Homology
BLAST of Sed0005093 vs. NCBI nr
Match:
XP_022939932.1 (chlorophyll a-b binding protein 6A, chloroplastic-like [Cucurbita moschata] >XP_022993029.1 chlorophyll a-b binding protein 6A, chloroplastic-like [Cucurbita maxima] >KAG6578757.1 Chlorophyll a-b binding protein 6A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 474.9 bits (1221), Expect = 4.1e-130
Identity = 233/248 (93.95%), Postives = 239/248 (96.37%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA+ +P GVA NASSRFSMSAEWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFAT-GVPISGVAVNASSRFSMSAEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD+EKKKYPGGAFDPLG
Sbjct: 121 EWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDPVKLKEYKVKE+KNGRLALLAFVGICVQQ+AYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPVKLKEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFSP 249
IIP S SP
Sbjct: 241 IIPRSISP 246
BLAST of Sed0005093 vs. NCBI nr
Match:
XP_038891246.1 (chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida])
HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129
Identity = 234/248 (94.35%), Postives = 237/248 (95.56%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P GVA NASSRFSMSAEWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFA-AAVPISGVAVNASSRFSMSAEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGS+PGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSSPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLG
Sbjct: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDP KLKEYKVKE+KNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFSP 249
IIP S SP
Sbjct: 241 IIPRSISP 246
BLAST of Sed0005093 vs. NCBI nr
Match:
XP_022133484.1 (chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia])
HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-129
Identity = 233/248 (93.95%), Postives = 237/248 (95.56%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P GV ANASSRFSMSAEWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFA-AAVPISGVGANASSRFSMSAEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLG
Sbjct: 121 EWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDP KLKEYKVKE+KNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFSP 249
IIP + SP
Sbjct: 241 IIPRNISP 246
BLAST of Sed0005093 vs. NCBI nr
Match:
XP_023549541.1 (chlorophyll a-b binding protein 6A, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 472.6 bits (1215), Expect = 2.0e-129
Identity = 232/247 (93.93%), Postives = 238/247 (96.36%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA+ +P GVA NASSRFSMSAEWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFAT-GVPISGVAVNASSRFSMSAEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD+EKKKYPGGAFDPLG
Sbjct: 121 EWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDPVKLKEYKVKE+KNGRLALLAFVGICVQQ+AYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPVKLKEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFS 248
IIP S S
Sbjct: 241 IIPRSIS 245
BLAST of Sed0005093 vs. NCBI nr
Match:
XP_008453995.1 (PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo] >KAA0048040.1 chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa])
HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-129
Identity = 232/248 (93.55%), Postives = 237/248 (95.56%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P GVA NASSRFSMS+EWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFA-AAVPISGVAVNASSRFSMSSEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLG
Sbjct: 121 EWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDP KLKEYKVKE+KNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFSP 249
IIP + SP
Sbjct: 241 IIPRTISP 246
BLAST of Sed0005093 vs. ExPASy Swiss-Prot
Match:
P12360 (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB6A PE=2 SV=1)
HSP 1 Score: 424.5 bits (1090), Expect = 8.4e-118
Identity = 211/248 (85.08%), Postives = 219/248 (88.31%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI A PS LSS+KSKFA AA+P A N SRFSMSA+WMPGQPRP
Sbjct: 1 MASNTLMSCGIPAVC--PSFLSSTKSKFA-AAMPVYVGATNFMSRFSMSADWMPGQPRPS 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFD L LGEVP NLER+KESELIHCRWAMLAVPGI+VPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAAIPGGQATYLGQPVPWGTLPTIL IEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG
Sbjct: 121 EWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDP K +E KVKE+KNGRLALLA VG CVQQSAY GTGPLENLATHLADPWHNNIGD+
Sbjct: 181 YSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGDV 240
Query: 241 IIPPSFSP 249
IIP P
Sbjct: 241 IIPKGIFP 245
BLAST of Sed0005093 vs. ExPASy Swiss-Prot
Match:
Q01667 (Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA1 PE=1 SV=1)
HSP 1 Score: 422.9 bits (1086), Expect = 2.4e-117
Identity = 206/243 (84.77%), Postives = 217/243 (89.30%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASN+LMSCGIA A +PS+LSSSKSKF SA +P P A R M+A WMPG+PRP
Sbjct: 1 MASNSLMSCGIA--AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPA 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLG
Sbjct: 121 EWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDP KL+E KVKE+KNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 239
Query: 241 IIP 244
+IP
Sbjct: 241 VIP 239
BLAST of Sed0005093 vs. ExPASy Swiss-Prot
Match:
Q9SDM1 (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare OX=4513 GN=LHC Ib-21 PE=1 SV=1)
HSP 1 Score: 371.7 bits (953), Expect = 6.5e-102
Identity = 180/242 (74.38%), Postives = 200/242 (82.64%), Query Frame = 0
Query: 2 ASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPPY 61
+S+ L SC + PS+L+ S S+ + LPF A S R +MSAEW PGQPRP +
Sbjct: 3 SSSGLRSC---SAVGVPSLLAPS-SRSGRSGLPFCAY-ATTSGRVTMSAEWFPGQPRPAH 62
Query: 62 LDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 121
LDGS+PGDFGFDPL L VPEN ERFKESE+ HCRWAML VPG+LVPEALGLGNWVKAQE
Sbjct: 63 LDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQE 122
Query: 122 WAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGY 181
WAA+P GQATYLG PVPWG LPTIL IEFLAIAF E QR+MEKD EKKKYPGGAFDPLG+
Sbjct: 123 WAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGF 182
Query: 182 SKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDII 241
SKDP K +E K+KE+KNGRLA+LAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI+
Sbjct: 183 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 239
Query: 242 IP 244
IP
Sbjct: 243 IP 239
BLAST of Sed0005093 vs. ExPASy Swiss-Prot
Match:
Q9XF88 (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.2 PE=1 SV=1)
HSP 1 Score: 157.9 bits (398), Expect = 1.5e-37
Identity = 104/268 (38.81%), Postives = 140/268 (52.24%), Query Frame = 0
Query: 19 SVLSSSKSKFASAALPFPGVAAN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL 78
S +SS+ S+F +A F A+ A + S W PG P YLDGS GD+GFDP
Sbjct: 20 SDISSNSSRF-TARFGFGTKKASPKKAKTVISDRPLWFPGAKSPEYLDGSLVGDYGFDPF 79
Query: 79 RLGEVPE-------------------------------------------NLERFKESEL 138
LG+ E L+RF+E EL
Sbjct: 80 GLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECEL 139
Query: 139 IHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA 198
IH RWAMLA G + E L W A + + G ++YLGQP+P+ ++ T++ IE L
Sbjct: 140 IHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDG--SSYLGQPLPF-SISTLIWIEVLV 199
Query: 199 IAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPVKLKEYKVKEVKNGRLALLAFVGICV 240
I ++E QR+ E DSEK+ YPGG FDPLG + DPVK + ++ E+K+ RLA++ F+G V
Sbjct: 200 IGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAV 259
BLAST of Sed0005093 vs. ExPASy Swiss-Prot
Match:
Q07473 (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.1 PE=1 SV=1)
HSP 1 Score: 156.4 bits (394), Expect = 4.3e-37
Identity = 93/232 (40.09%), Postives = 124/232 (53.45%), Query Frame = 0
Query: 52 WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE----------------------------- 111
W PG P +LDGS GD+GFDP LG+ E
Sbjct: 58 WYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAA 117
Query: 112 --------------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGG 171
++RF+E ELIH RWAMLA G L E L W A + + G
Sbjct: 118 DAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDG- 177
Query: 172 QATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPVK 231
++YLGQP+P+ ++ T++ IE L I ++E QR+ E DSEK+ YPGG FDPLG + DP K
Sbjct: 178 -SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEK 237
Query: 232 LKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGD 240
+ ++ E+K+ RLA++AF+G VQ +A G GPL N ATHL+DP H I D
Sbjct: 238 TAQLQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIID 285
BLAST of Sed0005093 vs. ExPASy TrEMBL
Match:
A0A6J1JZ33 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489171 PE=3 SV=1)
HSP 1 Score: 474.9 bits (1221), Expect = 2.0e-130
Identity = 233/248 (93.95%), Postives = 239/248 (96.37%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA+ +P GVA NASSRFSMSAEWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFAT-GVPISGVAVNASSRFSMSAEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD+EKKKYPGGAFDPLG
Sbjct: 121 EWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDPVKLKEYKVKE+KNGRLALLAFVGICVQQ+AYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPVKLKEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFSP 249
IIP S SP
Sbjct: 241 IIPRSISP 246
BLAST of Sed0005093 vs. ExPASy TrEMBL
Match:
A0A6J1FI72 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445650 PE=3 SV=1)
HSP 1 Score: 474.9 bits (1221), Expect = 2.0e-130
Identity = 233/248 (93.95%), Postives = 239/248 (96.37%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA+ +P GVA NASSRFSMSAEWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFAT-GVPISGVAVNASSRFSMSAEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD+EKKKYPGGAFDPLG
Sbjct: 121 EWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDPVKLKEYKVKE+KNGRLALLAFVGICVQQ+AYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPVKLKEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFSP 249
IIP S SP
Sbjct: 241 IIPRSISP 246
BLAST of Sed0005093 vs. ExPASy TrEMBL
Match:
A0A6J1BW39 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006054 PE=3 SV=1)
HSP 1 Score: 473.0 bits (1216), Expect = 7.6e-130
Identity = 233/248 (93.95%), Postives = 237/248 (95.56%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P GV ANASSRFSMSAEWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFA-AAVPISGVGANASSRFSMSAEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLG
Sbjct: 121 EWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDP KLKEYKVKE+KNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFSP 249
IIP + SP
Sbjct: 241 IIPRNISP 246
BLAST of Sed0005093 vs. ExPASy TrEMBL
Match:
A0A5A7TXV7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001080 PE=3 SV=1)
HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 232/248 (93.55%), Postives = 237/248 (95.56%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P GVA NASSRFSMS+EWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFA-AAVPISGVAVNASSRFSMSSEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLG
Sbjct: 121 EWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDP KLKEYKVKE+KNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFSP 249
IIP + SP
Sbjct: 241 IIPRTISP 246
BLAST of Sed0005093 vs. ExPASy TrEMBL
Match:
A0A1S3BYE0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494548 PE=3 SV=1)
HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 232/248 (93.55%), Postives = 237/248 (95.56%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASNTLMSCGI AT AFPSVLSSSKSKFA AA+P GVA NASSRFSMS+EWMPGQPRPP
Sbjct: 1 MASNTLMSCGI-ATTAFPSVLSSSKSKFA-AAVPISGVAVNASSRFSMSSEWMPGQPRPP 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLG
Sbjct: 121 EWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDP KLKEYKVKE+KNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
Query: 241 IIPPSFSP 249
IIP + SP
Sbjct: 241 IIPRTISP 246
BLAST of Sed0005093 vs. TAIR 10
Match:
AT3G54890.1 (photosystem I light harvesting complex gene 1 )
HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-118
Identity = 206/243 (84.77%), Postives = 217/243 (89.30%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASN+LMSCGIA A +PS+LSSSKSKF SA +P P A R M+A WMPG+PRP
Sbjct: 1 MASNSLMSCGIA--AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPA 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLG
Sbjct: 121 EWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
YSKDP KL+E KVKE+KNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 YSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 239
Query: 241 IIP 244
+IP
Sbjct: 241 VIP 239
BLAST of Sed0005093 vs. TAIR 10
Match:
AT3G54890.2 (photosystem I light harvesting complex gene 1 )
HSP 1 Score: 341.7 bits (875), Expect = 5.1e-94
Identity = 175/243 (72.02%), Postives = 185/243 (76.13%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASN+LMSCGIA A +PS+LSSSKSKF SA +P P A R M+A WMPG+PRP
Sbjct: 1 MASNSLMSCGIA--AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPA 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF
Sbjct: 121 EWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAF------------------------- 180
Query: 181 YSKDPVKLKEYKVKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDI 240
E KVKE+KNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI
Sbjct: 181 ---------ELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 205
Query: 241 IIP 244
+IP
Sbjct: 241 VIP 205
BLAST of Sed0005093 vs. TAIR 10
Match:
AT3G54890.4 (photosystem I light harvesting complex gene 1 )
HSP 1 Score: 332.4 bits (851), Expect = 3.1e-91
Identity = 164/200 (82.00%), Postives = 175/200 (87.50%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASN+LMSCGIA A +PS+LSSSKSKF SA +P P A R M+A WMPG+PRP
Sbjct: 1 MASNSLMSCGIA--AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPA 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLG 180
EWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLG
Sbjct: 121 EWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLG 180
Query: 181 YSKDPVKLKEYKVKEVKNGR 201
YSKDP KL+E KVKE+KNG+
Sbjct: 181 YSKDPKKLEELKVKEIKNGK 196
BLAST of Sed0005093 vs. TAIR 10
Match:
AT3G54890.3 (photosystem I light harvesting complex gene 1 )
HSP 1 Score: 245.0 bits (624), Expect = 6.5e-65
Identity = 122/152 (80.26%), Postives = 130/152 (85.53%), Query Frame = 0
Query: 1 MASNTLMSCGIAATAAFPSVLSSSKSKFASAALPFPGVAANASSRFSMSAEWMPGQPRPP 60
MASN+LMSCGIA A +PS+LSSSKSKF SA +P P A R M+A WMPG+PRP
Sbjct: 1 MASNSLMSCGIA--AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPA 60
Query: 61 YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 120
YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQ
Sbjct: 61 YLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQ 120
Query: 121 EWAAIPGGQATYLGQPVPWGTLPTILVIEFLA 153
EWAA+PGGQATYLG PVPWGTLPTIL IEFLA
Sbjct: 121 EWAALPGGQATYLGNPVPWGTLPTILAIEFLA 148
BLAST of Sed0005093 vs. TAIR 10
Match:
AT3G08940.2 (light harvesting complex photosystem II )
HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 104/268 (38.81%), Postives = 140/268 (52.24%), Query Frame = 0
Query: 19 SVLSSSKSKFASAALPFPGVAAN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL 78
S +SS+ S+F +A F A+ A + S W PG P YLDGS GD+GFDP
Sbjct: 20 SDISSNSSRF-TARFGFGTKKASPKKAKTVISDRPLWFPGAKSPEYLDGSLVGDYGFDPF 79
Query: 79 RLGEVPE-------------------------------------------NLERFKESEL 138
LG+ E L+RF+E EL
Sbjct: 80 GLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECEL 139
Query: 139 IHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA 198
IH RWAMLA G + E L W A + + G ++YLGQP+P+ ++ T++ IE L
Sbjct: 140 IHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDG--SSYLGQPLPF-SISTLIWIEVLV 199
Query: 199 IAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPVKLKEYKVKEVKNGRLALLAFVGICV 240
I ++E QR+ E DSEK+ YPGG FDPLG + DPVK + ++ E+K+ RLA++ F+G V
Sbjct: 200 IGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAV 259
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022939932.1 | 4.1e-130 | 93.95 | chlorophyll a-b binding protein 6A, chloroplastic-like [Cucurbita moschata] >XP_... | [more] |
XP_038891246.1 | 1.2e-129 | 94.35 | chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida] | [more] |
XP_022133484.1 | 1.6e-129 | 93.95 | chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia] | [more] |
XP_023549541.1 | 2.0e-129 | 93.93 | chlorophyll a-b binding protein 6A, chloroplastic-like isoform X1 [Cucurbita pep... | [more] |
XP_008453995.1 | 3.5e-129 | 93.55 | PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo] >KAA... | [more] |
Match Name | E-value | Identity | Description | |
P12360 | 8.4e-118 | 85.08 | Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum OX=408... | [more] |
Q01667 | 2.4e-117 | 84.77 | Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702... | [more] |
Q9SDM1 | 6.5e-102 | 74.38 | Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare OX=4513 ... | [more] |
Q9XF88 | 1.5e-37 | 38.81 | Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX... | [more] |
Q07473 | 4.3e-37 | 40.09 | Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JZ33 | 2.0e-130 | 93.95 | Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
A0A6J1FI72 | 2.0e-130 | 93.95 | Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A6J1BW39 | 7.6e-130 | 93.95 | Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN... | [more] |
A0A5A7TXV7 | 1.7e-129 | 93.55 | Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11... | [more] |
A0A1S3BYE0 | 1.7e-129 | 93.55 | Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103... | [more] |