Lsi11G000730 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGTGCAACAGCTGCAAAATTAGCCTCCATATATTAATGGCCGCCGCAGCTCCTAATGAGTCGTCTCCACAAGCCACTGCGGCTTCTCGAAAGGTGTTGATCACTGGCGTTAGCAAAGGATTGGGAAGAGCTTTAGCCTTAGAGATGGCTAGCCGTGGCCACACCATCATCGGTTGCTCACGTGATCAAACTAAACTTCATTCTCTTCAAGTTAAGCTTTCCAAGTTATCAACAAATTACCATTTCCTCTTCAAAGTCGACGTGGTTGGTAATTAAGTGCTTTTACGTCAACTAGTTTGAGTTGAGGTTAATATTTATATGAATATATATACCTTTTAATTAAATTTAAATAGTAATTACATGACATGAAATTTAATAGTTATAATAAAAGATATAATGGATAGGACTATATATATTGTGTGTGTTTTGTTTGGTTAATTTATAATAAATATGAAATGTGTTGGATGCAATTTAAATCTTTTAAACACAATTTTTTAAGGTGAAATATTAATGATGGAACGAATATTATGTTTATTGATTTAAAATTGTAAATATTGGATATAAAGTTTAAAAGTAATAGAACAGATAAAATAAAGTAATATATTTTGATTAGAATTTTAAATGTTGTCAAGTAAAATGAAATTAGACATTAAGCACATTTTTTTCAAAGATAAAAGGTGAAAAGATGAAAAAAAAAAAAGAAAGAAAAAGAAAAAAAATATTGTAGTTATTTTAGGAAGGGATTTGTATTGTATATCTGTTAATATTTTTACTTTACTAATCCTCCTTTATTAATGAAAAAACTAAGAGGCTCTATGAAGAAAGAAAAAAACTAAATGAGTACAAAAATAATATGAGGACACAAAATAGAAATTATTGAAAAATTTAATGACAAAAAAGGAATGAAAAAAATTGGAAAGAGAGAGAGAAAAGAAGAAAAGGTATAAAAGGTATGTATAAAACAAAAGGATGAGATTTTGAGAGTAAAATAGTAATTAAAGAAAAGTTTAAGGGCCAAGACAGAAGTTAAAAATTCTCCTCTCATAACCCCTTTTAATATAGATATAGATATAGATATAGATATGAAATTTCATATCTTAAAGCCAATTGACAACAAAAGGAGTGTCATGTGTATTTTTTAGAGATTGTGAGGTACTCTTCTTCAACGTGCATGTGTGTGATCCCATTTTTTTATTTTTTATTTTCAAAAAATGAAATACTTGTTTGGACTTCATGAACTCTAATACCATATTAGATAAAGTTTTATCTCAAAGCTAGCTTATTGATGATGAGAAGAGTAATTCATGTATCTTGTAAAGATTGTAAAGTCTTCTCATCTTTTTCAATCTAGTATTATTTCAAGCGTAGAAAAAAAAAACAAAAAAAAAGTGATTAGAAGTGTATATTTTATAGCGATCGGACAAGAATGTTGAAGAAGTAGCACAAAAGGTTGTGGAAAAGAAACTTGTTCCTGATATCATTGGTATATATTTGCATCCCTTATTTCCTTAATTTCCTATAATTGGAAAAGGTAATTAGAACTTACATAACATTTTTGGGTTGGTATGATAGTGAATAATGCAGGTGTGGCTCATAGAAATGCAAAGCTATGGGAGCTTAATGCAGAAGATTTTAATAATGTGATTGATACTAATATAAAAGGAACATCAAATATTCTACGTCATTTCATTCCACTTATGATTCCTAACAAACAAGGAATTATCGTCAATATTTCATCACGTGCTGGAAGAGATGTTTGTGCTGACGTACGTACGTTCCACCTCTATTAACATATCATATTTATATATCTAATTTTATATTTTTTCTTCATTTTATCTATGTTTAAAAAAGGTGATCAAACTTTTTAATAGGGAGTTAGAGAGGTGTCTTGCTTTCTTAAAGTTAAAGGTTATCATTGAGAATATTCTTTTTGTTGGAAATACTGTTAATGTAGTTCATTGTTGTCACGGTCTTGGAGAGGAGAACAAATCTGCCTATATTATCATAGCTTTGTGATCCTCTCTAGGTTGTTCTTTGAACTAAAAAGCTATTTTTCCAGAGAGCATTCTACCCCTCTTTCGTGAATTAGAAATGTGTTTTTTTATATAGTTGGTTGTGGTTTGTTTTGCTTGGCGTCCTCTTGTCTTTTAAAAAAAAAAGCATTTTGTCAACCGACATTCATTAGATTTTTTATATGTAACAATTTTCTTAAATTGGAGTTATCATTGAGAATATTTTTTTTTGTTGGGAATATTGTTAATGTAATTTATTGTTGTCACATTCTTAGAGAGGAGAACAAATCTGCTCATGTTATTGCAGTTTTGACATTCTCTCAAAATTGGTCTTTGAACTGAAAAGATGTTTTTCCGATAACATATTATTCTTCCCCTTTTTTTGTGAAGAGGTGCTTAGAGATTGAGTAGTTGGTTGTGAATTTATTTATCTTGTCTAAAAAAATGCATTTGGTCAACCGACATTCATTGAATTAACAATTTAATTTTTTTTATATATATTGAAATTTGTAATATTGTAGTATTTATTATGAAAAGTATTATCAAGCTGAGTTATTGATTTTTTATATATAACAATTTTATTTCAAACTTATGATGATATTTTTAGTCTATACCTAGTTTATCGATCGATGTTATAAAGCTTTAACAACTAAATTGTTACAAATGCAATTACTAAAATTTGATTGAAATTTGAAAGTATAATGATATCATCTATTTGTGTGGGGGTAATTTGCAGCTAGGAGCATATTGTGCATCGAAATGGGCAATTGAGGGATTAAGCAAATGTATTGCAAAAGGACTACCAGAGGAAATGACAATAGTGGCCTTAGATCCTGGTACTATTTACACAGACATGCTCATTTTATGCCTCCCTGATATTGGAACCACACCATTTCATTTTCAATCACCTCAAAAATGGTATGGATTCTCATCACTATTTTGCTACTTTATCATTGTCATGTCATATACAAAGAAATATATATATATATATATATATATATATATATATATATATAGGGCAGTTTTCAAATATAGACAAATGAGTTAAACTATTTACAAATATAAAATTTTTTTACTGTTTATCCGCAATAGACCGCGATAGGCAGCGATAGAAGTCTATCGCTCAACCGATAAAATTCTATAGTAAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTGTTTATAGTAATTTTCCTATATATGTATATATGACATGAATTAAATTAGGTAAGATCATTTGACGATTAATGACAAAAATAAAGTAAAAACTTAATGAAGTATCAATTTAGTTGACTATTTTATTGAGTGTTAAAAATTGGAGAAAATATATATGTAATTGAATGATTAAAAAAAAAATTACCAAACAAAAACATGAAAAAAAAAAGAAAAAGAAAAAGAAAAAAGGTTTGACTTCTTTATGTTATCAAAAAATTGTTCTAGATACACCTTACAAAATAACTCAAACTCAGCAACCTAAACACATATTTCTTATCTCAACTCACCTCAATTCAACTCTTTAAACGAATTTTTAATTTCACAAATAATTTAATTTTACATATAGTTATTACCAACTCAATTCAACTCTACGCGCTAACACCGATGCTGAAATTCTCATAGTTTTTCATAAATTTGTAGTTTGTTGGCTTAAAAACTATATATTGTCGTGCGAACAACATTTTTACAAACTACAAATTCACACTATTTTGCAAACTCCAACACGTAACTAATAAAAAAGCCATAGTAAATCCACTAATTACTTTGCCAACTCTTCTTCACTCACCACTAGTATAACAATCATTGATTGTCAAAAATTATATATATACCAATTATTGAGATTAGTGGAAGATGAACTTTGATTAAGTTTGTATTTCGTTTCATGAATGTAAATAAATTTATGCATTCACTTGATTGTGGCAGGGCTATAAAAGCAGCAACTATGATTCTTGATCTTTCTCCTAAAGATAATGGAGCATCTCTTATCGTCGAGGATCCAGATGAATTATCTTCTGAATAATTTTATTTTACTTATTTTATAAATGTAATGACCGTACTTAGATTTATATGGCATAGGAGATATTACTATATCCATGTCGGTGACATTTGAAAGTAATGTAAAACAAGGTAATAAAATAAGGTAAATAACAAATAAATAACATTGATGGACAATTATG ATTTGTGCAACAGCTGCAAAATTAGCCTCCATATATTAATGGCCGCCGCAGCTCCTAATGAGTCGTCTCCACAAGCCACTGCGGCTTCTCGAAAGGTGTTGATCACTGGCGTTAGCAAAGGATTGGGAAGAGCTTTAGCCTTAGAGATGGCTAGCCGTGGCCACACCATCATCGGTTGCTCACGTGATCAAACTAAACTTCATTCTCTTCAAGTTAAGCTTTCCAAGTTATCAACAAATTACCATTTCCTCTTCAAAGTCGACGTGCGATCGGACAAGAATGTTGAAGAAGTAGCACAAAAGGTTGTGGAAAAGAAACTTGTTCCTGATATCATTGTGAATAATGCAGGTGTGGCTCATAGAAATGCAAAGCTATGGGAGCTTAATGCAGAAGATTTTAATAATGTGATTGATACTAATATAAAAGGAACATCAAATATTCTACGTCATTTCATTCCACTTATGATTCCTAACAAACAAGGAATTATCGTCAATATTTCATCACGTGCTGGAAGAGATGTTTGTGCTGACCTAGGAGCATATTGTGCATCGAAATGGGCAATTGAGGGATTAAGCAAATGTATTGCAAAAGGACTACCAGAGGAAATGACAATAGTGGCCTTAGATCCTGGTACTATTTACACAGACATGCTCATTTTATGCCTCCCTGATATTGGAACCACACCATTTCATTTTCAATCACCTCAAAAATGGGCTATAAAAGCAGCAACTATGATTCTTGATCTTTCTCCTAAAGATAATGGAGCATCTCTTATCGTCGAGGATCCAGATGAATTATCTTCTGAATAATTTTATTTTACTTATTTTATAAATGTAATGACCGTACTTAGATTTATATGGCATAGGAGATATTACTATATCCATGTCGGTGACATTTGAAAGTAATGTAAAACAAGGTAATAAAATAAGGTAAATAACAAATAAATAACATTGATGGACAATTATG ATGGCCGCCGCAGCTCCTAATGAGTCGTCTCCACAAGCCACTGCGGCTTCTCGAAAGGTGTTGATCACTGGCGTTAGCAAAGGATTGGGAAGAGCTTTAGCCTTAGAGATGGCTAGCCGTGGCCACACCATCATCGGTTGCTCACGTGATCAAACTAAACTTCATTCTCTTCAAGTTAAGCTTTCCAAGTTATCAACAAATTACCATTTCCTCTTCAAAGTCGACGTGCGATCGGACAAGAATGTTGAAGAAGTAGCACAAAAGGTTGTGGAAAAGAAACTTGTTCCTGATATCATTGTGAATAATGCAGGTGTGGCTCATAGAAATGCAAAGCTATGGGAGCTTAATGCAGAAGATTTTAATAATGTGATTGATACTAATATAAAAGGAACATCAAATATTCTACGTCATTTCATTCCACTTATGATTCCTAACAAACAAGGAATTATCGTCAATATTTCATCACGTGCTGGAAGAGATGTTTGTGCTGACCTAGGAGCATATTGTGCATCGAAATGGGCAATTGAGGGATTAAGCAAATGTATTGCAAAAGGACTACCAGAGGAAATGACAATAGTGGCCTTAGATCCTGGTACTATTTACACAGACATGCTCATTTTATGCCTCCCTGATATTGGAACCACACCATTTCATTTTCAATCACCTCAAAAATGGGCTATAAAAGCAGCAACTATGATTCTTGATCTTTCTCCTAAAGATAATGGAGCATCTCTTATCGTCGAGGATCCAGATGAATTATCTTCTGAATAA MAAAAPNESSPQATAASRKVLITGVSKGLGRALALEMASRGHTIIGCSRDQTKLHSLQVKLSKLSTNYHFLFKVDVRSDKNVEEVAQKVVEKKLVPDIIVNNAGVAHRNAKLWELNAEDFNNVIDTNIKGTSNILRHFIPLMIPNKQGIIVNISSRAGRDVCADLGAYCASKWAIEGLSKCIAKGLPEEMTIVALDPGTIYTDMLILCLPDIGTTPFHFQSPQKWAIKAATMILDLSPKDNGASLIVEDPDELSSE Homology
BLAST of Lsi11G000730 vs. ExPASy Swiss-Prot
Match: Q9SY73 (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1g10310 PE=1 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.7e-73 Identity = 145/247 (58.70%), Postives = 185/247 (74.90%), Query Frame = 0
BLAST of Lsi11G000730 vs. ExPASy Swiss-Prot
Match: P14802 (Uncharacterized oxidoreductase YoxD OS=Bacillus subtilis (strain 168) OX=224308 GN=yoxD PE=3 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 4.1e-19 Identity = 63/190 (33.16%), Postives = 102/190 (53.68%), Query Frame = 0
BLAST of Lsi11G000730 vs. ExPASy Swiss-Prot
Match: Q5HPW0 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=fabG PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 9.2e-19 Identity = 58/192 (30.21%), Postives = 108/192 (56.25%), Query Frame = 0
BLAST of Lsi11G000730 vs. ExPASy Swiss-Prot
Match: Q8CPI3 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=fabG PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 9.2e-19 Identity = 58/192 (30.21%), Postives = 108/192 (56.25%), Query Frame = 0
BLAST of Lsi11G000730 vs. ExPASy Swiss-Prot
Match: Q9X248 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=fabG PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 7.8e-18 Identity = 66/185 (35.68%), Postives = 100/185 (54.05%), Query Frame = 0
BLAST of Lsi11G000730 vs. ExPASy TrEMBL
Match: A0A6J1DPU9 (NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023210 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 8.8e-89 Identity = 171/246 (69.51%), Postives = 197/246 (80.08%), Query Frame = 0
BLAST of Lsi11G000730 vs. ExPASy TrEMBL
Match: A0A6J1EP06 (NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436387 PE=3 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 7.4e-88 Identity = 172/240 (71.67%), Postives = 201/240 (83.75%), Query Frame = 0
BLAST of Lsi11G000730 vs. ExPASy TrEMBL
Match: A0A6J1ETL0 (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436386 PE=3 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 7.4e-88 Identity = 171/247 (69.23%), Postives = 203/247 (82.19%), Query Frame = 0
BLAST of Lsi11G000730 vs. ExPASy TrEMBL
Match: A0A0A0KMF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G002570 PE=3 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 9.7e-88 Identity = 168/244 (68.85%), Postives = 199/244 (81.56%), Query Frame = 0
BLAST of Lsi11G000730 vs. ExPASy TrEMBL
Match: A0A6J1K2K5 (NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111490085 PE=3 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.7e-87 Identity = 171/247 (69.23%), Postives = 202/247 (81.78%), Query Frame = 0
BLAST of Lsi11G000730 vs. NCBI nr
Match: XP_038893204.1 (NADPH-dependent pterin aldehyde reductase-like isoform X1 [Benincasa hispida]) HSP 1 Score: 345.5 bits (885), Expect = 3.9e-91 Identity = 178/255 (69.80%), Postives = 207/255 (81.18%), Query Frame = 0
BLAST of Lsi11G000730 vs. NCBI nr
Match: XP_022156280.1 (NADPH-dependent pterin aldehyde reductase-like isoform X2 [Momordica charantia]) HSP 1 Score: 336.7 bits (862), Expect = 1.8e-88 Identity = 171/246 (69.51%), Postives = 197/246 (80.08%), Query Frame = 0
BLAST of Lsi11G000730 vs. NCBI nr
Match: XP_023530640.1 (NADPH-dependent pterin aldehyde reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 334.3 bits (856), Expect = 9.0e-88 Identity = 171/240 (71.25%), Postives = 200/240 (83.33%), Query Frame = 0
BLAST of Lsi11G000730 vs. NCBI nr
Match: XP_022929928.1 (NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 333.6 bits (854), Expect = 1.5e-87 Identity = 171/247 (69.23%), Postives = 203/247 (82.19%), Query Frame = 0
BLAST of Lsi11G000730 vs. NCBI nr
Match: XP_022929932.1 (NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 333.6 bits (854), Expect = 1.5e-87 Identity = 172/240 (71.67%), Postives = 201/240 (83.75%), Query Frame = 0
BLAST of Lsi11G000730 vs. TAIR 10
Match: AT1G10310.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 277.3 bits (708), Expect = 1.2e-74 Identity = 145/247 (58.70%), Postives = 185/247 (74.90%), Query Frame = 0
BLAST of Lsi11G000730 vs. TAIR 10
Match: AT5G10050.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 82.0 bits (201), Expect = 7.5e-16 Identity = 62/187 (33.16%), Postives = 102/187 (54.55%), Query Frame = 0
BLAST of Lsi11G000730 vs. TAIR 10
Match: AT5G65205.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 79.7 bits (195), Expect = 3.7e-15 Identity = 62/187 (33.16%), Postives = 102/187 (54.55%), Query Frame = 0
BLAST of Lsi11G000730 vs. TAIR 10
Match: AT3G55290.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13 Identity = 55/200 (27.50%), Postives = 106/200 (53.00%), Query Frame = 0
BLAST of Lsi11G000730 vs. TAIR 10
Match: AT3G55290.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13 Identity = 55/200 (27.50%), Postives = 106/200 (53.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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