CmUC05G099980 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCAAGCTCTGTCACGTCGACACGTGGCTTTTACTCATCCTGGACAAAAAAGGAAAACAAGAAATTTGAGGAAGCATTAGCCTTCTATGACCAGGACACACCAGACCGTTTTGAGAAAGTAGCGAGGGCTGTTGGTGGTGGAAAAACAGCTGAGGAAGCAAGAAGGCTCTATGAGCTACTAGTGCGAGATGTCAGAAAAATAGAAGCTGGTCAAGTCCAAATACCCCTCTACAAGAACGCTGGATGTAATGGCAGAGGGTACGCTGACCAGCAGAGGTAATATCCTATTTGCTGAATATTTCCTCTCCGAAAATCATTCCAAGCCTGAATCCTATCCTCGGTAATCTTCTTCTTTCTACTAGTACATTAGAATAAATGTCCTTCCCAAGAAACTTATGTCTTATAATTACTAGAGAAATATATTGAGACGATTCTATAACCAGCCCGTTGTTGAAATATGGTTTGATGTGCAGAAATGTATTCACCAGACTACTAACTTCTCATTTCAACATTTTATACAACATCGCACTTGGAACTTCAGTTTCCTTTGAAGTAGATCAAGCGAAGAATCTGAAAATTACCTGA ATGGCATCAAGCTCTGTCACGTCGACACGTGGCTTTTACTCATCCTGGACAAAAAAGGAAAACAAGAAATTTGAGGAAGCATTAGCCTTCTATGACCAGGACACACCAGACCGTTTTGAGAAAGTAGCGAGGGCTGTTGGTGGTGGAAAAACAGCTGAGGAAGCAAGAAGGCTCTATGAGCTACTAGTGCGAGATGTCAGAAAAATAGAAGCTGGTCAAGTCCAAATACCCCTCTACAAGAACGCTGGATGTAATGGCAGAGGGTACGCTGACCAGCAGAGAAATGTATTCACCAGACTACTAACTTCTCATTTCAACATTTTATACAACATCGCACTTGGAACTTCAGTTTCCTTTGAAGTAGATCAAGCGAAGAATCTGAAAATTACCTGA ATGGCATCAAGCTCTGTCACGTCGACACGTGGCTTTTACTCATCCTGGACAAAAAAGGAAAACAAGAAATTTGAGGAAGCATTAGCCTTCTATGACCAGGACACACCAGACCGTTTTGAGAAAGTAGCGAGGGCTGTTGGTGGTGGAAAAACAGCTGAGGAAGCAAGAAGGCTCTATGAGCTACTAGTGCGAGATGTCAGAAAAATAGAAGCTGGTCAAGTCCAAATACCCCTCTACAAGAACGCTGGATGTAATGGCAGAGGGTACGCTGACCAGCAGAGAAATGTATTCACCAGACTACTAACTTCTCATTTCAACATTTTATACAACATCGCACTTGGAACTTCAGTTTCCTTTGAAGTAGATCAAGCGAAGAATCTGAAAATTACCTGA MASSSVTSTRGFYSSWTKKENKKFEEALAFYDQDTPDRFEKVARAVGGGKTAEEARRLYELLVRDVRKIEAGQVQIPLYKNAGCNGRGYADQQRNVFTRLLTSHFNILYNIALGTSVSFEVDQAKNLKIT Homology
BLAST of CmUC05G099980 vs. NCBI nr
Match: KGN60114.2 (hypothetical protein Csa_000871 [Cucumis sativus]) HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43 Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of CmUC05G099980 vs. NCBI nr
Match: XP_008466554.1 (PREDICTED: protein RADIALIS-like 4 [Cucumis melo] >KAA0041600.1 protein RADIALIS-like 3 [Cucumis melo var. makuwa]) HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42 Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CmUC05G099980 vs. NCBI nr
Match: XP_022936283.1 (protein RADIALIS-like 3 [Cucurbita moschata] >KAG6591311.1 Protein RADIALIS-like 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024194.1 Protein RADIALIS-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179.5 bits (454), Expect = 1.9e-41 Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CmUC05G099980 vs. NCBI nr
Match: XP_022155868.1 (protein RADIALIS-like 4 [Momordica charantia]) HSP 1 Score: 161.0 bits (406), Expect = 6.9e-36 Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of CmUC05G099980 vs. NCBI nr
Match: XP_022940511.1 (protein RADIALIS-like 3 [Cucurbita moschata]) HSP 1 Score: 151.4 bits (381), Expect = 5.5e-33 Identity = 76/86 (88.37%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18 Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17 Identity = 51/96 (53.12%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.6e-17 Identity = 53/89 (59.55%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16 Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy Swiss-Prot
Match: Q1G3C4 (Protein RADIALIS-like 4 OS=Arabidopsis thaliana OX=3702 GN=RL4 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 6.3e-16 Identity = 46/81 (56.79%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy TrEMBL
Match: A0A5A7TE80 (Protein RADIALIS-like 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00690 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43 Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy TrEMBL
Match: A0A0A0LGL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G857080 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43 Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy TrEMBL
Match: A0A1S3CRN8 (protein RADIALIS-like 4 OS=Cucumis melo OX=3656 GN=LOC103503940 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43 Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy TrEMBL
Match: A0A6J1FCU5 (protein RADIALIS-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111442950 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 9.1e-42 Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CmUC05G099980 vs. ExPASy TrEMBL
Match: A0A6J1DP29 (protein RADIALIS-like 4 OS=Momordica charantia OX=3673 GN=LOC111022857 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 3.3e-36 Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of CmUC05G099980 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 ) HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18 Identity = 51/96 (53.12%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of CmUC05G099980 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18 Identity = 53/89 (59.55%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of CmUC05G099980 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 ) HSP 1 Score: 85.9 bits (211), Expect = 2.6e-17 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of CmUC05G099980 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 ) HSP 1 Score: 85.1 bits (209), Expect = 4.5e-17 Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of CmUC05G099980 vs. TAIR 10
Match: AT2G18328.1 (RAD-like 4 ) HSP 1 Score: 85.1 bits (209), Expect = 4.5e-17 Identity = 46/81 (56.79%), Postives = 63/81 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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