Lsi10G012320 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTCCCAAGTAAGAAAAGCGGAAATACTCACAAGAAGACGAAAGACGCGTTTGGAGGAACCGGGATTGAAGGCGTTGAAGTTGCAGAATTTGCAAAGAGAAGAAGATGGTTTATCAGGAAGTGTTCTCTCACAGATAGAACAAACCCTGTAACAGAAACTAGTGTGATCCATAGCTATCACTGCGCACATGGTTGTTATTGGCTTAGCATTTTCCATTACTCTTCTGAAGGAGACTGCTTCCGTTCCTGAAAACTGAAAACACAGCGGCGCTCCGCCGCTATACACACAAACACTGTTTGGAGGGAAAAGAAGACCGAAATTTCGATATCGTTTTTTATTAGGGGTGTTTTTGTTAATTAAACATAGTACAAGGACACGGACGAAAATCTACCATCTTTCAAATCATCTGGGCCGGCCCAGTCTCCGGATGGGCTTGATGTCAAAAAACGGCCCACTAATTCTACAGTGATTTCATCCGCCGGGAACGGAGGCGATGAAAAACCCAACGAATACAGGAGTCCTGAAATGCACGGAACTGGAGTCTCACTCTTCAAACGAAGAATTAAGAAGCTCCATCAATTTGGTACGTTCATTCTCTTTTTGTGTTTGTCAATCAATTTTATATGCATTAATTTTTCATATTTTTCCTTTTTATTCCATATTAGAGTTGAGTGTTTGATCTTGTCTCTTCTCTTTGGGAAAGAAGGAATTAGTTTAAAGATAATTGTTGGTGCTGTTAATCTGGTTTCTAACGGAATGGAAAAAGGATTTAGACTATGTATGCATATGCAATAACTCATTAGAAGTAGTTCATCATTTTCGTTCAGGTGTTACCTACTCTTTATTTGTCTGATGAGCTAAGCTCCCTAGGTCTCTCTCAACTTCCCCAAATCAAAAGAAAATCTGAATTCTGCATTGCAGCAAATACGTTCTGATCAAAGGTTCAATTACCCTTTTGACTGTGAGGAAGTTGGAATTTGAGGTTCTTGCTATGGAGGCCGACCGGTAATGTAGTCTTAGATTTTTTTTTCTTACCACCTATGCTTGCTGATTCTTTAATATATTATTGAATTTGGTATTATCAGGTTAAATTCTCCCAGTACATTTACCATGACCATGGAAGTATTGGGTCATGAAATGCGATTCTATCAGGTATTGCTTGGAACAGTATTTGAAATTTTCATCGGTCAACATTCTTTCTGATTTGAAGATATAGTGCCAGTCTATCACATCCTTGCCATTTGAAGAACACATCTATGATAGCTCATTGTTATTAGCTAAACTTGCAAAGGGCTATTGTGCTAAAAGTACTCATCCACATTCAAATCCTCTATCCCTTGAGATTTGAGAGAGACATTTCTGTAGTTCATTGCTAACATTTCTGTAGTCCATTGCTAATTTCTATTCAACAGTCCTATCTGTAATAACCTATCTGACCATGGAAGTATGTTACATTGCCATAGGATCCCAATTCGAAACATTTAGGTACGACAGTGTGGGATGCATCACTGGTATTTGTCAAGTTTCTGGTAATCACTGCTCTACCTTTACATTCTCATTGATTCTTATTCGTCATTGGAGTTTCCTTTTTCCTTACAGTATTTGGATTAATATGTATCATCTTACTTACAAACGGAAAATTTAGTTGTTTGTGCGCAAGTTTTCAATTTTGTCAATCTCTGTTAGCAGCATATGACACGCCTAGTCAAATTGAACATATTTTGAATTTGATCATGCTTTCAATTTGTGAAAATGAAAGCATTGCATGGCATTTACTTTGATTATTGGTGGTGTTGGTCTAAAACCTGAGTTTGAGTTATCTTTAATCAAGATGCAAAAACTGAGAGCTGAAAGCTTTGCATCTATTAGATTTTTATAAAATCCCCGATTAATCTGTAAGCATTGAATGTGGAATGTCATTCAATATAACTAAGTTTATCAAAGATAGTTTACTGTAACCCTTCATGTCCATCCCTTATTGGATTAGATGTATTTTTTCATAGGTAGGATGATTTGTACCTTAATTAAATCTGGAAGATTATCATTCTTTTAAAACTTTTGATCTCTTTTTTCACTGTTTCAGGAGAAAAATTGCCGAAAAGGAAAATTTAGCCCTTCTAAACTTAAAGGAAAGCGTGTCATTGAGCTTGGAGCTGGTTGTGGGTTGGCTGGGTTTGGTGAGTTATTTATTTATTTATTATTATTATTTTAATGTAAAGTTTAATCTGAAACCAGTCCTTTTCGTTGCTAATACTTGTGCTTTAAGGGCTCTACCTTCCTTTTTCTCATGTAATTAACAATCTTGATTTGAACTGCTCTTTGTAGGCATGGCATTGCTTGGATGTGATGTAGTTGCTACAGACCAAAGGGAGGTATTGCCTATTCTAACGAGAAATATAGAACGTAATACACCAAGCTTAGCACAGATGAACCCTTCAGGTAGCCTTTCAAAATTATAAATTACAAACTTCCTTATAACAATCATTAGCATTTTAATTCTGGCAATTCAAGTAGAAAAGTTCAGTTTGTTTGAAGTTTGTTTTAGGATTTGAATTCCCCCACCGCCATGTGAAACTTTGTCAAGAGAAAATTATGGTTTTGATTTGGTTATACGGGAGTGATAGTGTTTGTAATTGATTACAGTATGAGAGAACCTTTGATTTTCTTTAGTGCTTCTAATTAGGGAAAGTTGTTCGTTGTAGAATCATTTGGTTCAATTAGGGCAGCAGAATTAGACTGGGGAAATGAAGATCATATCAAGGCAGTAGGTCCACCATGTGACTATATTATCGGCACTGACGTGGTAAGTTTATACGATTGTTTCTTGTTGAAGCACACAATGATACATTATTCAATAACAGATTTTTCTTATGTGATTTACAAAGCGAATAAGTGGATTTTTGTTATTCAACGCGAAGGTTTATGCAGAACATCTATTGGAACCACTTTTAAAGACAATACATGCATTATCAGGTCCCAAAACTACAATTATGGTATGAAATATAACTTTTATCCACATTTTCATATTGGAGATTCTTGTTGGCTTATTTATTCATACTTGTTATGTGAAGCTGGGGTATGAGATTCGTTCGACAAATGTTCACGAGCAAATGCTTGAGATGTGGAAAAAGAACTTTGAGGTGAAAACTGTATCACAATCAAAGGTACACTATACTTCCAACGTTTTTTGAGTCTCTGAAATGGCCATAAATTAAGATGTTAATCCTTGTTTAGTTTTGGGAGAACGTTGGCACAACAATGGTCAGGTTTGCAACATTGACAATAAAGAGGGAACCAGCAAGTCCTCAGCCAAGTACTTAAAACTGTGTTACATTTTTTTATGGTGCTATTTGTTGCAGATGGACTCACAGTATCAGCATCCCAGCATTCAGCTCTACATTATGGGGCTAAAGCCTGCACCTGGGAAAGCAGAGAACACTCGAGACAATGTTGAACAGGAAATTGACACGGTTTGTTCGAGGCAGGAGAATGATGAAAAGGAAGAAAGTTATGACGAAACGGGAATTGAGAAGGCAGAGGAGCCAGTTACAGAACATGAGGATAAGAAATTGGGTGACTGGGAAGCTAGAAGAATGGGCTCTATGGCCGCTCGGCTTCTGCAAGATGTAAAAATTGCTTGACCCTTTCTTTCCCAGATATCTTTTGCTGCATTCATACTTGAACAAATAGGTTAAATTCATATTAATGTTATACTTGCACTCGTGATGATGTTTGATTATGGAACGAACAGTTGATGGCGTTCCTTCAGTTTTAGGTGGAATGCCACAAATCTTGTTGCAAAAGCAGATGTATACATACTCTGTTCAGTTTGTAATGCTTAATAGCATCAACAACCCCTGCCATAGTAGCAGTTTTTATGTTGATTTCAATGAAATGAACACAAAGTTCCATAACATTTTGAAAA ATGAAATTCCCAAGTAAGAAAAGCGGAAATACTCACAAGAAGACGAAAGACGCGTTTGGAGGAACCGGGATTGAAGGCGTTGAAGTTGCAGAATTTGCAAAGAGAAGAAGATGGTTTATCAGGAAGTGTTCTCTCACAGATAGAACAAACCCTTACAAGGACACGGACGAAAATCTACCATCTTTCAAATCATCTGGGCCGGCCCAGTCTCCGGATGGGCTTGATGTCAAAAAACGGCCCACTAATTCTACAGTGATTTCATCCGCCGGGAACGGAGGCGATGAAAAACCCAACGAATACAGGAGTCCTGAAATGCACGGAACTGGAGTCTCACTCTTCAAACGAAGAATTAAGAAGCTCCATCAATTTGGTACCAAATACGTTCTGATCAAAGGTTCAATTACCCTTTTGACTGTGAGGAAGTTGGAATTTGAGGTTCTTGCTATGGAGGCCGACCGGTTAAATTCTCCCAGTACATTTACCATGACCATGGAAGTATTGGGTCATGAAATGCGATTCTATCAGGATCCCAATTCGAAACATTTAGGTACGACAGTGTGGGATGCATCACTGGTATTTGTCAAGTTTCTGGAGAAAAATTGCCGAAAAGGAAAATTTAGCCCTTCTAAACTTAAAGGAAAGCGTGTCATTGAGCTTGGAGCTGGTTGTGGGTTGGCTGGGTTTGGCATGGCATTGCTTGGATGTGATGTAGTTGCTACAGACCAAAGGGAGGTATTGCCTATTCTAACGAGAAATATAGAACGTAATACACCAAGCTTAGCACAGATGAACCCTTCAGAATCATTTGGTTCAATTAGGGCAGCAGAATTAGACTGGGGAAATGAAGATCATATCAAGGCAGTAGGTCCACCATGTGACTATATTATCGGCACTGACGTGCTGGGGTATGAGATTCGTTCGACAAATGTTCACGAGCAAATGCTTGAGATGTGGAAAAAGAACTTTGAGGTGAAAACTGTATCACAATCAAAGATGGACTCACAGTATCAGCATCCCAGCATTCAGCTCTACATTATGGGGCTAAAGCCTGCACCTGGGAAAGCAGAGAACACTCGAGACAATGTTGAACAGGAAATTGACACGGTTTGTTCGAGGCAGGAGAATGATGAAAAGGAAGAAAGTTATGACGAAACGGGAATTGAGAAGGCAGAGGAGCCAGTTACAGAACATGAGGATAAGAAATTGGGTGACTGGGAAGCTAGAAGAATGGGCTCTATGGCCGCTCGGCTTCTGCAAGATGTAAAAATTGCTTGACCCTTTCTTTCCCAGATATCTTTTGCTGCATTCATACTTGAACAAATAGGTTAAATTCATATTAATGTTATACTTGCACTCGTGATGATGTTTGATTATGGAACGAACAGTTGATGGCGTTCCTTCAGTTTTAGGTGGAATGCCACAAATCTTGTTGCAAAAGCAGATGTATACATACTCTGTTCAGTTTGTAATGCTTAATAGCATCAACAACCCCTGCCATAGTAGCAGTTTTTATGTTGATTTCAATGAAATGAACACAAAGTTCCATAACATTTTGAAAA ATGAAATTCCCAAGTAAGAAAAGCGGAAATACTCACAAGAAGACGAAAGACGCGTTTGGAGGAACCGGGATTGAAGGCGTTGAAGTTGCAGAATTTGCAAAGAGAAGAAGATGGTTTATCAGGAAGTGTTCTCTCACAGATAGAACAAACCCTTACAAGGACACGGACGAAAATCTACCATCTTTCAAATCATCTGGGCCGGCCCAGTCTCCGGATGGGCTTGATGTCAAAAAACGGCCCACTAATTCTACAGTGATTTCATCCGCCGGGAACGGAGGCGATGAAAAACCCAACGAATACAGGAGTCCTGAAATGCACGGAACTGGAGTCTCACTCTTCAAACGAAGAATTAAGAAGCTCCATCAATTTGGTACCAAATACGTTCTGATCAAAGGTTCAATTACCCTTTTGACTGTGAGGAAGTTGGAATTTGAGGTTCTTGCTATGGAGGCCGACCGGTTAAATTCTCCCAGTACATTTACCATGACCATGGAAGTATTGGGTCATGAAATGCGATTCTATCAGGATCCCAATTCGAAACATTTAGGTACGACAGTGTGGGATGCATCACTGGTATTTGTCAAGTTTCTGGAGAAAAATTGCCGAAAAGGAAAATTTAGCCCTTCTAAACTTAAAGGAAAGCGTGTCATTGAGCTTGGAGCTGGTTGTGGGTTGGCTGGGTTTGGCATGGCATTGCTTGGATGTGATGTAGTTGCTACAGACCAAAGGGAGGTATTGCCTATTCTAACGAGAAATATAGAACGTAATACACCAAGCTTAGCACAGATGAACCCTTCAGAATCATTTGGTTCAATTAGGGCAGCAGAATTAGACTGGGGAAATGAAGATCATATCAAGGCAGTAGGTCCACCATGTGACTATATTATCGGCACTGACGTGCTGGGGTATGAGATTCGTTCGACAAATGTTCACGAGCAAATGCTTGAGATGTGGAAAAAGAACTTTGAGGTGAAAACTGTATCACAATCAAAGATGGACTCACAGTATCAGCATCCCAGCATTCAGCTCTACATTATGGGGCTAAAGCCTGCACCTGGGAAAGCAGAGAACACTCGAGACAATGTTGAACAGGAAATTGACACGGTTTGTTCGAGGCAGGAGAATGATGAAAAGGAAGAAAGTTATGACGAAACGGGAATTGAGAAGGCAGAGGAGCCAGTTACAGAACATGAGGATAAGAAATTGGGTGACTGGGAAGCTAGAAGAATGGGCTCTATGGCCGCTCGGCTTCTGCAAGATGTAAAAATTGCTTGA MKFPSKKSGNTHKKTKDAFGGTGIEGVEVAEFAKRRRWFIRKCSLTDRTNPYKDTDENLPSFKSSGPAQSPDGLDVKKRPTNSTVISSAGNGGDEKPNEYRSPEMHGTGVSLFKRRIKKLHQFGTKYVLIKGSITLLTVRKLEFEVLAMEADRLNSPSTFTMTMEVLGHEMRFYQDPNSKHLGTTVWDASLVFVKFLEKNCRKGKFSPSKLKGKRVIELGAGCGLAGFGMALLGCDVVATDQREVLPILTRNIERNTPSLAQMNPSESFGSIRAAELDWGNEDHIKAVGPPCDYIIGTDVLGYEIRSTNVHEQMLEMWKKNFEVKTVSQSKMDSQYQHPSIQLYIMGLKPAPGKAENTRDNVEQEIDTVCSRQENDEKEESYDETGIEKAEEPVTEHEDKKLGDWEARRMGSMAARLLQDVKIA Homology
BLAST of Lsi10G012320 vs. ExPASy Swiss-Prot
Match: Q5BLD8 (Protein N-lysine methyltransferase METTL21A OS=Danio rerio OX=7955 GN=mettl21a PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 7.8e-15 Identity = 56/149 (37.58%), Postives = 73/149 (48.99%), Query Frame = 0
BLAST of Lsi10G012320 vs. ExPASy Swiss-Prot
Match: Q9CQL0 (Protein N-lysine methyltransferase METTL21A OS=Mus musculus OX=10090 GN=Mettl21A PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.2e-10 Identity = 48/160 (30.00%), Postives = 71/160 (44.38%), Query Frame = 0
BLAST of Lsi10G012320 vs. ExPASy Swiss-Prot
Match: Q8WXB1 (Protein N-lysine methyltransferase METTL21A OS=Homo sapiens OX=9606 GN=METTL21A PE=1 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 2.0e-10 Identity = 45/149 (30.20%), Postives = 67/149 (44.97%), Query Frame = 0
BLAST of Lsi10G012320 vs. ExPASy Swiss-Prot
Match: A4FV42 (Protein N-lysine methyltransferase METTL21A OS=Bos taurus OX=9913 GN=METTL21A PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 9.9e-10 Identity = 51/192 (26.56%), Postives = 78/192 (40.62%), Query Frame = 0
BLAST of Lsi10G012320 vs. ExPASy Swiss-Prot
Match: A4IGU3 (Protein N-lysine methyltransferase METTL21A OS=Xenopus tropicalis OX=8364 GN=mettl21a PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.8e-09 Identity = 42/142 (29.58%), Postives = 61/142 (42.96%), Query Frame = 0
BLAST of Lsi10G012320 vs. ExPASy TrEMBL
Match: A0A1S4E579 (protein N-lysine methyltransferase METTL21A OS=Cucumis melo OX=3656 GN=LOC103502991 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 6.4e-137 Identity = 254/308 (82.47%), Postives = 266/308 (86.36%), Query Frame = 0
BLAST of Lsi10G012320 vs. ExPASy TrEMBL
Match: A0A0A0KGI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147640 PE=4 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 8.4e-137 Identity = 254/308 (82.47%), Postives = 266/308 (86.36%), Query Frame = 0
BLAST of Lsi10G012320 vs. ExPASy TrEMBL
Match: A0A6J1FT98 (protein-lysine methyltransferase METTL21D OS=Cucurbita moschata OX=3662 GN=LOC111448568 PE=4 SV=1) HSP 1 Score: 488.0 bits (1255), Expect = 3.9e-134 Identity = 246/300 (82.00%), Postives = 262/300 (87.33%), Query Frame = 0
BLAST of Lsi10G012320 vs. ExPASy TrEMBL
Match: A0A6J1CGP5 (protein N-lysine methyltransferase METTL21A OS=Momordica charantia OX=3673 GN=LOC111011074 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 5.8e-130 Identity = 241/302 (79.80%), Postives = 260/302 (86.09%), Query Frame = 0
BLAST of Lsi10G012320 vs. ExPASy TrEMBL
Match: A0A6J1JBP5 (protein N-lysine methyltransferase METTL21A OS=Cucurbita maxima OX=3661 GN=LOC111483605 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 9.3e-128 Identity = 239/300 (79.67%), Postives = 256/300 (85.33%), Query Frame = 0
BLAST of Lsi10G012320 vs. NCBI nr
Match: XP_008465352.1 (PREDICTED: protein N-lysine methyltransferase METTL21A [Cucumis melo] >XP_016903376.1 PREDICTED: protein N-lysine methyltransferase METTL21A [Cucumis melo] >XP_016903377.1 PREDICTED: protein N-lysine methyltransferase METTL21A [Cucumis melo]) HSP 1 Score: 497.3 bits (1279), Expect = 1.3e-136 Identity = 254/308 (82.47%), Postives = 266/308 (86.36%), Query Frame = 0
BLAST of Lsi10G012320 vs. NCBI nr
Match: KAG6570813.1 (Protein-lysine methyltransferase METTL21D, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 497.3 bits (1279), Expect = 1.3e-136 Identity = 267/380 (70.26%), Postives = 288/380 (75.79%), Query Frame = 0
BLAST of Lsi10G012320 vs. NCBI nr
Match: XP_004145760.1 (protein N-lysine methyltransferase METTL21A [Cucumis sativus] >XP_031742643.1 protein N-lysine methyltransferase METTL21A [Cucumis sativus] >KGN46871.1 hypothetical protein Csa_020619 [Cucumis sativus]) HSP 1 Score: 496.9 bits (1278), Expect = 1.7e-136 Identity = 254/308 (82.47%), Postives = 266/308 (86.36%), Query Frame = 0
BLAST of Lsi10G012320 vs. NCBI nr
Match: XP_038901723.1 (protein N-lysine methyltransferase METTL21A [Benincasa hispida] >XP_038901724.1 protein N-lysine methyltransferase METTL21A [Benincasa hispida] >XP_038901725.1 protein N-lysine methyltransferase METTL21A [Benincasa hispida]) HSP 1 Score: 491.1 bits (1263), Expect = 9.5e-135 Identity = 250/301 (83.06%), Postives = 262/301 (87.04%), Query Frame = 0
BLAST of Lsi10G012320 vs. NCBI nr
Match: XP_022944009.1 (protein-lysine methyltransferase METTL21D [Cucurbita moschata] >XP_022944011.1 protein-lysine methyltransferase METTL21D [Cucurbita moschata]) HSP 1 Score: 488.0 bits (1255), Expect = 8.1e-134 Identity = 246/300 (82.00%), Postives = 262/300 (87.33%), Query Frame = 0
BLAST of Lsi10G012320 vs. TAIR 10
Match: AT1G08125.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 325.1 bits (832), Expect = 8.4e-89 Identity = 177/309 (57.28%), Postives = 212/309 (68.61%), Query Frame = 0
BLAST of Lsi10G012320 vs. TAIR 10
Match: AT1G08125.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 320.1 bits (819), Expect = 2.7e-87 Identity = 175/305 (57.38%), Postives = 209/305 (68.52%), Query Frame = 0
BLAST of Lsi10G012320 vs. TAIR 10
Match: AT1G08125.3 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 225.3 bits (573), Expect = 9.1e-59 Identity = 141/280 (50.36%), Postives = 172/280 (61.43%), Query Frame = 0
BLAST of Lsi10G012320 vs. TAIR 10
Match: AT5G44170.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 100.9 bits (250), Expect = 2.6e-21 Identity = 68/230 (29.57%), Postives = 104/230 (45.22%), Query Frame = 0
BLAST of Lsi10G012320 vs. TAIR 10
Match: AT1G73320.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 96.3 bits (238), Expect = 6.4e-20 Identity = 66/225 (29.33%), Postives = 107/225 (47.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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