTCTATTATTGATTATGGAAAAGAAACAAAAAGAATTTTTAGTTTAATTATATCTATGTGACTGTCTGCGCCAGCTTGCAAAATTTTTTTGGGAGCATTTATAGCCAAATGCTGCTAAATGCTTGGATTTTCTAAATTTTGGAGCGTTTGTGACAAAACGAATTCAGTTGATTGCTTTGAATTGTGAATTGAATGGATGTTTGTTTTACATTGATATCGAACGATCTTGTCTCCTTACAGGAGCTCAGTAAATCGTGGGACATCCAAGCGACTCCAACATTCGTATTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGAAAGATCTACAACAAAAGGTAGCTGCAATGGATGAATCCATAATCAAATCTCAGAGTTCTTAA TCAATGACGAGTTGTTCGAGATGCTAAATCAACGCTCTCCCGAGGTGTCCTGTGTGGAAACAACCTTAATTTTTCAGACAGAGATTCGATTTTGCATTTTCAATGGGAAACTGCTGGACTAAGTTTTTCAATCGTGACCAAGAAGCCTATGCTGAAGTCCAGAATATTGATAGCAAAAACGTACATCTTATTACGTCGATGGAGAAGTGGGAGACGAAGCTGTCGGAATCAACCAAAGAGGGCAAGATTGTGATTGCAAATTTCAGTGCATCATGGTGTAGACCTTGTAAATCCATGACGCCAACATATTGTGACCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGATGTCGACGAGCTGGCTGAGCTCAGTAAATCGTGGGACATCCAAGCGACTCCAACATTCGTATTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGAAAGATCTACAACAAAAGGTAGCTGCAATGGATGAATCCATAATCAAATCTCAGAGTTCTTAA ATGGGAAACTGCTGGACTAAGTTTTTCAATCGTGACCAAGAAGCCTATGCTGAAGTCCAGAATATTGATAGCAAAAACGTACATCTTATTACGTCGATGGAGAAGTGGGAGACGAAGCTGTCGGAATCAACCAAAGAGGGCAAGATTGTGATTGCAAATTTCAGTGCATCATGGTGTAGACCTTGTAAATCCATGACGCCAACATATTGTGACCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGATGTCGACGAGCTGGCTGAGCTCAGTAAATCGTGGGACATCCAAGCGACTCCAACATTCGTATTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGAAAGATCTACAACAAAAGGTAGCTGCAATGGATGAATCCATAATCAAATCTCAGAGTTCTTAA MGNCWTKFFNRDQEAYAEVQNIDSKNVHLITSMEKWETKLSESTKEGKIVIANFSASWCRPCKSMTPTYCDLADKYTSMVFLAIDVDELAELSKSWDIQATPTFVFFKDGRQVDKLVGADKKDLQQKVAAMDESIIKSQSS Homology
BLAST of Sed0018469 vs. NCBI nr
Match: XP_038890472.1 (thioredoxin H4-1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65 Identity = 124/140 (88.57%), Postives = 131/140 (93.57%), Query Frame = 0
BLAST of Sed0018469 vs. NCBI nr
Match: XP_004141512.2 (thioredoxin H4-1 isoform X1 [Cucumis sativus] >KGN52589.1 hypothetical protein Csa_008226 [Cucumis sativus]) HSP 1 Score: 247.7 bits (631), Expect = 6.1e-62 Identity = 117/134 (87.31%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of Sed0018469 vs. NCBI nr
Match: XP_008459484.1 (PREDICTED: thioredoxin H-type [Cucumis melo]) HSP 1 Score: 245.4 bits (625), Expect = 3.0e-61 Identity = 116/134 (86.57%), Postives = 123/134 (91.79%), Query Frame = 0
BLAST of Sed0018469 vs. NCBI nr
Match: KAG6602571.1 (hypothetical protein SDJN03_07804, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 245.4 bits (625), Expect = 3.0e-61 Identity = 116/135 (85.93%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of Sed0018469 vs. NCBI nr
Match: KAG7033249.1 (hypothetical protein SDJN02_07303, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 245.4 bits (625), Expect = 3.0e-61 Identity = 116/135 (85.93%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 3.0e-35 Identity = 71/137 (51.82%), Postives = 103/137 (75.18%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.9e-34 Identity = 69/140 (49.29%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 5.6e-34 Identity = 71/136 (52.21%), Postives = 96/136 (70.59%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.3e-32 Identity = 67/133 (50.38%), Postives = 92/133 (69.17%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy Swiss-Prot
Match: Q9LXZ8 (Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2) HSP 1 Score: 137.9 bits (346), Expect = 8.9e-32 Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy TrEMBL
Match: A0A0A0KUM3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.0e-62 Identity = 117/134 (87.31%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy TrEMBL
Match: A0A1S3CBI4 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61 Identity = 116/134 (86.57%), Postives = 123/134 (91.79%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy TrEMBL
Match: A0A6J1H8J4 (thioredoxin H4-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461044 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61 Identity = 116/134 (86.57%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy TrEMBL
Match: A0A6J1JH67 (thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 4.3e-61 Identity = 118/141 (83.69%), Postives = 127/141 (90.07%), Query Frame = 0
BLAST of Sed0018469 vs. ExPASy TrEMBL
Match: A0A6J1JRL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 8.9e-59 Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = 0
BLAST of Sed0018469 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 ) HSP 1 Score: 146.7 bits (369), Expect = 1.4e-35 Identity = 69/140 (49.29%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of Sed0018469 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 ) HSP 1 Score: 146.7 bits (369), Expect = 1.4e-35 Identity = 69/140 (49.29%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of Sed0018469 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein ) HSP 1 Score: 137.9 bits (346), Expect = 6.3e-33 Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 0
BLAST of Sed0018469 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 ) HSP 1 Score: 134.8 bits (338), Expect = 5.4e-32 Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 0
BLAST of Sed0018469 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin ) HSP 1 Score: 104.4 bits (259), Expect = 7.8e-23 Identity = 47/124 (37.90%), Postives = 83/124 (66.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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