Cla97C09G183900 (gene) Watermelon (97103) v2.5

Overview
NameCla97C09G183900
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr09: 37059029 .. 37060157 (-)
RNA-Seq ExpressionCla97C09G183900
SyntenyCla97C09G183900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTTGAAGCCATTAAATCGGAGGCAAGTGGCTGCCAAAGCCACTCCATTCGGGACGATTTGGCATCGGTGATGAGCGTTGGAGGAGAAGCGAATGTTGAAGATCAAGAAATTGAAGACGATGTCGATACAAGAACAAGAGTAGGAAAACGCTGTAAATTTGAGAAGAATGTTGAATATCGAGAAGCGATGGAGGAGATTGGCTAATGTGAAGAACAAGGCAAGTCTGAAGGAAAATGAAAAGTTGACATATCTCTAGAAGAGTAACGAGGACAACCTCAAGCAAAAGTAAAAGGCGTCTGGTCTAATCTCTTGGAGATGGAAATTTTTTACACTTGGCTGGATGAACCTTGTGGAGCTCTACAGGTACGCTTCTTCATGAGATGATTTTTACACTATCAAGTTTGCTTATAGGCTTATAGCTTCTGCATTTAACTAAAATTATGAGCATCTCTAGTTATTGTTTCATCTTTCAGTCCTTTTGGTTTTCTGATCTGATATCCATAAGATGATTTTTACGTTATCAAGTATGCTTATATGCTTATAGTTTCTGCTTTGAACTAAAATTATGAGCATCTCTAGTAATTGTTCATCTTTTAGTCCTTTTGGTTATCTGATCTGATATCCTGTAAAAACCTGCTATAGAGTGTTCCAGGGAAAAAACGGGATAGACATTAAGAATTTTAGTATGATTATATATGTTTTGAGATTTTAATGACTTGCTTCAAAACAGGATTGAGTCTCCTAGGTTAGTGAGTAAATGAATGTAAGTGAATTGGGAAATAACTACTTGAAGTTCAATTCCGAGGTACATTGTTATTGTCTAGTTTCTTCTAAAATTATAAAATCTTAAGCCAACCACACCAATGCACCAAACAGTCCTCAATAAATACAGAATTGTAAGGATAGCTCCGGGGGGAATTTTGTACCGGGTTTCGCCAATGAACAGATGTAGGCTTAGTCCTTTAGATAGTTTGATTAATTGTTCTATTTGTCAACAGTGGTGTTCAGATTTCTATCGCTTTTCTTTTGTTCTCCTTTCCAAAGCCATGAGGCAGAGATCCCTGCCTTAACTCTTAAGCATTTTGCAAGTCTTTCAAGTCACATATGGACTAGTCTAGACTAG

mRNA sequence

ATGACATTTGAAGCCATTAAATCGGAGGCAAGTGGCTGCCAAAGCCACTCCATTCGGGACGATTTGGCATCGGTGATGAGCGTTGGAGGAGAAGCGAATGTTGAAGATCAAGAAATTGAAGACGATGTCGATACAAGAACAAGAGTAGGAAAACGCTTGGTGTTCAGATTTCTATCGCTTTTCTTTTGTTCTCCTTTCCAAAGCCATGAGGCAGAGATCCCTGCCTTAACTCTTAAGCATTTTGCAAGTCTTTCAAGTCACATATGGACTAGTCTAGACTAG

Coding sequence (CDS)

ATGACATTTGAAGCCATTAAATCGGAGGCAAGTGGCTGCCAAAGCCACTCCATTCGGGACGATTTGGCATCGGTGATGAGCGTTGGAGGAGAAGCGAATGTTGAAGATCAAGAAATTGAAGACGATGTCGATACAAGAACAAGAGTAGGAAAACGCTTGGTGTTCAGATTTCTATCGCTTTTCTTTTGTTCTCCTTTCCAAAGCCATGAGGCAGAGATCCCTGCCTTAACTCTTAAGCATTTTGCAAGTCTTTCAAGTCACATATGGACTAGTCTAGACTAG

Protein sequence

MTFEAIKSEASGCQSHSIRDDLASVMSVGGEANVEDQEIEDDVDTRTRVGKRLVFRFLSLFFCSPFQSHEAEIPALTLKHFASLSSHIWTSLD
Homology
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BLAST of Cla97C09G183900 vs. NCBI nr
Match: KAE8647351.1 (hypothetical protein Csa_004301 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-05
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0 

Query: 1  MTFEAIKSEAS---GCQSHSIRDDLASVMSVGGEANVEDQEIEDDVDT 46
          MTFEAIK E S     +++S RDDLASVMS+GGEANVE QE EDDVDT
Sbjct: 14 MTFEAIKLEFSRLLTAKANSNRDDLASVMSIGGEANVEAQETEDDVDT 61

The following BLAST results are available for this feature:
BLAST of Cla97C09G183900 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647351.11.6e-0570.83hypothetical protein Csa_004301 [Cucumis sativus][more]
BLAST of Cla97C09G183900 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C09G183900 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C09G183900 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G183900.2Cla97C09G183900.2mRNA