Sed0007632.5 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGAACATCTTGAGCCAAACAAGGTGTTGGGCTTCATCACCTCACCTCACCTCATCTCCTCTTAAAACAAACGCCCCCTTAACATTGCAGATAACTTCCTCCAAGTAATTGAAGAATTTGAATATCTAACTTCCTCTTTTTCTCTGTTTTTTGAGTTTCTTTCTCTACAAATAGATCGCAACAGAACGTTTCAAAAATTCAAATACGCTATGGAGCAGACAGTGAGTTCATTCGAATCCTCCATGAGATTTTTCTCCGACCAAGAACTCTGCTACGCCGATCTCCTCACTCCTCAACAGGTTGGATCTTCGCTTCATTCGTAATCTCCGATCACTGTTCTTTCATCTCAAGCTCCGATTCCGAACAGGTGATTGCAAGAATCCAAGTCGCCGTTCTCAACTTCCTCACGATTCTCACTTCCTCCTCTCCTGCCATCTCGAATCTCCCTCTGGTACGATTTCTATCCAAGAAATGGCACGAAATGAGTTTTATGTACTTCGATTTCTTGCTCTTTCCGTTTTTGAAACCCTAGGTTGTTCTCTGTTCCTGATTGAACAGATCGATCGACGATCGAGCAATAGCCGAGTGAATCGAGGCATTTTGACGGAAGAATCGTGTATTTTCCTTTCGAATTCGTTTTGTACGCGGTCTTTGATGCGATCTAATGCTGCGAAGGCTTTTGTTAGAGGTAATGTAATCATCGAACCTTAATTCTCGGCGGTCAGGTTCTTCGAATGTTGAATTTGTTCGGAGTTGTTTGGATGGTGTTTTGTAGGAGGAAATTAGTTTGATGAGTTATTTTGAGTAGTTAGAATTTGAGAGTTGCAACCAAAAAGTTGTTTGGATGTTATTTTTACTTAGAGGAGTTAGAGACACAATAACCAGTTATTTGAATAGTTAAAAAAGAATTATTAAAAAAGACCGGTTAAGAATGAGTTATTTTGAATATTTAAAAATGAATGATTAAAAATGAGTGGTTAGAAATGAGGAGTTATTTTGAATAGTTAAAAATGAGTGATTAGAAATGAGGAGTTATTTTGAGTAGTTAGAAATTAGTTGTTAGAAATGAAAAGTTATTTTGAGTAGTTAGAAATTAGTTGTTAGAAATGAAAAGTTATTTTGAGTAATTAGAAATTAGTTGTTAAAAATGAGGACTTATTTTGAGTAGTTAGAAATGAATGATTAGAAATTAGTTCTTACAAAGGAAGAGTTATTTTAAGTAATTAGAAATGATGATTAGAAATTAGTTGTTAAAAATGAGGACTTATTTTGACTAATTAGAAATGAATGATTAGAAATGAAGAATTAGTTTTAGTAGTAAAAATAAGGAGTATTCTTGAGGGGTGGTGTAGTCCTTGAAGTCTTGGATTTTGAAAGTACACTCCCCTCAAGGTCCTAAGTTCGAGACTCACATGTGACAGTAATTTGTAGACACCTCCCGCGTCGTTATTCCTTTGATGTCTCCTCATGCCCTAGGCCGAAAAATAAGGAGTTGTTTTTGAAGTGGGGTTAGTAAATACTCATTTTAAATCCTCCATTAATTCAACAAACAAACACCCTTCTATTTTGGTCAATTGTGCTGTAGTGTGGAAGCTGATGGAGATTTGCTCTCAGATTCTGGGTCAGGAAAAGCGAGTCACACAGAGGGAGCTTTTCTACAAGTTGATATGTGATTCACCTGCCTATTTCCCAACTCAATTGCATGTCAATAGAACAATTCAAGGTGATTTTGTGTTCTATGAACAAACACTGGCTGGTTTAAGGCCTAAAATTACATTGAACATAGTGATGAAATTTGGGTAGTTTTGTTTTTGTAGATGTTGTAGCTTTACTTCGATGCAGCCGTTACAGCCTTGGAATTATGGCATCTAGTAGGGGACTTGTAGCTGGGCGTCTTTTGATTCAGGCACATTGCTATGTCTTTTATTTTTGGATCTTATATTGCAATATAAAAGTATTCAAAATTACATGATAACCAAGTCATTTGAAGAACTTGAATTGTCCTTAATCTTGAGATCACTTAAATACTTTTTGTTTTATATCTAGCTGAGCATTCGAATCAGCTAACATGCACCTTGTTTATTATCACTGAACAAATGGTCTGATCCTTCAACATTTGACTGTCAAATAAACTTGTATAAAATTAACTGAGGTAAATGGCCAACAAAGGAGTAGTACTCCAATAACATTATGTATAACATGGTAACCAGTTGATTACCGGTCGAGTCCCAAATGTGGTTGAATTCAAAATTATTAGGTAGGTGGTTACTAAAGATTGAACTCATAATTTCTTAAAAAGTACAAAGTCCTATTTGATCACTAGGCCGATGGTTAAAGTCTTAGAATACTTATTACTCAGTGAATAATTGCATACTTTCTTCTATATACAGCACCTCTATTTTATAAATTATAACTAAATGTCGAGTAAATTCTTATATCCTATCATATGCATGAGATGTAAATTGGCTAGTATTGAGTCCCTCTTTTTCTATTTTCACATCAATATTACTTTGAAACCATTGCCAATTGCTAATTTATGTATAGTTTTATTTCTTGGTATCTGGCCAGCACACACTTATAAGGTTTCTCATATTGAACCAAATTCTTGAATGTTGAATCCTTTATAAACAATTTCAATTGCTGTAGGAGCCAGAGCAAGAAACTGTGGACTGCACTGCCTGTGGTTCCTCTGGATATGCCATTTCCGGCGACTTGGACCTGCTGCAGAAGTTGATTCTCAAGACCGACGCCCGGTACATAATTGTGATCGAAAAGGTGATTTAAGTTTCTGAAGATATGATTTGCTAGTTAATTATACTTTTGTGAAGACAAAAAATGTGAAAAATGTAGTCAACTACCAAACATTGTTGGTTATACAGCACGCAATATTCCAGCGGCTGGCGGAGGATTGTGTTTTCAACCACATTCCCAGTATTCTTATAACAGCCAAAGGATATCCAGACATAGCAACAAGGTAAGTTTGTTCAACTAGTTTCGAAGATCGCAGTTCCTCGATGCGTTCTTGAAGCCGTAACTAAAACTCTGTGATCTGCCTTTTCAGGTATTTTCTTCACAAAATCAGCAAAATTTTCCCCCATCTGCCGATTTTCGGCCTTGTTGATTGGTATGATCCATTTTAACATCAACTCAGCAACAAGGTTGTAGAACTGTGTTCTCACTTTTAGCATTTGGGGTTCTAAAGGAACCCTGCTGGATTGGCTATATTGTGCACCTTCAAGTATGGAAGTATTGGGATGGGCTTGGAGGCATATAGATATGGTATGTCTCAGTTCCTTGATTGTTCTATCCATTTCTGATTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAGATGTTCAAACATTTGGATTTTGGTTTTTTTTCTTTTTTGAACTAAAGGATGTTTTATAGCCAAATTACAAAAAGGAAAACAAGTTTTTTATTTTTTGTTTTAAAAAGTAAAAACCATATATGTTTGATAACTCATTTTAGTTTTATGTTTTTAAAAAATGAAAAACCAAAAAACATGTTCGACAACTGTTTTTTGTTTTCAAATATCACATTTTATTTGGATTTTCTTAGTTTTTTACTATTTTTTCTTGTTCTTTTCCTACTTTTTTTTAAACAAAAACTTGTTTTTAAAAACTATTATTTTTAGTTTTTAGAATTTCTTTAATATTTTTAAAATTTCAAAACAAAAACTAAAATTGGTTATCAAACAAACTTGTTTTTAAAAAAGTAAAAAAATAAAAAATAAAAAACCAAAAACGAAATGGTTATCAAACGAGACCTTAACTTTCTCTACAGTCATGAGTCCAATTTATTGATTTTTACTTTGATATCTACATTTTACCTAAACTCTAAAAAATTAAAGAGAAGAATTTGGGTGCACCCCGGGTAGCACCCCCACCATGACATCACTTATGTGGCATCTTTGGTGCCACACATTTTATCTCACTTTTTTTACTTTATATTTATTATAAAAAAAATTAAAAGAAAAAAGAAGATGTGTGGCTTCAAATGAATGATATCATGGTGGAGGTGCTACCCGGGGTGCACCTAAATTCTCCTCAAAATTAAATTGAAATTTGAAAATAAAGGTCGTGTTTGATAACTATTTGATTTTTTGTTTTTGAAATTTAAGCTTACTTTTACTCCAAATTCTTACAATATATTCCATCTTTTCTAGAGTGTATCTATCTTTTTCCTTTAGAAAAACTTTTGAAAGCTACCTATTTTTTCTTCCAAATTATGGCTTAGCTCCTAAAAATATAGATAAGACGTAGAAACTCAAGTAAGAAAAAACATAGGATAAGATAGATGTTGTAGGCCTAAATTTTAAAAATAAAAAATAAAATGGATATCAAACGGGACTTAAGAAACGTGCTTCTAAAACTTGTATTGGTTTTTAGAAGTTGGTTAAGATTCAAAACACTTTCTTAATGAAAAGAAAAGAAAAAAAGCTAAATTTTTTTTTTTTTTTAAATCAAATGGATGTTAATTTGTTTGGCGTGGCAGCTTGCAATGTTAAATGGTTAGGAGTGCGAGGAGATGATTTAGAAGTGATTCCACAACAATCTTTGGTTTCACTCAAACCCCGTGACCTACAAATTGCTAAAAGCTTGATGTCTTCACAAATATTACAGGTATTATTTATTTATTGTATTTTATTTTTTTAGGGTTTATCTAAATCCTAAGAATATTATTAATTAAACAACCCACAGGAGAATTATCGACAAGAGCTGGCCTTGATGGTTGAGAGAGGCCAAAAGGCTGAACTTGAAGCTTTGTACCACAATGGATTTGATTATTTGGAGAAGTATCTTGTCAAAAAGATTATTCAATTTAATTACATCTGACTTTATTTTTAACCTGC TGAAGAACATCTTGAGCCAAACAAGGTGTTGGGCTTCATCACCTCACCTCACCTCATCTCCTCTTAAAACAAACGCCCCCTTAACATTGCAGATAACTTCCTCCAAGTAATTGAAGAATTTGAATATCTAACTTCCTCTTTTTCTCTGTTTTTTGAGTTTCTTTCTCTACAAATAGATCGCAACAGAACGTTTCAAAAATTCAAATACGCTATGGAGCAGACAGTGAGTTCATTCGAATCCTCCATGAGATTTTTCTCCGACCAAGAACTCTGCTACGCCGATCTCCTCACTCCTCAACAGGTTGGATCTTCGCTTCATTCGTAATCTCCGATCACTGTTCTTTCATCTCAAGCTCCGATTCCGAACAGGTGATTGCAAGAATCCAAGTCGCCGTTCTCAACTTCCTCACGATTCTCACTTCCTCCTCTCCTGCCATCTCGAATCTCCCTCTGATCGATCGACGATCGAGCAATAGCCGAGTGAATCGAGGCATTTTGACGGAAGAATCGTGTATTTTCCTTTCGAATTCGTTTTGTACGCGGTCTTTGATGCGATCTAATGCTGCGAAGGCTTTTGTTAGAGTGTGGAAGCTGATGGAGATTTGCTCTCAGATTCTGGGTCAGGAAAAGCGAGTCACACAGAGGGAGCTTTTCTACAAGTTGATATGTGATTCACCTGCCTATTTCCCAACTCAATTGCATGTCAATAGAACAATTCAAGATGTTGTAGCTTTACTTCGATGCAGCCGTTACAGCCTTGGAATTATGGCATCTAGTAGGGGACTTGTAGCTGGGCGTCTTTTGATTCAGGAGCCAGAGCAAGAAACTGTGGACTGCACTGCCTGTGGTTCCTCTGGATATGCCATTTCCGGCGACTTGGACCTGCTGCAGAAGTTGATTCTCAAGACCGACGCCCGGTACATAATTGTGATCGAAAAGCACGCAATATTCCAGCGGCTGGCGGAGGATTGTGTTTTCAACCACATTCCCAGTATTCTTATAACAGCCAAAGGATATCCAGACATAGCAACAAGGAACCCTGCTGGATTGGCTATATTGTGCACCTTCAAGTATGGAAGTATTGGGATGGGCTTGGAGGCATATAGATATGCTTGCAATGTTAAATGGTTAGGAGTGCGAGGAGATGATTTAGAAGTGATTCCACAACAATCTTTGGTTTCACTCAAACCCCGTGACCTACAAATTGCTAAAAGCTTGATGTCTTCACAAATATTACAGGAGAATTATCGACAAGAGCTGGCCTTGATGGTTGAGAGAGGCCAAAAGGCTGAACTTGAAGCTTTGTACCACAATGGATTTGATTATTTGGAGAAGTATCTTGTCAAAAAGATTATTCAATTTAATTACATCTGACTTTATTTTTAACCTGC ATGCGATCTAATGCTGCGAAGGCTTTTGTTAGAGTGTGGAAGCTGATGGAGATTTGCTCTCAGATTCTGGGTCAGGAAAAGCGAGTCACACAGAGGGAGCTTTTCTACAAGTTGATATGTGATTCACCTGCCTATTTCCCAACTCAATTGCATGTCAATAGAACAATTCAAGATGTTGTAGCTTTACTTCGATGCAGCCGTTACAGCCTTGGAATTATGGCATCTAGTAGGGGACTTGTAGCTGGGCGTCTTTTGATTCAGGAGCCAGAGCAAGAAACTGTGGACTGCACTGCCTGTGGTTCCTCTGGATATGCCATTTCCGGCGACTTGGACCTGCTGCAGAAGTTGATTCTCAAGACCGACGCCCGGTACATAATTGTGATCGAAAAGCACGCAATATTCCAGCGGCTGGCGGAGGATTGTGTTTTCAACCACATTCCCAGTATTCTTATAACAGCCAAAGGATATCCAGACATAGCAACAAGGAACCCTGCTGGATTGGCTATATTGTGCACCTTCAAGTATGGAAGTATTGGGATGGGCTTGGAGGCATATAGATATGCTTGCAATGTTAAATGGTTAGGAGTGCGAGGAGATGATTTAGAAGTGATTCCACAACAATCTTTGGTTTCACTCAAACCCCGTGACCTACAAATTGCTAAAAGCTTGATGTCTTCACAAATATTACAGGAGAATTATCGACAAGAGCTGGCCTTGATGGTTGAGAGAGGCCAAAAGGCTGAACTTGAAGCTTTGTACCACAATGGATTTGATTATTTGGAGAAGTATCTTGTCAAAAAGATTATTCAATTTAATTACATCTGA MRSNAAKAFVRVWKLMEICSQILGQEKRVTQRELFYKLICDSPAYFPTQLHVNRTIQDVVALLRCSRYSLGIMASSRGLVAGRLLIQEPEQETVDCTACGSSGYAISGDLDLLQKLILKTDARYIIVIEKHAIFQRLAEDCVFNHIPSILITAKGYPDIATRNPAGLAILCTFKYGSIGMGLEAYRYACNVKWLGVRGDDLEVIPQQSLVSLKPRDLQIAKSLMSSQILQENYRQELALMVERGQKAELEALYHNGFDYLEKYLVKKIIQFNYI Homology
BLAST of Sed0007632.5 vs. NCBI nr
Match: XP_023533742.1 (meiotic recombination protein SPO11-2 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 503.4 bits (1295), Expect = 1.2e-138 Identity = 254/290 (87.59%), Postives = 268/290 (92.41%), Query Frame = 0
BLAST of Sed0007632.5 vs. NCBI nr
Match: XP_023533741.1 (meiotic recombination protein SPO11-2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 501.5 bits (1290), Expect = 4.6e-138 Identity = 254/295 (86.10%), Postives = 268/295 (90.85%), Query Frame = 0
BLAST of Sed0007632.5 vs. NCBI nr
Match: XP_022958585.1 (meiotic recombination protein SPO11-2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 498.4 bits (1282), Expect = 3.9e-137 Identity = 252/295 (85.42%), Postives = 267/295 (90.51%), Query Frame = 0
BLAST of Sed0007632.5 vs. NCBI nr
Match: KAG6606069.1 (Meiotic recombination protein SPO11-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 497.7 bits (1280), Expect = 6.6e-137 Identity = 251/295 (85.08%), Postives = 268/295 (90.85%), Query Frame = 0
BLAST of Sed0007632.5 vs. NCBI nr
Match: XP_022995805.1 (meiotic recombination protein SPO11-2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-136 Identity = 250/295 (84.75%), Postives = 266/295 (90.17%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy Swiss-Prot
Match: Q9M4A1 (Meiotic recombination protein SPO11-2 OS=Arabidopsis thaliana OX=3702 GN=SPO11-2 PE=1 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 4.3e-115 Identity = 205/293 (69.97%), Postives = 243/293 (82.94%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy Swiss-Prot
Match: Q6ZD95 (Meiotic recombination protein SPO11-2 OS=Oryza sativa subsp. japonica OX=39947 GN=SPO11-2 PE=2 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 4.5e-104 Identity = 187/294 (63.61%), Postives = 234/294 (79.59%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy Swiss-Prot
Match: Q5ZPI9 (Meiotic recombination protein SPO11-2 OS=Oryza sativa subsp. indica OX=39946 GN=SPO11-2 PE=1 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 5.8e-104 Identity = 187/294 (63.61%), Postives = 234/294 (79.59%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy Swiss-Prot
Match: Q9LZ03 (DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana OX=3702 GN=TOP6A PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 5.8e-35 Identity = 94/287 (32.75%), Postives = 159/287 (55.40%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy Swiss-Prot
Match: A2XFC1 (DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp. indica OX=39946 GN=TOP6A3 PE=1 SV=2) HSP 1 Score: 149.4 bits (376), Expect = 5.8e-35 Identity = 99/298 (33.22%), Postives = 162/298 (54.36%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy TrEMBL
Match: A0A6J1H3X3 (meiotic recombination protein SPO11-2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459771 PE=3 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 1.9e-137 Identity = 252/295 (85.42%), Postives = 267/295 (90.51%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy TrEMBL
Match: A0A6J1K4Y3 (meiotic recombination protein SPO11-2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491232 PE=3 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 7.1e-137 Identity = 250/295 (84.75%), Postives = 266/295 (90.17%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy TrEMBL
Match: A0A1S3AUC6 (meiotic recombination protein SPO11-2 OS=Cucumis melo OX=3656 GN=LOC103482788 PE=3 SV=1) HSP 1 Score: 489.6 bits (1259), Expect = 8.7e-135 Identity = 249/295 (84.41%), Postives = 264/295 (89.49%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy TrEMBL
Match: A0A6J1DVQ2 (meiotic recombination protein SPO11-2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023944 PE=3 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 9.6e-134 Identity = 244/295 (82.71%), Postives = 262/295 (88.81%), Query Frame = 0
BLAST of Sed0007632.5 vs. ExPASy TrEMBL
Match: A0A6J1DSN2 (meiotic recombination protein SPO11-2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023944 PE=3 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 9.6e-134 Identity = 244/295 (82.71%), Postives = 262/295 (88.81%), Query Frame = 0
BLAST of Sed0007632.5 vs. TAIR 10
Match: AT1G63990.1 (sporulation 11-2 ) HSP 1 Score: 415.6 bits (1067), Expect = 3.1e-116 Identity = 205/293 (69.97%), Postives = 243/293 (82.94%), Query Frame = 0
BLAST of Sed0007632.5 vs. TAIR 10
Match: AT5G02820.1 (Spo11/DNA topoisomerase VI, subunit A protein ) HSP 1 Score: 149.4 bits (376), Expect = 4.1e-36 Identity = 94/287 (32.75%), Postives = 159/287 (55.40%), Query Frame = 0
BLAST of Sed0007632.5 vs. TAIR 10
Match: AT3G13170.1 (Spo11/DNA topoisomerase VI, subunit A protein ) HSP 1 Score: 125.6 bits (314), Expect = 6.3e-29 Identity = 88/283 (31.10%), Postives = 152/283 (53.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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