CmUC08G145310 (gene) Watermelon (USVL531) v1

Overview
NameCmUC08G145310
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr08: 5869541 .. 5870422 (-)
RNA-Seq ExpressionCmUC08G145310
SyntenyCmUC08G145310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGAGAAAATATCACTCCACCGCAAACTTCTTCACTCTCCAACCCTAGCCAAGGACCTTGCACTTTCCTCTACTTCATATCATTTGAGATTGCTTTCAAGTAATTCAATCCAAATTTCATCTACTTCAGTGTTCTTTTCTTGTTTGTTCAAATATTCTGATCGGTTTTTGTTCAAATCTTCCATTGAAATCTCTTGAGGTTTTTCCAATTCCAACCTTTCCTCTGTTCAAGTATTACTTGCAGGTCAGTTTTTGCTGCCGTTCTACTTTATTTGGTTATTATTATTATTATTATTTTTTGGAATTTACTTCGCTTCACTTGATTCCGTTTCATTTTTCTCATCATTTCACTCTTTGGATCGTTTTTGCTATTTTTTGTTTCTCTGTTTTTTTTTATTAATTATTTCGATTATAATTAGATTTTCGATTTTTGTCATCTTCTTAGTTCGGGAAGAATTTCATCTTGGAGTTTCGAAGATAGTCGTTATCGTTGGTTTTTTTTTTCCTCCAATTGTTTGTCATTTTTCAATATTGAGGATTTGTGTTTGTCCGGTGTTAGAGTAAGTTCCTATCCTTAATTATTCTAATTTTTTTTCTTTTGTTAATTGTGACGAGTTCAATGTGCATTTGAGTTGGATTACAAGCTCTTTTTTTTTTTTTTTTTTTTTTTTTGGGATAAAATTTTCGCGTTTTATGAAGATAAAGTGAATATTGCCTGAAGTTCATCGTGTTATATACAGATTCATGCGTAAGCCCTTCAAGGATTACTCTAGTGAAGATTGTCTGGTTGTAGAATGTTCAAAACCAGGGCTTGTTCCATCGTTTCAGCATCTTTTGGTCTACATCTATTATTCAGTAAAAATCCGCACCATGTGCTGA

mRNA sequence

ATGAGAGAGAAAATATCACTCCACCGCAAACTTCTTCACTCTCCAACCCTAGCCAAGGACCTTGCACTTTCCTCTACTTCATATCATTTGAGATTGCTTTCAATTCGGGAAGAATTTCATCTTGGAGTTTCGAAGATAGTCGTTATCGTTGGTTTTTTTTTTCCTCCAATTGTTTGTCATTTTTCAATATTGAGGATTTGTGTTTGTCCGGTGTTAGAATTCATGCGTAAGCCCTTCAAGGATTACTCTAGTGAAGATTGTCTGGTTGTAGAATGTTCAAAACCAGGGCTTGTTCCATCGTTTCAGCATCTTTTGGTCTACATCTATTATTCAGTAAAAATCCGCACCATGTGCTGA

Coding sequence (CDS)

ATGAGAGAGAAAATATCACTCCACCGCAAACTTCTTCACTCTCCAACCCTAGCCAAGGACCTTGCACTTTCCTCTACTTCATATCATTTGAGATTGCTTTCAATTCGGGAAGAATTTCATCTTGGAGTTTCGAAGATAGTCGTTATCGTTGGTTTTTTTTTTCCTCCAATTGTTTGTCATTTTTCAATATTGAGGATTTGTGTTTGTCCGGTGTTAGAATTCATGCGTAAGCCCTTCAAGGATTACTCTAGTGAAGATTGTCTGGTTGTAGAATGTTCAAAACCAGGGCTTGTTCCATCGTTTCAGCATCTTTTGGTCTACATCTATTATTCAGTAAAAATCCGCACCATGTGCTGA

Protein sequence

MREKISLHRKLLHSPTLAKDLALSSTSYHLRLLSIREEFHLGVSKIVVIVGFFFPPIVCHFSILRICVCPVLEFMRKPFKDYSSEDCLVVECSKPGLVPSFQHLLVYIYYSVKIRTMC
Homology
[Close]
BLAST of CmUC08G145310 vs. NCBI nr
Match: KGN47994.2 (hypothetical protein Csa_004010, partial [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-14
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0 

Query: 70  PVLEFMRKPFKDYSSEDCLVVECSKPGLVPSFQHLLVYIYYSVKIRTMC 119
           P  EFM+K FKDYSSEDCLVVECSKPGLVPSFQHLLVY YYS KI TMC
Sbjct: 29  PGFEFMQKFFKDYSSEDCLVVECSKPGLVPSFQHLLVYSYYSAKICTMC 77

The following BLAST results are available for this feature:
BLAST of CmUC08G145310 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47994.21.4e-1485.71hypothetical protein Csa_004010, partial [Cucumis sativus][more]
BLAST of CmUC08G145310 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC08G145310 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC08G145310 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC08G145310.1CmUC08G145310.1mRNA