CmUC03G054900 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAGTCCCAGCCAGTTGCCGGTGCAGCACACGAACACGCCAGACCAGCGCCCAACCAAGCGCCATCACTCGGCACGATACTACGCGCACCGCGTCAAGGAGAGCCTCACAACGCGCGTCTCAAAGCTCATATGCGCTATTTTCTTGAGCCTGTTGTTAATTGTAGGCATCATAACGTTTATATTGTGGCTGAGTTTACGGCCACACCGCCCACGATTTTTCATCCATGATTTTTCAGTTACGGGTTTGGGTCTTGATAATGGGTTGGAAAATGCCCAAATTGTCTTCAATGTCACGGCCCGAAACTCCAATCTCAACATTGGGATTTACTACGACTCAATGTCCGGTTCGGTTTATTATAAGGACCAGAAACTCGGGTCCACGCCGTTGCTGGATTCCTATTACGAAGGGCCGAAGACTACGAAAGTGCTGACGGCGGTGCTGAGCGGAGAGACGTTGAACGTGGATAGGCAGCGGTGGATGGAAATAAGTAATGACCGGTCTAATAAAGGGGCCGTGGTTTTCCGGTTGGAGATTTCGTCGACCATCCGGTTCAGGATATCCGCGTGGGATAGTAAGCGGCACGGTATGCATGCTAATTGTGACGTGTCGGTGGGCCCCAATGGGATGATTTTGCCTTCTTCTAAGGATATCAGATGCCCGGTCTACTTTACATGATTTTAATTTTTTTTTTAAATTTTTTTTTTTTTTTAATATTAGATTTGAGTTTGGGTTGGTAAATTTGTTGGATTAATTGTTCGTGTGATTTGCTAATTGAGAATTTTAAAACGTAATTTCATTTTATCATTGTCTTAGTGTGTTTAATGAAATTAAATTTTTTATTTTTCATTCACAGATATAATGAATGCTATAACCCTAAAGTTGGGAATTGTTGCAATAAAACATTATATTGGTATACCTTTGTTGGTATAATTCCATGAAGGTCTTCATAGTTTAGAAGTAGTTAATTAGAGTTTCCAAAGATTCTTTAAAACCATTTTGATCACTATTTTGTCTTTGCTCATGCTTAAGTGAGATGCATTTTTTGTATTTTAATTCTTTTGCTAAAAAAGAAATTGTACTAGTTTTCTCACCTTTTCTTTACTATATAAATTCATTCAATTTTTTAAAACTATAATTCTTAAAATAAAAAAAAGAAAAATTAGGCTAGGTCTTCAAAATATTTATAAAAATCAAGAAACTCACATGTGGTAGTGGTTTTTATAAGTTGAATTTAACATACTAAAACTTAAAATTTAAATAAAAAAAAAATAAATACAAGACACGATAGATGGAATTGGAATTAGTAGGTGCACCCGGTTATCTAAAATATTAAAAGATTTATTTATTAAATATAGAAATTAGCAAAAGATAAATAAAAGAAAATAAATACTGAGAATGGAATAAATAAATAAAAAAAAGGATATATATTTATGTTTAAAAAGTCAAGTGTGGGAACATCTTCTTGGGAGTTTGAAGTAAGGAATCCCAACTCAAGTTTTTTCCAAATGAATGACGCAAAAGTTCAAACTTTACACCGAAGAAATCTCCTTTAAATGTCAGAGATGAAATACATATGATTTGTAAAACAACACAAAAGTTGACTAAAAGCACCTCTTTCCAACCAACTCAAACAAGGACACCAAAATTGCTTTACCTTTCTTCTTCACAAAGAAAATGCAACCATTATATCTATATCTCTATTACTCTCAAACCTCAATTCACTCACAAAAGCCTCATCAAAAAATGACTGCCAAAAGATATTCCAATTGTGAGCCTTCTATCTACCTATGGTTTCTTCAGGTTCTAACAATTCTAGGATTGGCCTCTTTAGCTATATGGGCCACCCTAACCCCCAAGAATCCTATTTTCACCATCTCCAATATGGATTTGAAGCCATATCAAAACAACACCCTTCTCGCAACAAACTCTTCTTCCTTAGCCTTGAATGTAACCATCTTCAATCCCAACAAAATGGTTGGTATTTTCTTTGATGACCTTAATATAACAATAGGCTGCAAAAACGAGAGCGTTATTGGGTCAAGGTCGTGGTCGAGGTTGATGCCGGGATTTTATTTGGGTCACAAGAGCAGTGATTTAGAAGAGGTTGATTTGGGTGTTGAGGATGGATTATTATTGTGTGGGAAAGTGGATTATTATTTGAGGGTTGGATTGGAGACGGGTGTTAGATATAAGATTATGTGGTTCAAGACCAAGCATCGAGGGTTGGTTCTAGAAGATTATGTTCAAATTGGTCCTGGTGGGCAAATGCAAGGAACAAAACAAATGAAGTTAAAACTAAGTTTTTTGAAGTTGTAGTTAACCCTCTGGCTTTACACTTTCTTTGGGTTTCAGATCCAAAAATTCCTATGTTTTTTTCTCTTCTCTTTCTCGTGAACATTCTAGACTACATCTATCTTTGTATAGTTCACACTTCACTCAATTATCCAACTAGTATTTGTTGTGTGATTGAAGTGGTTGTACAAAAATATGTGCAGTCCAAAATATTTGGACTCATGTAGGTAAAAAGAAAATTAAAACCTAGCCTGGAATAGAGAGGATTAGAATTGCCATTGTTATGGCAATTAGAGAGTTTTTTAAGAGTGATTTGTAAGTATTGTTTGAGTGAAAATAGTGAAGAATTATTTTGGAGCATTTGTGATAAATTTTGGGTAATATAATCTTGGGAAATTACTTTTTGTAACCTAAAAAGTTTTCAACCTTTCGAAATTACTAACCTCTTTCTTTTAAAAACTAGTTTTTATAATCTATTTCTTCTTCTTATTATTATTTTTTTTCAACTTTCATTGAGAAAGCCTCACATAGTAATAATGTCAGAGAAATATCCATGTGAAAAGACAAAAAAAGACTGGGTTTCATTCCTCTTAAGCCATTTGAAATTCCCCATCTTTCTTATTTTCTCAACTTTTATTGAGGGTTTGTTGTGTGATTTTTGGTCAGATTATGGGGGGAAAATGCTTTTGAAGTAGATTTCAACCCAAGCAACATTTGTTAAATTCCAGCTACAAATCTTGTGAGGATTCAGCATCAAACAATAATTTATTTTAAAGAAATAGGGTTTTACATTTTAGGGTTTGGAGAATTCCTTTAA ATGAGTAGTCCCAGCCAGTTGCCGGTGCAGCACACGAACACGCCAGACCAGCGCCCAACCAAGCGCCATCACTCGGCACGATACTACGCGCACCGCGTCAAGGAGAGCCTCACAACGCGCGTCTCAAAGCTCATATGCGCTATTTTCTTGAGCCTGTTGTTAATTGTAGGCATCATAACGTTTATATTGTGGCTGAGTTTACGGCCACACCGCCCACGATTTTTCATCCATGATTTTTCAGTTACGGGTTTGGGTCTTGATAATGGGTTGGAAAATGCCCAAATTGTCTTCAATGTCACGGCCCGAAACTCCAATCTCAACATTGGGATTTACTACGACTCAATGTCCGGTTCGGTTTATTATAAGGACCAGAAACTCGGGTCCACGCCGTTGCTGGATTCCTATTACGAAGGGCCGAAGACTACGAAAGTGCTGACGGCGGTGCTGAGCGGAGAGACGTTGAACGTGGATAGGCAGCGGTGGATGGAAATAAGTAATGACCGGTCTAATAAAGGGGCCGTGGTTTTCCGGTTGGAGATTTCGTCGACCATCCGGTTCAGGATATCCGCGTGGGATAGTAAGCGGCACGATATAATGAATGCTATAACCCTAAAGTTGGGAATTGTTGCAATAAAACATTATATTGGTATACCTTTGTTGGTTCTAACAATTCTAGGATTGGCCTCTTTAGCTATATGGGCCACCCTAACCCCCAAGAATCCTATTTTCACCATCTCCAATATGGATTTGAAGCCATATCAAAACAACACCCTTCTCGCAACAAACTCTTCTTCCTTAGCCTTGAATGTAACCATCTTCAATCCCAACAAAATGGTTGGTATTTTCTTTGATGACCTTAATATAACAATAGGCTGCAAAAACGAGAGCGTTATTGGGTCAAGGTCGTGGTCGAGGTTGATGCCGGGATTTTATTTGGGTCACAAGAGCAGTGATTTAGAAGAGGTTGATTTGGGTGTTGAGGATGGATTATTATTGTGTGGGAAAGTGGATTATTATTTGAGGGTTGGATTGGAGACGGGTGTTAGATATAAGATTATGTGGTTCAAGACCAAGCATCGAGGGTTGGTTCTAGAAGATTATGTTCAAATTGGTCCTGCTACAAATCTTGTGAGGATTCAGCATCAAACAATAATTTATTTTAAAGAAATAGGGTTTTACATTTTAGGGTTTGGAGAATTCCTTTAA ATGAGTAGTCCCAGCCAGTTGCCGGTGCAGCACACGAACACGCCAGACCAGCGCCCAACCAAGCGCCATCACTCGGCACGATACTACGCGCACCGCGTCAAGGAGAGCCTCACAACGCGCGTCTCAAAGCTCATATGCGCTATTTTCTTGAGCCTGTTGTTAATTGTAGGCATCATAACGTTTATATTGTGGCTGAGTTTACGGCCACACCGCCCACGATTTTTCATCCATGATTTTTCAGTTACGGGTTTGGGTCTTGATAATGGGTTGGAAAATGCCCAAATTGTCTTCAATGTCACGGCCCGAAACTCCAATCTCAACATTGGGATTTACTACGACTCAATGTCCGGTTCGGTTTATTATAAGGACCAGAAACTCGGGTCCACGCCGTTGCTGGATTCCTATTACGAAGGGCCGAAGACTACGAAAGTGCTGACGGCGGTGCTGAGCGGAGAGACGTTGAACGTGGATAGGCAGCGGTGGATGGAAATAAGTAATGACCGGTCTAATAAAGGGGCCGTGGTTTTCCGGTTGGAGATTTCGTCGACCATCCGGTTCAGGATATCCGCGTGGGATAGTAAGCGGCACGATATAATGAATGCTATAACCCTAAAGTTGGGAATTGTTGCAATAAAACATTATATTGGTATACCTTTGTTGGTTCTAACAATTCTAGGATTGGCCTCTTTAGCTATATGGGCCACCCTAACCCCCAAGAATCCTATTTTCACCATCTCCAATATGGATTTGAAGCCATATCAAAACAACACCCTTCTCGCAACAAACTCTTCTTCCTTAGCCTTGAATGTAACCATCTTCAATCCCAACAAAATGGTTGGTATTTTCTTTGATGACCTTAATATAACAATAGGCTGCAAAAACGAGAGCGTTATTGGGTCAAGGTCGTGGTCGAGGTTGATGCCGGGATTTTATTTGGGTCACAAGAGCAGTGATTTAGAAGAGGTTGATTTGGGTGTTGAGGATGGATTATTATTGTGTGGGAAAGTGGATTATTATTTGAGGGTTGGATTGGAGACGGGTGTTAGATATAAGATTATGTGGTTCAAGACCAAGCATCGAGGGTTGGTTCTAGAAGATTATGTTCAAATTGGTCCTGCTACAAATCTTGTGAGGATTCAGCATCAAACAATAATTTATTTTAAAGAAATAGGGTTTTACATTTTAGGGTTTGGAGAATTCCTTTAA MSSPSQLPVQHTNTPDQRPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVTGLGLDNGLENAQIVFNVTARNSNLNIGIYYDSMSGSVYYKDQKLGSTPLLDSYYEGPKTTKVLTAVLSGETLNVDRQRWMEISNDRSNKGAVVFRLEISSTIRFRISAWDSKRHDIMNAITLKLGIVAIKHYIGIPLLVLTILGLASLAIWATLTPKNPIFTISNMDLKPYQNNTLLATNSSSLALNVTIFNPNKMVGIFFDDLNITIGCKNESVIGSRSWSRLMPGFYLGHKSSDLEEVDLGVEDGLLLCGKVDYYLRVGLETGVRYKIMWFKTKHRGLVLEDYVQIGPATNLVRIQHQTIIYFKEIGFYILGFGEFL Homology
BLAST of CmUC03G054900 vs. NCBI nr
Match: XP_038895222.1 (NDR1/HIN1-like protein 26 [Benincasa hispida]) HSP 1 Score: 362.5 bits (929), Expect = 4.8e-96 Identity = 184/207 (88.89%), Postives = 192/207 (92.75%), Query Frame = 0
BLAST of CmUC03G054900 vs. NCBI nr
Match: XP_016899097.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0056885.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYJ99388.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa]) HSP 1 Score: 347.4 bits (890), Expect = 1.6e-91 Identity = 176/199 (88.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of CmUC03G054900 vs. NCBI nr
Match: XP_004153455.1 (NDR1/HIN1-like protein 26 [Cucumis sativus] >KGN64554.1 hypothetical protein Csa_013295 [Cucumis sativus]) HSP 1 Score: 343.2 bits (879), Expect = 3.0e-90 Identity = 175/204 (85.78%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of CmUC03G054900 vs. NCBI nr
Match: XP_022994264.1 (NDR1/HIN1-like protein 26 [Cucurbita maxima]) HSP 1 Score: 333.6 bits (854), Expect = 2.4e-87 Identity = 165/196 (84.18%), Postives = 179/196 (91.33%), Query Frame = 0
BLAST of CmUC03G054900 vs. NCBI nr
Match: XP_022955056.1 (NDR1/HIN1-like protein 26 [Cucurbita moschata] >XP_023542769.1 NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6573210.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012384.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 330.5 bits (846), Expect = 2.0e-86 Identity = 164/196 (83.67%), Postives = 177/196 (90.31%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.8e-14 Identity = 51/171 (29.82%), Postives = 84/171 (49.12%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 5.9e-12 Identity = 50/175 (28.57%), Postives = 86/175 (49.14%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.0e-11 Identity = 46/153 (30.07%), Postives = 71/153 (46.41%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.2e-10 Identity = 46/162 (28.40%), Postives = 83/162 (51.23%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 9.4e-10 Identity = 37/145 (25.52%), Postives = 71/145 (48.97%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy TrEMBL
Match: A0A5A7UTL7 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006060 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 7.8e-92 Identity = 176/199 (88.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy TrEMBL
Match: A0A1S4DSX4 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103485613 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 7.8e-92 Identity = 176/199 (88.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy TrEMBL
Match: A0A0A0LUA7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064760 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90 Identity = 175/204 (85.78%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy TrEMBL
Match: A0A6J1K2E7 (NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111490050 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87 Identity = 165/196 (84.18%), Postives = 179/196 (91.33%), Query Frame = 0
BLAST of CmUC03G054900 vs. ExPASy TrEMBL
Match: A0A6J1GSN4 (NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111457132 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 9.8e-87 Identity = 164/196 (83.67%), Postives = 177/196 (90.31%), Query Frame = 0
BLAST of CmUC03G054900 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 222.6 bits (566), Expect = 5.6e-58 Identity = 107/190 (56.32%), Postives = 141/190 (74.21%), Query Frame = 0
BLAST of CmUC03G054900 vs. TAIR 10
Match: AT1G61760.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 217.2 bits (552), Expect = 2.3e-56 Identity = 108/201 (53.73%), Postives = 143/201 (71.14%), Query Frame = 0
BLAST of CmUC03G054900 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 ) HSP 1 Score: 81.3 bits (199), Expect = 2.0e-15 Identity = 51/171 (29.82%), Postives = 84/171 (49.12%), Query Frame = 0
BLAST of CmUC03G054900 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 75.9 bits (185), Expect = 8.4e-14 Identity = 50/155 (32.26%), Postives = 80/155 (51.61%), Query Frame = 0
BLAST of CmUC03G054900 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 70.5 bits (171), Expect = 3.5e-12 Identity = 46/153 (30.07%), Postives = 71/153 (46.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|