Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATACTTTGGTAATTCTCTCCTTCCCCACCATGTTCTTAGTTAGGCTTGAGCAATTTGAACCTCTTATTGATTCAACCTCCTTGTTGGCTCAAATTTCCAACGATGCCGACGTGAAATTCACACCATTGATGCTCATGATAATCGTCTCGAACCATTCCCCTCACTTCGTCGCAACGCTGCAATTATCCCGACGATTGTTCATCAACTTCTCCGTCGATCATAATAAAAGTTCCAAAGTTTCCCTTGAACCCTTCCATGAGGCTATGTTGGATGGTGGAAGCTTTTCTTCAATGACAATCCATCTTTTGGATAAAACAAACCAAATGGTCCTTAGATTTGAGACTTCAAGTTAGTATATCTATATATATAATTCCTTTCTACTCTGGTATGATGAAGGTGCTAAAGAAGTCTCAACCTAGTTGAGATGTGTCGGTGCACCTCTTGATGCTTCTAATTATATGATGCTAGAACATTTTAGATTATTACTTTTTATGTATTGTTACAAGAATTTCGGTTTCTTCCGATGAAATCTTTTCCGAGGCTTTCAACCATCTCTAAAATTCTTGTAGTGATCTTGACTGTTTTCTGATTTTTATTTGATTTCCCTTTATATAAATTTTAGGCCATGATATTCCACCGTTGCATCATGAATTGACATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAATTTTTTCACAGTTACTTCTAAAGAGTTAAGAAGGATTATAAAAGAATTACCTATCTTCCATCAAGATTCAGGTATTTATTATTATTGACACTCTCCTTTTTCTTTTTTTATTTCATAATTATTTGAAAGAAAATGGTTTATGTTTCTAACATAACTTGTCTACGTGTTACAGTTTGTGTTACGGTAACGGGTTCTCGAGTCAAGTTCTCTATTCAATCTAAGGAGATTGTTCTTACGAAAGAG
mRNA sequence
TATACTTTGGTAATTCTCTCCTTCCCCACCATGTTCTTAGTTAGGCTTGAGCAATTTGAACCTCTTATTGATTCAACCTCCTTGTTGGCTCAAATTTCCAACGATGCCGACGTGAAATTCACACCATTGATGCTCATGATAATCGTCTCGAACCATTCCCCTCACTTCGTCGCAACGCTGCAATTATCCCGACGATTGTTCATCAACTTCTCCGTCGATCATAATAAAAGTTCCAAAGTTTCCCTTGAACCCTTCCATGAGGCTATGTTGGATGGCCATGATATTCCACCGTTGCATCATGAATTGACATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAATTTTTTCACAGTTACTTCTAAAGAGTTAAGAAGGATTATAAAAGAATTACCTATCTTCCATCAAGATTCAGTTTGTGTTACGGTAACGGGTTCTCGAGTCAAGTTCTCTATTCAATCTAAGGAGATTGTTCTTACGAAAGAG
Coding sequence (CDS)
TATACTTTGGTAATTCTCTCCTTCCCCACCATGTTCTTAGTTAGGCTTGAGCAATTTGAACCTCTTATTGATTCAACCTCCTTGTTGGCTCAAATTTCCAACGATGCCGACGTGAAATTCACACCATTGATGCTCATGATAATCGTCTCGAACCATTCCCCTCACTTCGTCGCAACGCTGCAATTATCCCGACGATTGTTCATCAACTTCTCCGTCGATCATAATAAAAGTTCCAAAGTTTCCCTTGAACCCTTCCATGAGGCTATGTTGGATGGCCATGATATTCCACCGTTGCATCATGAATTGACATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAATTTTTTCACAGTTACTTCTAAAGAGTTAAGAAGGATTATAAAAGAATTACCTATCTTCCATCAAGATTCAGTTTGTGTTACGGTAACGGGTTCTCGAGTCAAGTTCTCTATTCAATCTAAGGAGATTGTTCTTACGAAAGAG
Protein sequence
YTLVILSFPTMFLVRLEQFEPLIDSTSLLAQISNDADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFINFSVDHNKSSKVSLEPFHEAMLDGHDIPPLHHELTLSPPQAENLGQVEYGNFFTVTSKELRRIIKELPIFHQDSVCVTVTGSRVKFSIQSKEIVLTKE
Homology
BLAST of Lsi09G015390.1 vs. ExPASy TrEMBL
Match:
A0A5D3BTK3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00820 PE=4 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 9.1e-71
Identity = 139/158 (87.97%), Postives = 150/158 (94.94%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISNDADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFINF 70
MFLVRLEQFEPLID+TSLLAQ++ DADVKFTPLMLMIIVSN SP FVATLQLSRRLF NF
Sbjct: 1 MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60
Query: 71 SVDHNKSSKVSLEPFHEAMLDG--HDIPPLHHELTLSPPQAENLGQVEYGNFFTVTSKEL 130
SVDHNKSSKVSL+PFH+AMLDG HD+PPLHHEL LSPPQAENLGQVEYGNFFTVTS+EL
Sbjct: 61 SVDHNKSSKVSLQPFHDAMLDGGSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSREL 120
Query: 131 RRIIKELPIFHQDSVCVTVTGSRVKFSIQSKEIVLTKE 167
RRIIKELP+FHQD+V VTVTGS+VKFSIQSKEI+LTKE
Sbjct: 121 RRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE 158
BLAST of Lsi09G015390.1 vs. ExPASy TrEMBL
Match:
A0A1S3C8J1 (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 4.2e-68
Identity = 139/181 (76.80%), Postives = 150/181 (82.87%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISNDADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFINF 70
MFLVRLEQFEPLID+TSLLAQ++ DADVKFTPLMLMIIVSN SP FVATLQLSRRLF NF
Sbjct: 1 MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60
Query: 71 SVDHNKSSKVSLEPFHEAMLDG-------------------------HDIPPLHHELTLS 130
SVDHNKSSKVSL+PFH+AMLDG HD+PPLHHEL LS
Sbjct: 61 SVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELALS 120
Query: 131 PPQAENLGQVEYGNFFTVTSKELRRIIKELPIFHQDSVCVTVTGSRVKFSIQSKEIVLTK 167
PPQAENLGQVEYGNFFTVTS+ELRRIIKELP+FHQD+V VTVTGS+VKFSIQSKEI+LTK
Sbjct: 121 PPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTK 180
BLAST of Lsi09G015390.1 vs. ExPASy TrEMBL
Match:
A0A1S4E4N8 (uncharacterized protein LOC103502263 OS=Cucumis melo OX=3656 GN=LOC103502263 PE=4 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 3.0e-45
Identity = 97/180 (53.89%), Postives = 126/180 (70.00%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISNDADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFINF 70
MFLVRL+ F+PL D+TS LAQI+ +AD+KFTPL II SN SP FVA LQ++ FIN+
Sbjct: 3 MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINY 62
Query: 71 SVDHNKSSKVSLEPFHEAMLDG------------------------HDIPPLHHELTLSP 130
VD++ +S++SLE FH+A+LDG P +HHEL+L+P
Sbjct: 63 KVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLILRFESSSHAPKVHHELSLTP 122
Query: 131 PQAENLGQVEYGNFFTVTSKELRRIIKELPIFHQDSVCVTVTGSRVKFSIQSKEIVLTKE 167
Q E+LG+V+Y FF++ SK+LRR+I+ LPIFH DS+CVT TGS+VKFSI SKEIVLTKE
Sbjct: 123 SQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKE 182
BLAST of Lsi09G015390.1 vs. ExPASy TrEMBL
Match:
A0A5D3BV00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00830 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 7.5e-41
Identity = 104/187 (55.61%), Postives = 124/187 (66.31%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISND-ADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFIN 70
MFLV+L +FEPL+DSTS LAQ SND AD+KF P L +IV N SP F ATLQLS R F N
Sbjct: 1 MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSN 60
Query: 71 FSVDHNKSSKVSLEPFHEAMLDGHD-------------------------IPPLHHELTL 130
+SVDH SSKVSLE FH+AMLDG D I P HHELTL
Sbjct: 61 YSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQMFLRFDTPSSQIQPSHHELTL 120
Query: 131 SPPQAENL----GQVEYGNFFTVTSKELRRIIKELPIFHQDS-VCVTVTGSRVKFSIQSK 167
SPPQ+E++ +++ F V SK LRR+IKELPIFH DS +CV+VT S++KFSI SK
Sbjct: 121 SPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASK 180
BLAST of Lsi09G015390.1 vs. ExPASy TrEMBL
Match:
A0A5D3DZ07 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1810G00070 PE=4 SV=1)
HSP 1 Score: 168.3 bits (425), Expect = 2.7e-38
Identity = 103/186 (55.38%), Postives = 124/186 (66.67%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISND-ADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFIN 70
MFLV+L+ F+PL+D+TS LAQIS D AD+KFTP II S+ SP F+ATLQLS + F
Sbjct: 1 MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60
Query: 71 FSVDHNKSSKVSLEPFHEAMLDG-------------------------HDIPPLHHELTL 130
FSVD++ SSKVSLE FH+A+LDG +I PLHHELTL
Sbjct: 61 FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSEIQPLHHELTL 120
Query: 131 SPPQAEN--LGQVEYG--NFFTVTSKELRRIIKELPIFHQDS-VCVTVTGSRVKFSIQSK 166
SPPQAE+ +GQ E +F V SK LRRIIK+LPIF DS + V VT SRVKFSI SK
Sbjct: 121 SPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASK 180
BLAST of Lsi09G015390.1 vs. NCBI nr
Match:
TYK02993.1 (uncharacterized protein E5676_scaffold46G00820 [Cucumis melo var. makuwa])
HSP 1 Score: 276.2 bits (705), Expect = 1.9e-70
Identity = 139/158 (87.97%), Postives = 150/158 (94.94%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISNDADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFINF 70
MFLVRLEQFEPLID+TSLLAQ++ DADVKFTPLMLMIIVSN SP FVATLQLSRRLF NF
Sbjct: 1 MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60
Query: 71 SVDHNKSSKVSLEPFHEAMLDG--HDIPPLHHELTLSPPQAENLGQVEYGNFFTVTSKEL 130
SVDHNKSSKVSL+PFH+AMLDG HD+PPLHHEL LSPPQAENLGQVEYGNFFTVTS+EL
Sbjct: 61 SVDHNKSSKVSLQPFHDAMLDGGSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSREL 120
Query: 131 RRIIKELPIFHQDSVCVTVTGSRVKFSIQSKEIVLTKE 167
RRIIKELP+FHQD+V VTVTGS+VKFSIQSKEI+LTKE
Sbjct: 121 RRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE 158
BLAST of Lsi09G015390.1 vs. NCBI nr
Match:
XP_008458682.1 (PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo])
HSP 1 Score: 267.3 bits (682), Expect = 8.8e-68
Identity = 139/181 (76.80%), Postives = 150/181 (82.87%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISNDADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFINF 70
MFLVRLEQFEPLID+TSLLAQ++ DADVKFTPLMLMIIVSN SP FVATLQLSRRLF NF
Sbjct: 1 MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60
Query: 71 SVDHNKSSKVSLEPFHEAMLDG-------------------------HDIPPLHHELTLS 130
SVDHNKSSKVSL+PFH+AMLDG HD+PPLHHEL LS
Sbjct: 61 SVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELALS 120
Query: 131 PPQAENLGQVEYGNFFTVTSKELRRIIKELPIFHQDSVCVTVTGSRVKFSIQSKEIVLTK 167
PPQAENLGQVEYGNFFTVTS+ELRRIIKELP+FHQD+V VTVTGS+VKFSIQSKEI+LTK
Sbjct: 121 PPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTK 180
BLAST of Lsi09G015390.1 vs. NCBI nr
Match:
KAG7013723.1 (hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48
Identity = 112/181 (61.88%), Postives = 127/181 (70.17%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISNDADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFINF 70
MFLV+L+QFEPL+D+TSLL QIS DADV+FT ML +I S+ SP FVATLQ+S RLF N+
Sbjct: 1 MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNY 60
Query: 71 SVDHNKSSKVSLEPFHEAMLDGHDI-------------------------PPLHHELTLS 130
SVDH SSKVSLE FH+AMLDG PPLH EL LS
Sbjct: 61 SVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPLS 120
Query: 131 PPQAENLGQVEYGNFFTVTSKELRRIIKELPIFHQDSVCVTVTGSRVKFSIQSKEIVLTK 167
PPQAE+LGQVEYG FFTV SK LR+IIKELP+FH D V V T +RVKFSI SKEI +TK
Sbjct: 121 PPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTK 180
BLAST of Lsi09G015390.1 vs. NCBI nr
Match:
XP_016903187.1 (PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo])
HSP 1 Score: 191.4 bits (485), Expect = 6.1e-45
Identity = 97/180 (53.89%), Postives = 126/180 (70.00%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISNDADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFINF 70
MFLVRL+ F+PL D+TS LAQI+ +AD+KFTPL II SN SP FVA LQ++ FIN+
Sbjct: 3 MFLVRLKDFDPLFDATSRLAQIAREADIKFTPLFFSIIASNRSPRFVAYLQMTHHCFINY 62
Query: 71 SVDHNKSSKVSLEPFHEAMLDG------------------------HDIPPLHHELTLSP 130
VD++ +S++SLE FH+A+LDG P +HHEL+L+P
Sbjct: 63 KVDNDHTSRISLESFHDALLDGGASPSMTIHLLANIKQLILRFESSSHAPKVHHELSLTP 122
Query: 131 PQAENLGQVEYGNFFTVTSKELRRIIKELPIFHQDSVCVTVTGSRVKFSIQSKEIVLTKE 167
Q E+LG+V+Y FF++ SK+LRR+I+ LPIFH DS+CVT TGS+VKFSI SKEIVLTKE
Sbjct: 123 SQEEDLGEVDYAKFFSIDSKDLRRVIRNLPIFHGDSICVTATGSQVKFSIASKEIVLTKE 182
BLAST of Lsi09G015390.1 vs. NCBI nr
Match:
XP_038875055.1 (uncharacterized protein LOC120067580 [Benincasa hispida])
HSP 1 Score: 179.9 bits (455), Expect = 1.8e-41
Identity = 106/182 (58.24%), Postives = 122/182 (67.03%), Query Frame = 0
Query: 11 MFLVRLEQFEPLIDSTSLLAQISNDADVKFTPLMLMIIVSNHSPHFVATLQLSRRLFINF 70
MFLV+L FEPL+D+TS LAQISN ADVKFTPL +I SP FVATLQLS++ F N+
Sbjct: 1 MFLVKLTNFEPLLDATSYLAQISNYADVKFTPLEFYLIAPYPSPRFVATLQLSQKCFTNY 60
Query: 71 SVDHNKSSKVSLEPFHEAMLDG-------------------------HDIPPLHHELTLS 130
SVDH +SKV LE FH+A+LDG +IPPLHHELT S
Sbjct: 61 SVDHEHTSKVDLESFHDAILDGGSFASMTIHLLEKPNQMILRFQTPSSEIPPLHHELTFS 120
Query: 131 PPQ-AENL--GQVEYGNFFTVTSKELRRIIKELPIFHQDS-VCVTVTGSRVKFSIQSKEI 164
PPQ A+N GQ+E G FF V S+ LRRIIKELPIF DS VCV VT S++KFSI SKEI
Sbjct: 121 PPQLADNNIGGQLEEGKFFIVKSEALRRIIKELPIFQDDSVVCVGVTSSQIKFSIASKEI 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BTK3 | 9.1e-71 | 87.97 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3C8J1 | 4.2e-68 | 76.80 | uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=... | [more] |
A0A1S4E4N8 | 3.0e-45 | 53.89 | uncharacterized protein LOC103502263 OS=Cucumis melo OX=3656 GN=LOC103502263 PE=... | [more] |
A0A5D3BV00 | 7.5e-41 | 55.61 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3DZ07 | 2.7e-38 | 55.38 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
TYK02993.1 | 1.9e-70 | 87.97 | uncharacterized protein E5676_scaffold46G00820 [Cucumis melo var. makuwa] | [more] |
XP_008458682.1 | 8.8e-68 | 76.80 | PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo] | [more] |
KAG7013723.1 | 1.6e-48 | 61.88 | hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_016903187.1 | 6.1e-45 | 53.89 | PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo] | [more] |
XP_038875055.1 | 1.8e-41 | 58.24 | uncharacterized protein LOC120067580 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |