Sed0007516 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAATTAGTAATAAATGGAATATTGTTTGTTATATAGTAAAAAAGGAAACTTCGAGGAAGCTGCAATGGCGAAACTCTCGCCGTTTCTCCCTTCCATTTAAATCCCCATAAATTCTTCATCTCTCTCTCGTTCTCATCCATTTCCATTTTCGATTACAATTTCAATTTCCCCAATGAAAATCCCAAAGCGATTTACCCCAAAACGCCTTTTCCGATCCAAGAACAGCAACCCCACCGCCGACGACCCGCCGTCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGGCTCCGCCACTCCGACCACCGTCCTCCCGCGGGACTGCTCCGATTCCGGCCAAACCCACCCCGTCGTTTCCATCAAGGAGTTGGAAGCGATTCTCTCCCGGATCGCCTCCGAGGACGAGGTCGCCGTAATGCTCGGCGAACTCGGCGGGGGCGGCCGAGACGGGTTCATCCAGCTCTCGGCGGTGCTGGACCGGGTCGGGTCGGGGTTCGAGCCGGCGGGGGAGTCGGAGCTCCGGGAGACGTTTGACTTCTTTGACGGCGATCACGACGGGCGGATCACGGCGGAGGAGCTCCACGGCGCGTTCGGTTCGATCGGCGACGAGCGGTGCACGTTAGAGGACTGCCGGCGTATGATAGCGGACGTGGACGAGAACGGGGATGGGTTCGTGTGCTTCGCGGAGTTTGTGAGGATGATGGAGCTGCAGAGATGAGTGAAGGATCTGACGGCTGTGGTGATTTGATGGGATGGTTCATGGTTTTCTTTCTTTCTTTTTTTTTGGTTTTTTGTTCGAGTGTTGAATTGACACATGATAGTTATTTTTGAGATATTTTTGTGGCCGGTTCGACCGGGTCTGTCTTTTTTTATGGTAATTCGATGATCTAATGAAGAAAATGTCAATACAACTTTGCAATTTGGGTTTCCTTATTTTTATTATATATAATATTGGGGC AAAAAATTAGTAATAAATGGAATATTGTTTGTTATATAGTAAAAAAGGAAACTTCGAGGAAGCTGCAATGGCGAAACTCTCGCCGTTTCTCCCTTCCATTTAAATCCCCATAAATTCTTCATCTCTCTCTCGTTCTCATCCATTTCCATTTTCGATTACAATTTCAATTTCCCCAATGAAAATCCCAAAGCGATTTACCCCAAAACGCCTTTTCCGATCCAAGAACAGCAACCCCACCGCCGACGACCCGCCGTCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGGCTCCGCCACTCCGACCACCGTCCTCCCGCGGGACTGCTCCGATTCCGGCCAAACCCACCCCGTCGTTTCCATCAAGGAGTTGGAAGCGATTCTCTCCCGGATCGCCTCCGAGGACGAGGTCGCCGTAATGCTCGGCGAACTCGGCGGGGGCGGCCGAGACGGGTTCATCCAGCTCTCGGCGGTGCTGGACCGGGTCGGGTCGGGGTTCGAGCCGGCGGGGGAGTCGGAGCTCCGGGAGACGTTTGACTTCTTTGACGGCGATCACGACGGGCGGATCACGGCGGAGGAGCTCCACGGCGCGTTCGGTTCGATCGGCGACGAGCGGTGCACGTTAGAGGACTGCCGGCGTATGATAGCGGACGTGGACGAGAACGGGGATGGGTTCGTGTGCTTCGCGGAGTTTGTGAGGATGATGGAGCTGCAGAGATGAGTGAAGGATCTGACGGCTGTGGTGATTTGATGGGATGGTTCATGGTTTTCTTTCTTTCTTTTTTTTTGGTTTTTTGTTCGAGTGTTGAATTGACACATGATAGTTATTTTTGAGATATTTTTGTGGCCGGTTCGACCGGGTCTGTCTTTTTTTATGGTAATTCGATGATCTAATGAAGAAAATGTCAATACAACTTTGCAATTTGGGTTTCCTTATTTTTATTATATATAATATTGGGGC ATGAAAATCCCAAAGCGATTTACCCCAAAACGCCTTTTCCGATCCAAGAACAGCAACCCCACCGCCGACGACCCGCCGTCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGGCTCCGCCACTCCGACCACCGTCCTCCCGCGGGACTGCTCCGATTCCGGCCAAACCCACCCCGTCGTTTCCATCAAGGAGTTGGAAGCGATTCTCTCCCGGATCGCCTCCGAGGACGAGGTCGCCGTAATGCTCGGCGAACTCGGCGGGGGCGGCCGAGACGGGTTCATCCAGCTCTCGGCGGTGCTGGACCGGGTCGGGTCGGGGTTCGAGCCGGCGGGGGAGTCGGAGCTCCGGGAGACGTTTGACTTCTTTGACGGCGATCACGACGGGCGGATCACGGCGGAGGAGCTCCACGGCGCGTTCGGTTCGATCGGCGACGAGCGGTGCACGTTAGAGGACTGCCGGCGTATGATAGCGGACGTGGACGAGAACGGGGATGGGTTCGTGTGCTTCGCGGAGTTTGTGAGGATGATGGAGCTGCAGAGATGA MKIPKRFTPKRLFRSKNSNPTADDPPSPSSSSSSAAGSATPTTVLPRDCSDSGQTHPVVSIKELEAILSRIASEDEVAVMLGELGGGGRDGFIQLSAVLDRVGSGFEPAGESELRETFDFFDGDHDGRITAEELHGAFGSIGDERCTLEDCRRMIADVDENGDGFVCFAEFVRMMELQR Homology
BLAST of Sed0007516 vs. NCBI nr
Match: XP_022932888.1 (probable calcium-binding protein CML36 [Cucurbita moschata] >KAG6603330.1 putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 228.0 bits (580), Expect = 6.3e-56 Identity = 135/197 (68.53%), Postives = 151/197 (76.65%), Query Frame = 0
BLAST of Sed0007516 vs. NCBI nr
Match: XP_023543601.1 (probable calcium-binding protein CML36 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55 Identity = 135/197 (68.53%), Postives = 150/197 (76.14%), Query Frame = 0
BLAST of Sed0007516 vs. NCBI nr
Match: XP_022153870.1 (probable calcium-binding protein CML36 [Momordica charantia]) HSP 1 Score: 224.6 bits (571), Expect = 7.0e-55 Identity = 132/201 (65.67%), Postives = 146/201 (72.64%), Query Frame = 0
BLAST of Sed0007516 vs. NCBI nr
Match: XP_038883626.1 (probable calcium-binding protein CML35 [Benincasa hispida]) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54 Identity = 134/199 (67.34%), Postives = 149/199 (74.87%), Query Frame = 0
BLAST of Sed0007516 vs. NCBI nr
Match: XP_022967907.1 (probable calcium-binding protein CML36 [Cucurbita maxima]) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54 Identity = 135/197 (68.53%), Postives = 150/197 (76.14%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: Q9SS31 (Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.6e-30 Identity = 96/205 (46.83%), Postives = 122/205 (59.51%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: P30188 (Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 PE=2 SV=2) HSP 1 Score: 128.6 bits (322), Expect = 6.9e-29 Identity = 88/200 (44.00%), Postives = 116/200 (58.00%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: Q5ZCK5 (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica OX=39947 GN=CML16 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.5e-15 Identity = 60/125 (48.00%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 5.6e-15 Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.8e-14 Identity = 50/125 (40.00%), Postives = 75/125 (60.00%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A6J1F310 (probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC111439413 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 3.1e-56 Identity = 135/197 (68.53%), Postives = 151/197 (76.65%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A6J1DI26 (probable calcium-binding protein CML36 OS=Momordica charantia OX=3673 GN=LOC111021283 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 3.4e-55 Identity = 132/201 (65.67%), Postives = 146/201 (72.64%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A6J1HS37 (probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC111467281 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 5.8e-55 Identity = 135/197 (68.53%), Postives = 150/197 (76.14%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A5A7VA05 (Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G00410 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 9.2e-53 Identity = 131/196 (66.84%), Postives = 148/196 (75.51%), Query Frame = 0
BLAST of Sed0007516 vs. ExPASy TrEMBL
Match: A0A1S3C5U3 (probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103497255 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 9.2e-53 Identity = 131/196 (66.84%), Postives = 148/196 (75.51%), Query Frame = 0
BLAST of Sed0007516 vs. TAIR 10
Match: AT3G10190.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31 Identity = 96/205 (46.83%), Postives = 122/205 (59.51%), Query Frame = 0
BLAST of Sed0007516 vs. TAIR 10
Match: AT2G41410.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30 Identity = 88/200 (44.00%), Postives = 116/200 (58.00%), Query Frame = 0
BLAST of Sed0007516 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 ) HSP 1 Score: 79.3 bits (194), Expect = 3.4e-15 Identity = 50/125 (40.00%), Postives = 75/125 (60.00%), Query Frame = 0
BLAST of Sed0007516 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family ) HSP 1 Score: 77.8 bits (190), Expect = 9.9e-15 Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 0
BLAST of Sed0007516 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family ) HSP 1 Score: 72.0 bits (175), Expect = 5.4e-13 Identity = 45/123 (36.59%), Postives = 71/123 (57.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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