Lsi11G001470 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G001470
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Oligouridylate-binding protein 1-like
Location	chr11: 1639159 .. 1646976 (-)
RNA-Seq Expression	Lsi11G001470
Synteny	Lsi11G001470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCTCGGATAATAGTCGAAGTGGCTATATATAAAAGGTTGTGAGCAGATCTGCTCTTACATTTACTCGAAAATTTATTTGTCTGAAGCTCTGTGTTGCGCTCGTCTTTCCTCTCTCTGCTCCCTCCCTTCGAGGGTTTTTCTTTTTCTTTCTTTTATTCTTTCCCCCCTCTTTCTTCTTTCTTCTTTCTTTTTTTGTTTTGTTTTTGTTTTTGTTTCTTCCATTTTCTTCGTTCTACAGCCCCCAATTCAAGATCTTCATCTCCTCCATCTCAATCTCACTATTCCTGTAAGATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTCTATATCCCCACCCGGGCCTCCTCGCTGCTCCTCAGGTTTCTACTTCTCTTATATTTTCAATTTTGTTTTTCGTTAGATTTGGTTGCAAGATATGTATCCTCTTCTGATCGATCCTTTATTCCTCAGTTTTTTATTACTCGAGGTTGGATCTCTCTCTCTCCCCAGCTATATTATTGAAATATGGCTTCCTTTTATCAATAAATGTTATATTGTTTTCATTTTTCCCAATTGTTTTAAATGGAAACAGGAAAGATTACATTAGAGAACTAAAAGCTCAATAGGTGATAAGATATCAATCCTAGAAAGTGAAATTAAAAAAAAAATCTTGGAAAGGAGCCTCGGGGATTCAAAAGGATTCCTCTAATTGGTATAAATAAATTATTATCAAGCCGACGAAAACACTTTCACGAGGAGCTATACCAAGATGTATTGTGTTGAATAGTACTCCATATGACCTCTTCCCAGTGTTGCGAAAACGTGTATGACTTCTTTTCAACCACAACTTCCAAGCCAAAGCTTCGATGCTTAGATACATGGCTATCGAGAAGTTGTTATAGATTTCCTACCGAGGTTAAACGCCTAGGGGTGTTTGGCCCACCGATTTTATAAGTTGGTGTTAAATAACCAACTTCAACGGTGTTTACTATTGAAGTTTGCACATTCATTGAAGAATTTCATCTCTCTTTCTTTTGCACATTTATCAAGAAACTCCGTTTTCTAACCTTGCACCCGAAACACAAATTTCCCAACTCCAACTTATTAACTTCAAATTTCAAAACTCAACTCAATGCCCCAAACATCTCCGAAAATAAGAAAACCAAAGCTCTTGAGTAGTTGAAAATAAGGAAATAGGTGGCTTTGGGTTTTAAAGTTCTCGTGACACAAAAGACAACCGTTAGGATCCAGGTTGAATATAACGCCCTAGGATTCGGAATCCGGATTCGGCAACTGATGACTCTGACATTCCCCTGCGACTCGTAAATGTAATCCTTGGTTGTCTTGAACTCTTTTAAGAGTGAAAGTTGTCCTCACAAACTAACACGGGTCCTTTCAACATGCTTTGTCCTCACTCACATGCATCCTAGGAAAATTCCCAGGAGGTGGTCACCCAACCTAGGATTGCTCCAGGCTAACCACGCTTAACTTTGGAGTCCAACGATTGAGTCACTGAAAAGGAAGATGCACTTTGTTGGTATAGGTAGTAACTTTCCGTTCTTTTAAACCTTTCTTAACCATACTTTCGTGTCCTCAGGATCCCTCTCATTCGGATGTGATCTCGGTTCATTCATGTCCTCCTCCTGAACTTGGGTTGTTACATTGAAAATTCATACATGATGTGCAGAGACTAATTTCCTGCCTAAATGAGAGAAGCACATGGACATTAGCCCAGTGTTCGTTGCCTTTTATCAAATTTAAAAACCATATGCTGTTTCCATGTTTTCTATGAGTTAGTCTTTTTCTTTTCCCCACTACTTCACTGACTGACCCATTTGTGCGCACATACATACATGATAAATTTTGCATGCTAATGGGTAGATGACATTCAATTAACTAGTTTTTGAGTTATCATCCTTGCTTTTCTTCTTGCATAAATTGTTGCCAATTATCATGCAAGTCTTAGGAGCCATCCAGATATTATTTACCTGTTGTCTTTGGTACCCTAAGTAAGAGACATCATCCAAATATTCGTTCAGAAATATGATTGCTAATGTATCAGTATCATATTCTTCCTTACATGGGCTTCCATGTCAAGTCCTTGAAGATTTCTTGCTGAAGAACATGAGTCAATTGGAGTCTTTTTCACCCTTGGACTGTAAAATTACCCGTTGCCAGTGCGTTCGAGTCTATCAGTGACTCTATTTTTACATAATCTTTTTCCACACATGGCCGGAATTTGGGTGAGGAGTGCAGATATGTTTTTCTAGGAAGATTTTGTTCTCCCCTTTTCCTTGTTTTTTACTTTTTTATTTTGCAGATAGAGCCTATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTACATGCCGCAGTGTGTGAGTGTTAAATAGATATTTTCTTTTCTTTTTTTTTTTTTTTTAATTTTTTTTAATTTTGTCATATAGTTTATTTTAACTTGAACATGGTAAAATGGAGTCTTGATTTGGATTAACTTGTATCTTTCTTGCCCTAGCTATAGGGTTCCTCATTGGTTTGGCATTTGTTGATTGATTTCCATTGACACTTCATATCATGTTCATCGTTTGCTAAAACTGATAACATTCTGGTTCGTATGTTGTTGGAATGAGTTCAAGTACACTGACTGCAGTTACATTATTTTTCATTTCTTGTTCTTAATAATCAATCAGTCTGAACTAATGGGAAAAATATAGGTATGTTGGAAACATTCATCCCCAAGTCACCGAGCCTCTACTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAGGAGAAGGTGTGGTTTTCGTATCGACTGTCATCTGTTGCTATATGATCTCTTTCCATTATGATAATAAGTACCATCAATTAATGGCTATTATATTTTGAGGAATATTTCTTCCTTCAGTTAACTAGTTGGTGGAATTATTTCAAATAATCCAGTGTTATTCACAGATCATGGTCTTCTTTGAATGTGTTTTTTTTGTTATATTGATACGACATTACCTGAGTAGAATTTGTTCTATAGGTTGTACAACTGCGTTCTTTTTTTGTTATATACATAGGAGCCGAGTTGCTGACCTTACATCCTAAGTTTTCTTCATCATCTTCTTTTTTATTTTATTTTTTTAAATTAAAGATTTATATATATATATATATTTATTTTTATGCAGTCATCCTATGGTTTTGTGGATTACTTTGATCGCAGATCGGCTGCAGTTTCTATTATTTCTCTCAATGGAAGAAACTTGTAAGTGAAGTTCTTTCTTGCATTTTTATTGACATTAACCGAATCATATATTTCAATACAATTTCGCACAGGTTTGGACAACCTATAAAAGTTAATTGGGCATATGCAAGTAGTCAGAGGGAAGACACATCTGGTTGTATGCTTAGATGGTTTCTTTTTCTTTTGATTCTGTTTCTGATGATGACAAGTATGTGGTATGCGGCTGCTGATATTTTTATATGGTGTTTTTCCCAGGTCATTTTAACATATTTGTTGGTGATCTCAGCCCTGAGGTTACTGATGCTACATTGTTTGCATGCTTTTCTGTTTACCCCAGTTGTTCGTAAGTTTATTCTCCAAATTTCTGTTTATGTGTCTGTCTGCTTGGCTTATGTTAAAATGTTTGGGATATGGTAGAGCGTAACTTAATGCTATGCAACTGAAAGCACCTTGTTCTAGCACCTCTTAACTTATCTTTCCTTAAATACTTCAGGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGTTCGAGGGGTTATGGTTTTGTTGCTTTTCGGAATGAGCAGGTTTTGGAATTGTTAAAAATTACAATATACCTTTTTCCCCTTCCTGAACACCACCCTTTTCCTACCAATATAGGAAGTCTTGATTTGCCTTCTTCAGATCATAGTTGTACTCCTGTTGATAGTTATTAATTCTGTTTTCAGGATGCTCAAACTGCAATTAATGACATAAATGGTATACCTACTCTCTCTCGTTTGGAAATCTTCTGTTGTATTTTCTTTTATCCATTTAGTGACCTGGCTAACCATATCATGTATCGAGCCATGCATGTAAGCAATGCAATGAGTAATGTCATTATTAGGGAAATGAAAAACAGAATAAGATTGTACCTTGGATAGAGATCCTGAAGTCCAGGCTAGATTCCTTGGTTCATATCAAAACAATCTGAAAAGTGTGACACATCTCTTTTAGGTCACACTTGTTAATAAAGTATGCATATCAGGTTCTAAGTTATTTTATTAACTGGACATCATTGTTGTGCAGTTTGGTGTTAAAAGAGTCATGAAGATCATTTCTTCTTGCTCACTTTTTGTGACATGAGTATTGTTGTTTCTTTTATTAGAAACTGTTCTATATGTATTTTTTTTCTGTTTTGACAATAAAGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCCACAAAAGGTGCTAGTTCTGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACATCTGGCACTTCAGGTATTTCATTAAGCGATATTTAACTGTGAGATTTTCAGCTTTAATAACCTTCATCGAATTCTATTATTTACCTTTTAAAAACTCTTATATTGATGGTTGCAAATCTTCCAAGGTTTCTACACGCATGATAGTTTTGGCTGTTGCATAGGGAGTATTTTCTTTTTGTTTGTCCAGGACTGAGGTTATTCATGTTGATCTATCTTTACACTCTTGACCCTTGACCTGTTTCTTGCCTATTCTTCTTCTATAATTATATCCGGCACGTGCATTAGGACTCTGGCCATATTGTATATAATTAAACCTACATTTTTTTGTCTAACGAGGGATGTATTGACCTTGAGGTCTGTATCTTGCTTGTTTATATTGAATAATCATTCCAAAATCTGCTCAGACATAATTATTCTTCAAGAGGTTCGTACTTCTTGTCAACATGAGTTGGTAAGTATAGTATAGGGGATGGATTTCATAAGCCCAAGTTTGTGTCTAACTTTGTAATCCCATGTTAAACAATTTTAACCTATGAGTTAAACCACCTCGTAATAACCTTGTGAATATCTTAGTGACTAACGTTTTGGGTTTTGATCTCTAATTTTGAATGCGACGATTGATTAAAATTTCTGGTTAATACAATCTCAATGTTGGTTCTGATCTCTATTACTTTACCCTACGAGTTAAACGACATCTTCTTCTTTCTTTTTCTTCTTAAAAAAAAATAAAAAATAAATAAACGACATCAAAATTTGAAGTACTTTGTGAATTTCTTAATAATATTGGGTTTTGATCTCTAATTTTGAATATGATGATTATGAATTTCAAAATTGATTGAAATTTCTGGTTAAATTTCGGAACAGTTCAACACAGGTAGGGTCAAACATACAATCTGAATGTTTTGGGTTCTGATCTCAATAACTTTACCCTATGAGTTAAACAACCCCAAAATTTCAAAAACCTTGTGAATTTCTTAAGGCCCGTTTGATAGGTAATTCAAATAGGCTTTAAGAAATTGATTATGTTTTATGTTTTTAGATTCATTGTGTTCAGCGAATATGCGTTTGTTAAGCAGTCTAGATTTTGTTTTTGAAAACTGTTTCCAAATTCTGTGATCCAAACAATGCAAATTCTGAAAACGACATTTTATATTTTTAGTATATCAAGATTTTGAATTTGAAATCTTAAAATGCAGAATTATATTAGAAAAGATAAAAATAATAACAAATATAGTATTTCATGTTGTAAACTCAATTATTTTTGTTTAGTTAAAATATGTCTTATATAATATGTTATTTATTCTATGTATTACAAAATAATAATTATACAAAATTTTTAACATAAAACAAGTGAATAAATTAATTAGTAATAGTTTATATTCAACCTAATATTTAGTGAGTAACTATAATTAGTTTTATGGTTTATAAATATAATTATTAAACACATATTGAAAAGTTGTTTAAATTGGAATTTAATTTTTGAATCTGCTACCGAACACATATCAGAAAACATGAAATACAATTCTGTTTATGTTAAATACCTTGTTTTCAAAATTTTGTTTTCAGATCGCCTACCAAACATGCTGTTAATGACTGATGTTTTGGGTTTTTTGATCTCTAATTTTGAATGTGACGGTTATGAATAATCCAAAATTGATTAAATTTCTGGTTAAATTTTTGAACAATCCAACACATGTAGGGTCAAACTTCAATCTCTTAGAGGAAGTAGGGATGTCTAAACCAATAGCTGGGCGTATAAGGGTGATGAATTGAATTTATTACCTCTTAGAGGAAGTAGGGATGTTTTTACCATTGAGCTATGTTTTTTTTTTTTTTTTTGGTTATGGATATCTAGTTATTTTTATCAGGAATTGGCATCAGTGAATGTTTTTCTTTGTTTGTTCTCATTGTCACCGTTCTCTGCAAACTGAATCCCTCTGATTAGACATTTATATTTTTGCCTTATTAGTTTTTCTTTCACAACATTGTCATGGCTGTTTTTGCAGAAGGCGGTCAAGAGAAATCCAATGAGGACGCACCTGAGAACAATCCTCAATACACAACCGTATATGTGGGAAATCTTGCTCCCGAGGCAAGGAAATTCTTTTGATGATATTATAGTAGCTAATATGCATAGTAATTGTTGAAACAGCTAACTTGGGTGAACCTGCAACTGGAGGGCTTGCCAAAGTTCTCTGCTATCTCTAAAGGCATAAGCATGAATGGTGATGGGATTCTAAAATTTATCTAAGAAACTTTGTGCTTTTTGTTGGATCTTTAGATTCTTTCATTTTTCTCCGTCAAAGCATTGTTTTCATAATATATAATCACACACACACACACACAATGTGTAGGACAAGCAATCCTTCCTTTTCACGACTGAAACCTGGATTAAAAGCATGCCAAGTTTGTCATGTTATAGCTCGATTCTATTAGGATTGCATCATTTTCAGTGTTTATTCGCTGCAGGTTACCTCAGTTGATCTCCACCGTTATTTTCATGCTCTTGGTGCCGGGACAATTGAAGATGTTAGGGTACAACGGGATAAAGGTTTTGGGTTTGTGAGATATAGCACTCATGCTGAAGCAGCTTTAGCCATCCAAATGGGCAATGCTAGAGTTGTCTGTGGCAAACCAATTAAGGTACAACCTTGATGAACAAATTTCAATTTTGTCCTATATGAATGTTAATTAATCATCATGTGAACTAGTTCTCAGTGCCAATATGTATTTCAACTAGGCTATTTTGGGTGGACTATTTAGGGTTGCGTGGAAGAGACTAACTGATTCTTATGGGTTAAGTAAATGCGGGTTCACAGGGAAAATTCATTATGCACGCCTGTAGGACTTGAATGTTCACTTAAAATCTTTTCATAATCAAATGCTGCAGTGTTCATGGGGTAGCAAGCCAACCCCGCCAGGGACTAATTCTACCCCTCTTCCTCCACCAAATGTGGGACACATGCCAGGTCTTTCTGCAGCCGACCTTGCTGCCTATGAACGACAAATGGCATTGAGCAAAATGGGTGCGGCGCAAGCGCTAATGCATCCACAGGCGGCTCAGCATGCCCTCAAGCAGGCAGCCATGGGAATGGGGATGGGAATTGGGATGGGTGGTGCTGGCACTAGTCAAACTATATATGATGGTGGGTTTCAAAATATTGCAACCACCCAACAGCTCATGTATTACTAGGTATTTGATGAAGTGTTGTGTATTGTATGATGCTTGTAGTTCATTTGTGGAACTAAAGAAGTTGCTGCGTTTTCAAATGTAGTGGTAGCCGGGGGGGG

mRNA sequence

CTTCTCTCGGATAATAGTCGAAGTGGCTATATATAAAAGGTTGTGAGCAGATCTGCTCTTACATTTACTCGAAAATTTATTTGTCTGAAGCTCTGTGTTGCGCTCGTCTTTCCTCTCTCTGCTCCCTCCCTTCGAGGGTTTTTCTTTTTCTTTCTTTTATTCTTTCCCCCCTCTTTCTTCTTTCTTCTTTCTTTTTTTGTTTTGTTTTTGTTTTTGTTTCTTCCATTTTCTTCGTTCTACAGCCCCCAATTCAAGATCTTCATCTCCTCCATCTCAATCTCACTATTCCTGTAAGATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTCTATATCCCCACCCGGGCCTCCTCGCTGCTCCTCAGATAGAGCCTATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTACATGCCGCAGTGTGTATGTTGGAAACATTCATCCCCAAGTCACCGAGCCTCTACTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAGGAGAAGTCATCCTATGGTTTTGTGGATTACTTTGATCGCAGATCGGCTGCAGTTTCTATTATTTCTCTCAATGGAAGAAACTTGTTTGGACAACCTATAAAAGTTAATTGGGCATATGCAAGTAGTCAGAGGGAAGACACATCTGGTTGTCATTTTAACATATTTGTTGGTGATCTCAGCCCTGAGGTTACTGATGCTACATTGTTTGCATGCTTTTCTGTTTACCCCAGTTGTTCGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGTTCGAGGGGTTATGGTTTTGTTGCTTTTCGGAATGAGCAGGATGCTCAAACTGCAATTAATGACATAAATGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCCACAAAAGGTGCTAGTTCTGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACATCTGGCACTTCAGAAGGCGGTCAAGAGAAATCCAATGAGGACGCACCTGAGAACAATCCTCAATACACAACCGTTACCTCAGTTGATCTCCACCGTTATTTTCATGCTCTTGGTGCCGGGACAATTGAAGATGTTAGGGTACAACGGGATAAAGGTTTTGGGTTTGTGAGATATAGCACTCATGCTGAAGCAGCTTTAGCCATCCAAATGGGCAATGCTAGAGTTGTCTGTGGCAAACCAATTAAGTGTTCATGGGGTAGCAAGCCAACCCCGCCAGGGACTAATTCTACCCCTCTTCCTCCACCAAATGTGGGACACATGCCAGGTCTTTCTGCAGCCGACCTTGCTGCCTATGAACGACAAATGGCATTGAGCAAAATGGGTGCGGCGCAAGCGCTAATGCATCCACAGGCGGCTCAGCATGCCCTCAAGCAGGCAGCCATGGGAATGGGGATGGGAATTGGGATGGGTGGTGCTGGCACTAGTCAAACTATATATGATGGTGGGTTTCAAAATATTGCAACCACCCAACAGCTCATGTATTACTAGGTATTTGATGAAGTGTTGTGTATTGTATGATGCTTGTAGTTCATTTGTGGAACTAAAGAAGTTGCTGCGTTTTCAAATGTAGTGGTAGCCGGGGGGGG

Coding sequence (CDS)

ATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTCTATATCCCCACCCGGGCCTCCTCGCTGCTCCTCAGATAGAGCCTATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTACATGCCGCAGTGTGTATGTTGGAAACATTCATCCCCAAGTCACCGAGCCTCTACTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAGGAGAAGTCATCCTATGGTTTTGTGGATTACTTTGATCGCAGATCGGCTGCAGTTTCTATTATTTCTCTCAATGGAAGAAACTTGTTTGGACAACCTATAAAAGTTAATTGGGCATATGCAAGTAGTCAGAGGGAAGACACATCTGGTTGTCATTTTAACATATTTGTTGGTGATCTCAGCCCTGAGGTTACTGATGCTACATTGTTTGCATGCTTTTCTGTTTACCCCAGTTGTTCGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGTTCGAGGGGTTATGGTTTTGTTGCTTTTCGGAATGAGCAGGATGCTCAAACTGCAATTAATGACATAAATGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCCACAAAAGGTGCTAGTTCTGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACATCTGGCACTTCAGAAGGCGGTCAAGAGAAATCCAATGAGGACGCACCTGAGAACAATCCTCAATACACAACCGTTACCTCAGTTGATCTCCACCGTTATTTTCATGCTCTTGGTGCCGGGACAATTGAAGATGTTAGGGTACAACGGGATAAAGGTTTTGGGTTTGTGAGATATAGCACTCATGCTGAAGCAGCTTTAGCCATCCAAATGGGCAATGCTAGAGTTGTCTGTGGCAAACCAATTAAGTGTTCATGGGGTAGCAAGCCAACCCCGCCAGGGACTAATTCTACCCCTCTTCCTCCACCAAATGTGGGACACATGCCAGGTCTTTCTGCAGCCGACCTTGCTGCCTATGAACGACAAATGGCATTGAGCAAAATGGGTGCGGCGCAAGCGCTAATGCATCCACAGGCGGCTCAGCATGCCCTCAAGCAGGCAGCCATGGGAATGGGGATGGGAATTGGGATGGGTGGTGCTGGCACTAGTCAAACTATATATGATGGTGGGTTTCAAAATATTGCAACCACCCAACAGCTCATGTATTACTAG

Protein sequence

MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYASSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEKSNEDAPENNPQYTTVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQMALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY

Homology

[Close]

BLAST of Lsi11G001470 vs. ExPASy Swiss-Prot
Match: Q9M427 (Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE=2 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 1.3e-176
Identity = 320/425 (75.29%), Postives = 361/425 (84.94%), Query Frame = 0


Query: 1   MQYQRLR---QQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQV 60
           MQ QRL+   QQA+MQQSLY HPGLLA PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQV
Sbjct: 2   MQQQRLKQQQQQALMQQSLY-HPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQV 61

Query: 61  TEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNW 120
           TEPLLQEVF+S GP+EGCKLIRK+KSSYGFVDYFDRRSAA++I++LNGR+LFGQPIKVNW
Sbjct: 62  TEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNW 121

Query: 121 AYASSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGF 180
           AYAS+QREDTS  H+NIFVGDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRG+GF
Sbjct: 122 AYASAQREDTSN-HYNIFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGF 181

Query: 181 VAFRNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGG 240
           V+FRN+Q+AQ+AIND+NGKWLGSRQIRCNWA KGA +  + Q+SD++SVVELTSGTS+ G
Sbjct: 182 VSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAVGE-QNSDAKSVVELTSGTSDDG 241

Query: 241 QEK-SNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVR 300
           QEK  NEDAPENNPQYTT         VTSVDLHR+FHALGAG IEDVR+QRDKGFGFVR
Sbjct: 242 QEKVVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFVR 301

Query: 301 YSTHAEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAA 360
           YS+HAEAA AIQ+GNAR++ GKP+KCSWGSKPTPPG++S PLPPP +G +PGLSA DLAA
Sbjct: 302 YSSHAEAARAIQLGNARLLFGKPVKCSWGSKPTPPGSSSNPLPPPAIGQIPGLSAMDLAA 361

Query: 361 YERQMALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQ 413
           Y+RQ+AL+KM  AQA M PQ             G  IG  G G    IYDGG+  IA+TQ
Sbjct: 362 YQRQLALAKMAGAQAFMQPQ-------------GQRIGAPGQG----IYDGGYGGIASTQ 406

[Close]

BLAST of Lsi11G001470 vs. ExPASy Swiss-Prot
Match: Q9LQI9 (Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 3.2e-170
Identity = 306/421 (72.68%), Postives = 342/421 (81.24%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPL 61
           Q Q + QQA+MQQ    HPGLLA PQIEPI SGNLPPGFD STCRSVYVGNIH QVTEPL
Sbjct: 10  QQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPL 69

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYAS 121
           LQEVF+  GP+E CKLIRKEKSSYGFV YFDRRSA ++I+SLNGR+LFGQPIKVNWAYAS
Sbjct: 70  LQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYAS 129

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 130 GQREDTSS-HFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFR 189

Query: 182 NEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEKS 241
           N+QDAQTAI++I GKWLGSRQIRCNWATKGA+SG+DKQSSDS+SVVELTSG SE G++ +
Sbjct: 190 NQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTT 249

Query: 242 NEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 301
           N +APENN QYTT         V+ VDLHR+FH+LGAG IE+VRVQRDKGFGFVRYSTH 
Sbjct: 250 NGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHV 309

Query: 302 EAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 361
           EAALAIQMGN    + G+ +KCSWGSKPTP GT S PLPPP    +PG SA+DL AYERQ
Sbjct: 310 EAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQ 369

Query: 362 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           +A+SKM     +MH    QHA KQAA        MG  G++Q IYDGG+QN    QQLMY
Sbjct: 370 LAMSKMAGMNPMMHHPQGQHAFKQAA--------MGATGSNQAIYDGGYQN---AQQLMY 418

[Close]

BLAST of Lsi11G001470 vs. ExPASy Swiss-Prot
Match: Q9LJH8 (Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 8.6e-168
Identity = 300/421 (71.26%), Postives = 344/421 (81.71%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPL 61
           Q   ++QQA+MQQ    HPG+LA PQ+EP+ SGNLPPGFD STCRSVYVGNIH QVTEPL
Sbjct: 15  QQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPL 74

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYAS 121
           LQE+F+S GP+E  KLIRK+KSSYGFV YFDRRSAA++I+SLNGR+LFGQPIKVNWAYA+
Sbjct: 75  LQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYAT 134

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDATL+  FSV+ SCSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 135 GQREDTSS-HFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFR 194

Query: 182 NEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEKS 241
           N+QDAQTAIN++NGKWL SRQIRCNWATKGA+SGDDK SSD +SVVELT+G+SE G+E  
Sbjct: 195 NQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETL 254

Query: 242 NEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 301
           NE+ PENN Q+TT         VT +DLHRYFHALGAG IE+VRVQRDKGFGFVRY+TH 
Sbjct: 255 NEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHP 314

Query: 302 EAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 361
           EAALAIQMGN +  +  + IKCSWG+KPTPPGT S PLPPP    +PGLSAADL  YERQ
Sbjct: 315 EAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQ 374

Query: 362 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           +ALSKM +  ALMH Q  QH L+QA        G+  AG +  +YDGGFQN+A  QQLMY
Sbjct: 375 LALSKMASVNALMH-QQGQHPLRQAH-------GINAAGATAAMYDGGFQNVAAAQQLMY 426

[Close]

BLAST of Lsi11G001470 vs. ExPASy Swiss-Prot
Match: Q9SYG4 (Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 1.6e-158
Identity = 290/422 (68.72%), Postives = 342/422 (81.04%), Query Frame = 0


Query: 4   QRLRQQAMMQQ--SLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPL 63
           Q + QQAMMQQ  SLY HPG++A PQ+EP+ SGNLPPGFD +TCRSVY GNIH QVTE L
Sbjct: 20  QAMIQQAMMQQHPSLY-HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEIL 79

Query: 64  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYAS 123
           LQE+F+S GPIE CKLIRK+KSSYGFV YFDRR A+++I++LNGR++FGQP+KVNWAYA+
Sbjct: 80  LQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYAT 139

Query: 124 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 183
            QREDTS  HFNIFVGDLSPEVTDA LF  FS + SCSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 140 GQREDTSS-HFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFR 199

Query: 184 NEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEKS 243
           N+QDAQTAIN++NGKW+ SRQIRCNWATKGA+ G+DK SSD +SVVELT+G+SE G+E S
Sbjct: 200 NQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELS 259

Query: 244 NEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 303
           NEDAPENNPQ+TT         VT +DLHR F+ LGAG IE+VRVQRDKGFGFVRY+TH 
Sbjct: 260 NEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHD 319

Query: 304 EAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 363
           EAALAIQMGNA+  +  + I+CSWG+KPTP GT S PLPPP    +P LSA DL AYERQ
Sbjct: 320 EAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQ 379

Query: 364 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATT-QQLM 413
           +AL+K       MHPQ AQH+L+QA      G+G+  AG +  +YDGG+QN+A   QQLM
Sbjct: 380 LALAK-------MHPQ-AQHSLRQA------GLGVNVAGGTAAMYDGGYQNVAAAHQQLM 425

[Close]

BLAST of Lsi11G001470 vs. ExPASy Swiss-Prot
Match: Q6YZW2 (RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.1e-135
Identity = 264/439 (60.14%), Postives = 320/439 (72.89%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPGLLAA------PQIEPILSGNLPPGFDSSTCRSVYVGNIHP 61
           Q   L QQA+ QQ  Y   G+LAA       Q+EPI +GNLPPGFD STCRSVYVGN+HP
Sbjct: 24  QQALLMQQALQQQQQY-QSGVLAAAAAAAMTQMEPISNGNLPPGFDPSTCRSVYVGNVHP 83

Query: 62  QVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKV 121
            VTE LL EVF S G +E CKLIRKEKSS+GFVDY+DRRSAA++I++L+GR++ GQ IKV
Sbjct: 84  NVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGRHICGQAIKV 143

Query: 122 NWAYASSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGY 181
           NWAYAS+QREDTSG HF+IFVGDLS EV DATL+ACFS YPSCSDARVMWD KTGRSRGY
Sbjct: 144 NWAYASTQREDTSG-HFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGY 203

Query: 182 GFVAFRNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTS- 241
           GFV+FRN+Q+A+TAI ++ GKWLGSRQIRCNWATK  ++ ++KQ +D+ + V LT+G+S 
Sbjct: 204 GFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK--NNAEEKQETDNHNAVVLTNGSSS 263

Query: 242 ----EGGQEKSNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDK 301
               E  Q+  +++ PENNP  TT         V   +LHR+F+ LG G IE+VRVQ+DK
Sbjct: 264 NPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDK 323

Query: 302 GFGFVRYSTHAEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMP--- 361
           GFGFVRYS H EAALAIQM N  VV GKPIKCSWG+KPTPPGT+S PLPPP   + P   
Sbjct: 324 GFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPTPPGTSSKPLPPPLPSYQPVPM 383

Query: 362 -----GLSAADLAAYERQMALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQ 413
                G SAAD+ AY+RQ+ LS++ A Q      A QH L        +  G+  AG SQ
Sbjct: 384 AGVPQGFSAADIVAYQRQLTLSQVAAGQI-----AGQHGLAGQ-----VSAGLLAAG-SQ 443

[Close]

BLAST of Lsi11G001470 vs. ExPASy TrEMBL
Match: A0A5A7V704 (Oligouridylate-binding protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00040 PE=4 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 4.7e-233
Identity = 406/414 (98.07%), Postives = 410/414 (99.03%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTSGTS+GGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEK 240

Query: 241 SNEDAPENNPQYTT--VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHAEAALAI 300
           SNEDAPENNPQYTT  VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHAEAALAI
Sbjct: 241 SNEDAPENNPQYTTVYVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHAEAALAI 300

Query: 301 QMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQMALSKMG 360
           Q GNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLA+YERQMA SKMG
Sbjct: 301 QTGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLASYERQMAFSKMG 360

Query: 361 AAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY 413
           AAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY
Sbjct: 361 AAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY 414

[Close]

BLAST of Lsi11G001470 vs. ExPASy TrEMBL
Match: A0A5D3CHT1 (Oligouridylate-binding protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001510 PE=4 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 8.2e-230
Identity = 405/421 (96.20%), Postives = 409/421 (97.15%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTSGTS+GGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEK 240

Query: 241 SNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300
           SNEDAPENNPQYTT         VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH
Sbjct: 241 SNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300

Query: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360
           AEAALAIQ GNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLA+YERQ
Sbjct: 301 AEAALAIQTGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLASYERQ 360

Query: 361 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           MA SKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY
Sbjct: 361 MAFSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 420

[Close]

BLAST of Lsi11G001470 vs. ExPASy TrEMBL
Match: A0A1S3CBS9 (oligouridylate-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103498989 PE=4 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 8.2e-230
Identity = 405/421 (96.20%), Postives = 409/421 (97.15%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTSGTS+GGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEK 240

Query: 241 SNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300
           SNEDAPENNPQYTT         VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH
Sbjct: 241 SNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300

Query: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360
           AEAALAIQ GNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLA+YERQ
Sbjct: 301 AEAALAIQTGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLASYERQ 360

Query: 361 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           MA SKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY
Sbjct: 361 MAFSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 420

[Close]

BLAST of Lsi11G001470 vs. ExPASy TrEMBL
Match: A0A6J1DM61 (oligouridylate-binding protein 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021846 PE=4 SV=1)

HSP 1 Score: 805.4 bits (2079), Expect = 1.1e-229
Identity = 404/421 (95.96%), Postives = 410/421 (97.39%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAV+IISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELT+GTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300
           SNE+APENNPQYTT         VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300

Query: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360
           AEAALAIQMGNARV+CGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ
Sbjct: 301 AEAALAIQMGNARVLCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360

Query: 361 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           M LSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY
Sbjct: 361 MTLSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 420

[Close]

BLAST of Lsi11G001470 vs. ExPASy TrEMBL
Match: A0A0A0LFH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000020 PE=4 SV=1)

HSP 1 Score: 800.0 bits (2065), Expect = 4.5e-228
Identity = 403/421 (95.72%), Postives = 409/421 (97.15%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTSGTS+GGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEK 240

Query: 241 SNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300
           SNEDAPENNPQYTT         VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYST+
Sbjct: 241 SNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTN 300

Query: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360
           AEAALAIQ GNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGH+ GLSAADLA+YERQ
Sbjct: 301 AEAALAIQTGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHISGLSAADLASYERQ 360

Query: 361 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY
Sbjct: 361 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 420

[Close]

BLAST of Lsi11G001470 vs. NCBI nr
Match: KAA0061449.1 (oligouridylate-binding protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 816.6 bits (2108), Expect = 9.6e-233
Identity = 406/414 (98.07%), Postives = 410/414 (99.03%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTSGTS+GGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEK 240

Query: 241 SNEDAPENNPQYTT--VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHAEAALAI 300
           SNEDAPENNPQYTT  VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHAEAALAI
Sbjct: 241 SNEDAPENNPQYTTVYVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHAEAALAI 300

Query: 301 QMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQMALSKMG 360
           Q GNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLA+YERQMA SKMG
Sbjct: 301 QTGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLASYERQMAFSKMG 360

Query: 361 AAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY 413
           AAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY
Sbjct: 361 AAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMYY 414

[Close]

BLAST of Lsi11G001470 vs. NCBI nr
Match: XP_038889890.1 (oligouridylate-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 807.0 bits (2083), Expect = 7.6e-230
Identity = 406/421 (96.44%), Postives = 410/421 (97.39%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTSGTS+GGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEK 240

Query: 241 SNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300
           SNEDAPENNPQYTT         VTSVDLHRYFHALGAG IEDVRVQRDKGFGFVRYSTH
Sbjct: 241 SNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGIIEDVRVQRDKGFGFVRYSTH 300

Query: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360
           AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ
Sbjct: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360

Query: 361 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           MALSKMGAAQAL+HPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY
Sbjct: 361 MALSKMGAAQALIHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 420

[Close]

BLAST of Lsi11G001470 vs. NCBI nr
Match: XP_008460071.1 (PREDICTED: oligouridylate-binding protein 1-like [Cucumis melo] >TYK10832.1 oligouridylate-binding protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 805.8 bits (2080), Expect = 1.7e-229
Identity = 405/421 (96.20%), Postives = 409/421 (97.15%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTSGTS+GGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEK 240

Query: 241 SNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300
           SNEDAPENNPQYTT         VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH
Sbjct: 241 SNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300

Query: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360
           AEAALAIQ GNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLA+YERQ
Sbjct: 301 AEAALAIQTGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLASYERQ 360

Query: 361 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           MA SKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY
Sbjct: 361 MAFSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 420

[Close]

BLAST of Lsi11G001470 vs. NCBI nr
Match: XP_022154627.1 (oligouridylate-binding protein 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 805.4 bits (2079), Expect = 2.2e-229
Identity = 404/421 (95.96%), Postives = 410/421 (97.39%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAV+IISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELT+GTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300
           SNE+APENNPQYTT         VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300

Query: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360
           AEAALAIQMGNARV+CGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ
Sbjct: 301 AEAALAIQMGNARVLCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360

Query: 361 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           M LSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY
Sbjct: 361 MTLSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 420

[Close]

BLAST of Lsi11G001470 vs. NCBI nr
Match: XP_022965399.1 (oligouridylate-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 796.2 bits (2055), Expect = 1.3e-226
Identity = 399/421 (94.77%), Postives = 406/421 (96.44%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSS CRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAV+IISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEK 240
           RNEQDAQ+AINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELT+GTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTH 300
           SNE+APENNPQYTT         VTSVDLHRYFH LGAGTIEDVRVQRDKGFGFVRY TH
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPEVTSVDLHRYFHTLGAGTIEDVRVQRDKGFGFVRYGTH 300

Query: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 360
           AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNS PLPPPNVGHMPGLSAADLAAYERQ
Sbjct: 301 AEAALAIQMGNARVVCGKPIKCSWGSKPTPPGTNSAPLPPPNVGHMPGLSAADLAAYERQ 360

Query: 361 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           MALSKMGAA+ALMHPQAAQHALKQAAMGMGMGIG+GGAGTSQT+YD GFQNIATTQQLMY
Sbjct: 361 MALSKMGAARALMHPQAAQHALKQAAMGMGMGIGIGGAGTSQTLYDSGFQNIATTQQLMY 420

[Close]

BLAST of Lsi11G001470 vs. TAIR 10
Match: AT1G17370.1 (oligouridylate binding protein 1B )

HSP 1 Score: 599.4 bits (1544), Expect = 2.2e-171
Identity = 306/421 (72.68%), Postives = 342/421 (81.24%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPL 61
           Q Q + QQA+MQQ    HPGLLA PQIEPI SGNLPPGFD STCRSVYVGNIH QVTEPL
Sbjct: 10  QQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPL 69

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYAS 121
           LQEVF+  GP+E CKLIRKEKSSYGFV YFDRRSA ++I+SLNGR+LFGQPIKVNWAYAS
Sbjct: 70  LQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYAS 129

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 130 GQREDTSS-HFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFR 189

Query: 182 NEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEKS 241
           N+QDAQTAI++I GKWLGSRQIRCNWATKGA+SG+DKQSSDS+SVVELTSG SE G++ +
Sbjct: 190 NQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTT 249

Query: 242 NEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 301
           N +APENN QYTT         V+ VDLHR+FH+LGAG IE+VRVQRDKGFGFVRYSTH 
Sbjct: 250 NGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHV 309

Query: 302 EAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 361
           EAALAIQMGN    + G+ +KCSWGSKPTP GT S PLPPP    +PG SA+DL AYERQ
Sbjct: 310 EAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQ 369

Query: 362 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           +A+SKM     +MH    QHA KQAA        MG  G++Q IYDGG+QN    QQLMY
Sbjct: 370 LAMSKMAGMNPMMHHPQGQHAFKQAA--------MGATGSNQAIYDGGYQN---AQQLMY 418

[Close]

BLAST of Lsi11G001470 vs. TAIR 10
Match: AT1G17370.2 (oligouridylate binding protein 1B )

HSP 1 Score: 591.3 bits (1523), Expect = 6.1e-169
Identity = 304/421 (72.21%), Postives = 340/421 (80.76%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPL 61
           Q Q + QQA+MQQ    HPGLLA PQIEPI SGNLPPGFD STCRSVYVGNIH QVTEPL
Sbjct: 10  QQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPL 69

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYAS 121
           LQEVF+  GP+E CKLIRKEKSSYGFV YFDRRSA ++I+SLNGR+LFGQPIKVNWAYAS
Sbjct: 70  LQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYAS 129

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 130 GQREDTSS-HFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFR 189

Query: 182 NEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEKS 241
           N+QDAQTAI++I GKWLGSRQIRCNWATKGA+SG+DKQSSDS+SVVELTSG    G++ +
Sbjct: 190 NQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG---DGKDTT 249

Query: 242 NEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 301
           N +APENN QYTT         V+ VDLHR+FH+LGAG IE+VRVQRDKGFGFVRYSTH 
Sbjct: 250 NGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHV 309

Query: 302 EAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 361
           EAALAIQMGN    + G+ +KCSWGSKPTP GT S PLPPP    +PG SA+DL AYERQ
Sbjct: 310 EAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQ 369

Query: 362 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           +A+SKM     +MH    QHA KQAA        MG  G++Q IYDGG+QN    QQLMY
Sbjct: 370 LAMSKMAGMNPMMHHPQGQHAFKQAA--------MGATGSNQAIYDGGYQN---AQQLMY 415

[Close]

BLAST of Lsi11G001470 vs. TAIR 10
Match: AT3G14100.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 591.3 bits (1523), Expect = 6.1e-169
Identity = 300/421 (71.26%), Postives = 344/421 (81.71%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPL 61
           Q   ++QQA+MQQ    HPG+LA PQ+EP+ SGNLPPGFD STCRSVYVGNIH QVTEPL
Sbjct: 15  QQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPL 74

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYAS 121
           LQE+F+S GP+E  KLIRK+KSSYGFV YFDRRSAA++I+SLNGR+LFGQPIKVNWAYA+
Sbjct: 75  LQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYAT 134

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDATL+  FSV+ SCSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 135 GQREDTSS-HFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFR 194

Query: 182 NEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEKS 241
           N+QDAQTAIN++NGKWL SRQIRCNWATKGA+SGDDK SSD +SVVELT+G+SE G+E  
Sbjct: 195 NQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETL 254

Query: 242 NEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 301
           NE+ PENN Q+TT         VT +DLHRYFHALGAG IE+VRVQRDKGFGFVRY+TH 
Sbjct: 255 NEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHP 314

Query: 302 EAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 361
           EAALAIQMGN +  +  + IKCSWG+KPTPPGT S PLPPP    +PGLSAADL  YERQ
Sbjct: 315 EAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQ 374

Query: 362 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATTQQLMY 413
           +ALSKM +  ALMH Q  QH L+QA        G+  AG +  +YDGGFQN+A  QQLMY
Sbjct: 375 LALSKMASVNALMH-QQGQHPLRQAH-------GINAAGATAAMYDGGFQNVAAAQQLMY 426

[Close]

BLAST of Lsi11G001470 vs. TAIR 10
Match: AT1G54080.1 (oligouridylate-binding protein 1A )

HSP 1 Score: 560.5 bits (1443), Expect = 1.2e-159
Identity = 290/422 (68.72%), Postives = 342/422 (81.04%), Query Frame = 0


Query: 4   QRLRQQAMMQQ--SLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPL 63
           Q + QQAMMQQ  SLY HPG++A PQ+EP+ SGNLPPGFD +TCRSVY GNIH QVTE L
Sbjct: 20  QAMIQQAMMQQHPSLY-HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEIL 79

Query: 64  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYAS 123
           LQE+F+S GPIE CKLIRK+KSSYGFV YFDRR A+++I++LNGR++FGQP+KVNWAYA+
Sbjct: 80  LQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYAT 139

Query: 124 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 183
            QREDTS  HFNIFVGDLSPEVTDA LF  FS + SCSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 140 GQREDTSS-HFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFR 199

Query: 184 NEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGGQEKS 243
           N+QDAQTAIN++NGKW+ SRQIRCNWATKGA+ G+DK SSD +SVVELT+G+SE G+E S
Sbjct: 200 NQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELS 259

Query: 244 NEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTHA 303
           NEDAPENNPQ+TT         VT +DLHR F+ LGAG IE+VRVQRDKGFGFVRY+TH 
Sbjct: 260 NEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHD 319

Query: 304 EAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAAYERQ 363
           EAALAIQMGNA+  +  + I+CSWG+KPTP GT S PLPPP    +P LSA DL AYERQ
Sbjct: 320 EAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQ 379

Query: 364 MALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATT-QQLM 413
           +AL+K       MHPQ AQH+L+QA      G+G+  AG +  +YDGG+QN+A   QQLM
Sbjct: 380 LALAK-------MHPQ-AQHSLRQA------GLGVNVAGGTAAMYDGGYQNVAAAHQQLM 425

[Close]

BLAST of Lsi11G001470 vs. TAIR 10
Match: AT1G54080.2 (oligouridylate-binding protein 1A )

HSP 1 Score: 554.7 bits (1428), Expect = 6.3e-158
Identity = 290/426 (68.08%), Postives = 342/426 (80.28%), Query Frame = 0


Query: 4   QRLRQQAMMQQ--SLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPL 63
           Q + QQAMMQQ  SLY HPG++A PQ+EP+ SGNLPPGFD +TCRSVY GNIH QVTE L
Sbjct: 20  QAMIQQAMMQQHPSLY-HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEIL 79

Query: 64  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYAS 123
           LQE+F+S GPIE CKLIRK+KSSYGFV YFDRR A+++I++LNGR++FGQP+KVNWAYA+
Sbjct: 80  LQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYAT 139

Query: 124 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCS----DARVMWDQKTGRSRGYGF 183
            QREDTS  HFNIFVGDLSPEVTDA LF  FS + SCS    DARVMWDQKTGRSRG+GF
Sbjct: 140 GQREDTSS-HFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGF 199

Query: 184 VAFRNEQDAQTAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTSGTSEGG 243
           V+FRN+QDAQTAIN++NGKW+ SRQIRCNWATKGA+ G+DK SSD +SVVELT+G+SE G
Sbjct: 200 VSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDG 259

Query: 244 QEKSNEDAPENNPQYTT---------VTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRY 303
           +E SNEDAPENNPQ+TT         VT +DLHR F+ LGAG IE+VRVQRDKGFGFVRY
Sbjct: 260 RELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRY 319

Query: 304 STHAEAALAIQMGNAR-VVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHMPGLSAADLAA 363
           +TH EAALAIQMGNA+  +  + I+CSWG+KPTP GT S PLPPP    +P LSA DL A
Sbjct: 320 NTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLA 379

Query: 364 YERQMALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYDGGFQNIATT- 413
           YERQ+AL+K       MHPQ AQH+L+QA      G+G+  AG +  +YDGG+QN+A   
Sbjct: 380 YERQLALAK-------MHPQ-AQHSLRQA------GLGVNVAGGTAAMYDGGYQNVAAAH 429

The following BLAST results are available for this feature:

BLAST of Lsi11G001470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M427	1.3e-176	75.29	Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE...	[more]
Q9LQI9	3.2e-170	72.68	Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 ...	[more]
Q9LJH8	8.6e-168	71.26	Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 ...	[more]
Q9SYG4	1.6e-158	68.72	Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 ...	[more]
Q6YZW2	1.1e-135	60.14	RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1...	[more]

BLAST of Lsi11G001470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V704	4.7e-233	98.07	Oligouridylate-binding protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3CHT1	8.2e-230	96.20	Oligouridylate-binding protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CBS9	8.2e-230	96.20	oligouridylate-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103498989 PE...	[more]
A0A6J1DM61	1.1e-229	95.96	oligouridylate-binding protein 1-like isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A0A0LFH4	4.5e-228	95.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000020 PE=4 SV=1	[more]

BLAST of Lsi11G001470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061449.1	9.6e-233	98.07	oligouridylate-binding protein 1-like [Cucumis melo var. makuwa]	[more]
XP_038889890.1	7.6e-230	96.44	oligouridylate-binding protein 1-like [Benincasa hispida]	[more]
XP_008460071.1	1.7e-229	96.20	PREDICTED: oligouridylate-binding protein 1-like [Cucumis melo] >TYK10832.1 olig...	[more]
XP_022154627.1	2.2e-229	95.96	oligouridylate-binding protein 1-like isoform X2 [Momordica charantia]	[more]
XP_022965399.1	1.3e-226	94.77	oligouridylate-binding protein 1-like [Cucurbita maxima]	[more]

BLAST of Lsi11G001470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17370.1	2.2e-171	72.68	oligouridylate binding protein 1B	[more]
AT1G17370.2	6.1e-169	72.21	oligouridylate binding protein 1B	[more]
AT3G14100.1	6.1e-169	71.26	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G54080.1	1.2e-159	68.72	oligouridylate-binding protein 1A	[more]
AT1G54080.2	6.3e-158	68.08	oligouridylate-binding protein 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 47..116 e-value: 1.5E-16 score: 71.0 coord: 133..206 e-value: 2.3E-23 score: 93.6 coord: 252..314 e-value: 2.9E-5 score: 33.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 134..204 e-value: 1.1E-17 score: 63.6 coord: 48..114 e-value: 1.0E-13 score: 50.9 coord: 255..312 e-value: 2.2E-6 score: 27.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 248..318 score: 11.008294
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 46..120 score: 15.238032
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 132..210 score: 17.199404
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 133..206 e-value: 5.0E-5 score: 32.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 237..322 e-value: 1.2E-14 score: 56.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..131 e-value: 3.1E-21 score: 77.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 132..211 e-value: 1.2E-24 score: 88.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..252
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 4..397
None	No IPR available	PANTHER	PTHR47640:SF40	NUCLEOLYSIN TIAR-LIKE PROTEIN	coord: 4..397
None	No IPR available	CDD	cd12619	RRM2_PUB1	coord: 133..207 e-value: 1.68291E-52 score: 168.07
None	No IPR available	CDD	cd12352	RRM1_TIA1_like	coord: 48..118 e-value: 1.37257E-37 score: 128.96
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 45..211
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 254..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G001470.1	Lsi11G001470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding