Sed0009019 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGGGCAAGAACAAAAAATGAGCTGTACTTTACCCTCCACCCATTGATAAGTACTCACAGGCAGCAACAAAATCACCAAAAAGAAAGAAAAAAGAAAAGAAAAAAAAGAACCCAATTGAAATGGGTTCAATTCCCAAAGTGATAAGTTATGTTTCAAATGTCTTGGAGAGAATTTCAGAGTCCAATGATGATGGTGATGATGAGGGGAAATTAGTGTCAAGGTTTGATGGATTGACAAAGCCAAGCATTTCAATTAAGAGCTACTTGGAGAGGATTTTCAAGTATGCAAATTGCAGCCCAAGCTGCTTTGCTGTGGCCTATGTTTATCTTCATCGCTTTGTTCAGCGCCACCAGCCTTCTCATTTTCTCATTCATTCTTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTTTCTGCCAAGTTCTTGGATGACTTGTAAGTTCTTTTTTTTTTTTATCAATCTTTGATTTTACTTTTTTTTTTTTGCCTACATTTAGGCTCCATTTGATCATTATTTGTTTTTTTGATTTTTGATTTTTTAAATTTAAATTTATTTTTACTTAAAATTTTTAATTAAATTTTAAAAACAAAAACACCCTTGTGTAAGTTTTTTTTGAAATTTTTTTGTTTAATTTCTAAGATGTAAATATCTATCAAACAAAAAACATATGATAAGGTTGTTATTGTAGATTTAAATTTTAAAAATAAAAGATTAAAAATAAAATTGCTATTAAATGAGTCTTCATTTTTTGTTTTTGTTCTTTTTTATAATTTTTTTGGCTTTGAAATTAAGTTAACTTTAAAGTTTAGTAGTGCTTTGAGTACATTTTCTTTGTTTGATGGTGATTTGGGTTCTTCATTTTGCAAATTTGTATAATGTGAGTCTAACATCAACATTTTTTTTATTCACTAATTTTAGATCAAATCTTAATTTTATTTTTATCGGATTAAATATTGTTTATAAAAGTTGTAAGATCTCATATTTCTAATGTTAGATCTTCAACATTTCTTCATCTTGGGTTCGAATTTTGAAGTTTTTTTTTTTATTGTTTTTTAGTACATCAACTATTTTTAGTGGTTGAAGAATTTGAATCTAAGATCTTTTAGTCGATGATACATGTCAATTACCATTGAATTCAATATACTTTCACTATTTTGTTAAAGTTATGATAGAAGATATTGAGGGATAATTATGTAAAATATAGAATTTTAATATGGGAATGTTTGGAGAAAAAAGTGTTAACATGGAATTTTGAATATATGATGATCGAGGGGTAATTAGGAAAAGTTGTTGGATCTGTTTGCAATTTGAACATAAATCAAATTTTGTGTATTTATTTTTTCTCTTATTTTTGCAGGTATTACAACAATGCCTACTATGCCAAAGTTGGTGGAATAAGCACCATGGAGATGAACCTTCTTGAAGTGGATTTCTTATTCGGTTTGGGATTCCAACTAAACGTGTCACCAAACACTTTTCACATTTACTGCTCCTATCTCCAAACAGAGATGCTATTAGCACAACCCAATCCTCAAATCAAAATACCCAATATAAAACTTCATTCTCTTACTGAAGATGAAACATCTCATCCAAAACAATTGGCAGTTTAAATCAAAACAAATCATTAGAAGGGTGAGTCGTCAAACTATCTTACACGTATTTCGACCTATTCTTATGGTAGAACTACCTGATCCCTATTCCATTTAGTTATAAAGAAACAAGTAGACAAATAATATTTAAATGAATGATTATCATATATTAAACTCATTGTTTCCTAAAAAATGTTTGAGACAAAAAAAAAATGAAAATGATTTCGAAGAAGAGACAAAGAGAATGTGAATGATTATGAGGAATAATTACATTGTCCCGATTTGAATTTCCTCCATAATCAATATTCACTTCCTCATAATTATTATTCATTATCTTCATAATCTCATGCTCTCCCACAAGTAATAGCTCTCTCACAATGGCTCAAACGTTTCTTTAGTGTGTTAATATCTTTTTGACCATTAGGTGAATCCATGATGGTTCTAAAACGACGACATTTTTTTTTTGGTGAAGCAAGATCTATTTGGATGGGCTGTGAGCCTTTTTAGGGTTAAATGTGGGCTTTTTCTCTCAAGCCTTTTGGGCCCTAATTTGACTCCCTTGTAGTTGTTGGACATTTTTGCCCTCCATATCTATATTGTGTAGAATTGTATTATGGTGATTTGTGAGTATTAACTATTTTTGTGAGTGATTTGTAAGTACAAACATTGTATTTCTATATTCAGTCTGTTAGTGAGAGTTTAAATATGGTGTTTTTCTTTCTCAATTTCTAAGAATTAATTTGTGTCAAATTTATATCTTATTTACCTAGTAGAATGTATATATTGATGAACA AAAAGGGCAAGAACAAAAAATGAGCTGTACTTTACCCTCCACCCATTGATAAGTACTCACAGGCAGCAACAAAATCACCAAAAAGAAAGAAAAAAGAAAAGAAAAAAAAGAACCCAATTGAAATGGGTTCAATTCCCAAAGTGATAAGTTATGTTTCAAATGTCTTGGAGAGAATTTCAGAGTCCAATGATGATGGTGATGATGAGGGGAAATTAGTGTCAAGGTTTGATGGATTGACAAAGCCAAGCATTTCAATTAAGAGCTACTTGGAGAGGATTTTCAAGTATGCAAATTGCAGCCCAAGCTGCTTTGCTGTGGCCTATGTTTATCTTCATCGCTTTGTTCAGCGCCACCAGCCTTCTCATTTTCTCATTCATTCTTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTTTCTGCCAAGTTCTTGGATGACTTGTATTACAACAATGCCTACTATGCCAAAGTTGGTGGAATAAGCACCATGGAGATGAACCTTCTTGAAGTGGATTTCTTATTCGGTTTGGGATTCCAACTAAACGTGTCACCAAACACTTTTCACATTTACTGCTCCTATCTCCAAACAGAGATGCTATTAGCACAACCCAATCCTCAAATCAAAATACCCAATATAAAACTTCATTCTCTTACTGAAGATGAAACATCTCATCCAAAACAATTGGCAGTTTAAATCAAAACAAATCATTAGAAGGGTGAATCCATGATGGTTCTAAAACGACGACATTTTTTTTTTGGTGAAGCAAGATCTATTTGGATGGGCTGTGAGCCTTTTTAGGGTTAAATGTGGGCTTTTTCTCTCAAGCCTTTTGGGCCCTAATTTGACTCCCTTGTAGTTGTTGGACATTTTTGCCCTCCATATCTATATTGTGTAGAATTGTATTATGGTGATTTGTGAGTATTAACTATTTTTGTGAGTGATTTGTAAGTACAAACATTGTATTTCTATATTCAGTCTGTTAGTGAGAGTTTAAATATGGTGTTTTTCTTTCTCAATTTCTAAGAATTAATTTGTGTCAAATTTATATCTTATTTACCTAGTAGAATGTATATATTGATGAACA ATGGGTTCAATTCCCAAAGTGATAAGTTATGTTTCAAATGTCTTGGAGAGAATTTCAGAGTCCAATGATGATGGTGATGATGAGGGGAAATTAGTGTCAAGGTTTGATGGATTGACAAAGCCAAGCATTTCAATTAAGAGCTACTTGGAGAGGATTTTCAAGTATGCAAATTGCAGCCCAAGCTGCTTTGCTGTGGCCTATGTTTATCTTCATCGCTTTGTTCAGCGCCACCAGCCTTCTCATTTTCTCATTCATTCTTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTTTCTGCCAAGTTCTTGGATGACTTGTATTACAACAATGCCTACTATGCCAAAGTTGGTGGAATAAGCACCATGGAGATGAACCTTCTTGAAGTGGATTTCTTATTCGGTTTGGGATTCCAACTAAACGTGTCACCAAACACTTTTCACATTTACTGCTCCTATCTCCAAACAGAGATGCTATTAGCACAACCCAATCCTCAAATCAAAATACCCAATATAAAACTTCATTCTCTTACTGAAGATGAAACATCTCATCCAAAACAATTGGCAGTTTAA MGSIPKVISYVSNVLERISESNDDGDDEGKLVSRFDGLTKPSISIKSYLERIFKYANCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLLAQPNPQIKIPNIKLHSLTEDETSHPKQLAV Homology
BLAST of Sed0009019 vs. NCBI nr
Match: XP_008453846.1 (PREDICTED: cyclin-U4-1-like [Cucumis melo]) HSP 1 Score: 272.3 bits (695), Expect = 3.1e-69 Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0
BLAST of Sed0009019 vs. NCBI nr
Match: KAA0044685.1 (cyclin-U4-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 272.3 bits (695), Expect = 3.1e-69 Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0
BLAST of Sed0009019 vs. NCBI nr
Match: XP_022140882.1 (cyclin-U4-1-like [Momordica charantia]) HSP 1 Score: 268.5 bits (685), Expect = 4.5e-68 Identity = 141/187 (75.40%), Postives = 157/187 (83.96%), Query Frame = 0
BLAST of Sed0009019 vs. NCBI nr
Match: XP_038900591.1 (cyclin-U4-1-like [Benincasa hispida]) HSP 1 Score: 260.0 bits (663), Expect = 1.6e-65 Identity = 143/193 (74.09%), Postives = 158/193 (81.87%), Query Frame = 0
BLAST of Sed0009019 vs. NCBI nr
Match: XP_004146934.1 (cyclin-U4-1 [Cucumis sativus] >KGN53181.1 hypothetical protein Csa_014857 [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 6.1e-65 Identity = 132/186 (70.97%), Postives = 153/186 (82.26%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-58 Identity = 121/186 (65.05%), Postives = 149/186 (80.11%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.8e-49 Identity = 100/192 (52.08%), Postives = 137/192 (71.35%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.8e-49 Identity = 102/160 (63.75%), Postives = 132/160 (82.50%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: Q9FKF6 (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.8e-48 Identity = 102/158 (64.56%), Postives = 131/158 (82.91%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 2.3e-35 Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A5A7TTH4 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004410 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.5e-69 Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A1S3BYF6 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103494450 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.5e-69 Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A6J1CIA6 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111011438 PE=3 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 2.2e-68 Identity = 141/187 (75.40%), Postives = 157/187 (83.96%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A0A0KZ83 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_4G025110 PE=3 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 2.9e-65 Identity = 132/186 (70.97%), Postives = 153/186 (82.26%), Query Frame = 0
BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A6J1JX61 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111489131 PE=3 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63 Identity = 136/187 (72.73%), Postives = 153/187 (81.82%), Query Frame = 0
BLAST of Sed0009019 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 ) HSP 1 Score: 227.6 bits (579), Expect = 8.2e-60 Identity = 121/186 (65.05%), Postives = 149/186 (80.11%), Query Frame = 0
BLAST of Sed0009019 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 ) HSP 1 Score: 196.4 bits (498), Expect = 2.0e-50 Identity = 102/160 (63.75%), Postives = 132/160 (82.50%), Query Frame = 0
BLAST of Sed0009019 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 ) HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49 Identity = 102/158 (64.56%), Postives = 131/158 (82.91%), Query Frame = 0
BLAST of Sed0009019 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 ) HSP 1 Score: 148.7 bits (374), Expect = 4.8e-36 Identity = 73/160 (45.62%), Postives = 107/160 (66.88%), Query Frame = 0
BLAST of Sed0009019 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 ) HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34 Identity = 73/156 (46.79%), Postives = 104/156 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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