Sed0009019 (gene) Chayote v1

Overview


Name	Sed0009019
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Cyclin
Location	LG07: 9168201 .. 9170590 (-)
RNA-Seq Expression	Sed0009019
Synteny	Sed0009019

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGGCAAGAACAAAAAATGAGCTGTACTTTACCCTCCACCCATTGATAAGTACTCACAGGCAGCAACAAAATCACCAAAAAGAAAGAAAAAAGAAAAGAAAAAAAAGAACCCAATTGAAATGGGTTCAATTCCCAAAGTGATAAGTTATGTTTCAAATGTCTTGGAGAGAATTTCAGAGTCCAATGATGATGGTGATGATGAGGGGAAATTAGTGTCAAGGTTTGATGGATTGACAAAGCCAAGCATTTCAATTAAGAGCTACTTGGAGAGGATTTTCAAGTATGCAAATTGCAGCCCAAGCTGCTTTGCTGTGGCCTATGTTTATCTTCATCGCTTTGTTCAGCGCCACCAGCCTTCTCATTTTCTCATTCATTCTTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTTTCTGCCAAGTTCTTGGATGACTTGTAAGTTCTTTTTTTTTTTTATCAATCTTTGATTTTACTTTTTTTTTTTTGCCTACATTTAGGCTCCATTTGATCATTATTTGTTTTTTTGATTTTTGATTTTTTAAATTTAAATTTATTTTTACTTAAAATTTTTAATTAAATTTTAAAAACAAAAACACCCTTGTGTAAGTTTTTTTTGAAATTTTTTTGTTTAATTTCTAAGATGTAAATATCTATCAAACAAAAAACATATGATAAGGTTGTTATTGTAGATTTAAATTTTAAAAATAAAAGATTAAAAATAAAATTGCTATTAAATGAGTCTTCATTTTTTGTTTTTGTTCTTTTTTATAATTTTTTTGGCTTTGAAATTAAGTTAACTTTAAAGTTTAGTAGTGCTTTGAGTACATTTTCTTTGTTTGATGGTGATTTGGGTTCTTCATTTTGCAAATTTGTATAATGTGAGTCTAACATCAACATTTTTTTTATTCACTAATTTTAGATCAAATCTTAATTTTATTTTTATCGGATTAAATATTGTTTATAAAAGTTGTAAGATCTCATATTTCTAATGTTAGATCTTCAACATTTCTTCATCTTGGGTTCGAATTTTGAAGTTTTTTTTTTTATTGTTTTTTAGTACATCAACTATTTTTAGTGGTTGAAGAATTTGAATCTAAGATCTTTTAGTCGATGATACATGTCAATTACCATTGAATTCAATATACTTTCACTATTTTGTTAAAGTTATGATAGAAGATATTGAGGGATAATTATGTAAAATATAGAATTTTAATATGGGAATGTTTGGAGAAAAAAGTGTTAACATGGAATTTTGAATATATGATGATCGAGGGGTAATTAGGAAAAGTTGTTGGATCTGTTTGCAATTTGAACATAAATCAAATTTTGTGTATTTATTTTTTCTCTTATTTTTGCAGGTATTACAACAATGCCTACTATGCCAAAGTTGGTGGAATAAGCACCATGGAGATGAACCTTCTTGAAGTGGATTTCTTATTCGGTTTGGGATTCCAACTAAACGTGTCACCAAACACTTTTCACATTTACTGCTCCTATCTCCAAACAGAGATGCTATTAGCACAACCCAATCCTCAAATCAAAATACCCAATATAAAACTTCATTCTCTTACTGAAGATGAAACATCTCATCCAAAACAATTGGCAGTTTAAATCAAAACAAATCATTAGAAGGGTGAGTCGTCAAACTATCTTACACGTATTTCGACCTATTCTTATGGTAGAACTACCTGATCCCTATTCCATTTAGTTATAAAGAAACAAGTAGACAAATAATATTTAAATGAATGATTATCATATATTAAACTCATTGTTTCCTAAAAAATGTTTGAGACAAAAAAAAAATGAAAATGATTTCGAAGAAGAGACAAAGAGAATGTGAATGATTATGAGGAATAATTACATTGTCCCGATTTGAATTTCCTCCATAATCAATATTCACTTCCTCATAATTATTATTCATTATCTTCATAATCTCATGCTCTCCCACAAGTAATAGCTCTCTCACAATGGCTCAAACGTTTCTTTAGTGTGTTAATATCTTTTTGACCATTAGGTGAATCCATGATGGTTCTAAAACGACGACATTTTTTTTTTGGTGAAGCAAGATCTATTTGGATGGGCTGTGAGCCTTTTTAGGGTTAAATGTGGGCTTTTTCTCTCAAGCCTTTTGGGCCCTAATTTGACTCCCTTGTAGTTGTTGGACATTTTTGCCCTCCATATCTATATTGTGTAGAATTGTATTATGGTGATTTGTGAGTATTAACTATTTTTGTGAGTGATTTGTAAGTACAAACATTGTATTTCTATATTCAGTCTGTTAGTGAGAGTTTAAATATGGTGTTTTTCTTTCTCAATTTCTAAGAATTAATTTGTGTCAAATTTATATCTTATTTACCTAGTAGAATGTATATATTGATGAACA

mRNA sequence

AAAAGGGCAAGAACAAAAAATGAGCTGTACTTTACCCTCCACCCATTGATAAGTACTCACAGGCAGCAACAAAATCACCAAAAAGAAAGAAAAAAGAAAAGAAAAAAAAGAACCCAATTGAAATGGGTTCAATTCCCAAAGTGATAAGTTATGTTTCAAATGTCTTGGAGAGAATTTCAGAGTCCAATGATGATGGTGATGATGAGGGGAAATTAGTGTCAAGGTTTGATGGATTGACAAAGCCAAGCATTTCAATTAAGAGCTACTTGGAGAGGATTTTCAAGTATGCAAATTGCAGCCCAAGCTGCTTTGCTGTGGCCTATGTTTATCTTCATCGCTTTGTTCAGCGCCACCAGCCTTCTCATTTTCTCATTCATTCTTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTTTCTGCCAAGTTCTTGGATGACTTGTATTACAACAATGCCTACTATGCCAAAGTTGGTGGAATAAGCACCATGGAGATGAACCTTCTTGAAGTGGATTTCTTATTCGGTTTGGGATTCCAACTAAACGTGTCACCAAACACTTTTCACATTTACTGCTCCTATCTCCAAACAGAGATGCTATTAGCACAACCCAATCCTCAAATCAAAATACCCAATATAAAACTTCATTCTCTTACTGAAGATGAAACATCTCATCCAAAACAATTGGCAGTTTAAATCAAAACAAATCATTAGAAGGGTGAATCCATGATGGTTCTAAAACGACGACATTTTTTTTTTGGTGAAGCAAGATCTATTTGGATGGGCTGTGAGCCTTTTTAGGGTTAAATGTGGGCTTTTTCTCTCAAGCCTTTTGGGCCCTAATTTGACTCCCTTGTAGTTGTTGGACATTTTTGCCCTCCATATCTATATTGTGTAGAATTGTATTATGGTGATTTGTGAGTATTAACTATTTTTGTGAGTGATTTGTAAGTACAAACATTGTATTTCTATATTCAGTCTGTTAGTGAGAGTTTAAATATGGTGTTTTTCTTTCTCAATTTCTAAGAATTAATTTGTGTCAAATTTATATCTTATTTACCTAGTAGAATGTATATATTGATGAACA

Coding sequence (CDS)

ATGGGTTCAATTCCCAAAGTGATAAGTTATGTTTCAAATGTCTTGGAGAGAATTTCAGAGTCCAATGATGATGGTGATGATGAGGGGAAATTAGTGTCAAGGTTTGATGGATTGACAAAGCCAAGCATTTCAATTAAGAGCTACTTGGAGAGGATTTTCAAGTATGCAAATTGCAGCCCAAGCTGCTTTGCTGTGGCCTATGTTTATCTTCATCGCTTTGTTCAGCGCCACCAGCCTTCTCATTTTCTCATTCATTCTTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTTTCTGCCAAGTTCTTGGATGACTTGTATTACAACAATGCCTACTATGCCAAAGTTGGTGGAATAAGCACCATGGAGATGAACCTTCTTGAAGTGGATTTCTTATTCGGTTTGGGATTCCAACTAAACGTGTCACCAAACACTTTTCACATTTACTGCTCCTATCTCCAAACAGAGATGCTATTAGCACAACCCAATCCTCAAATCAAAATACCCAATATAAAACTTCATTCTCTTACTGAAGATGAAACATCTCATCCAAAACAATTGGCAGTTTAA

Protein sequence

MGSIPKVISYVSNVLERISESNDDGDDEGKLVSRFDGLTKPSISIKSYLERIFKYANCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLLAQPNPQIKIPNIKLHSLTEDETSHPKQLAV

Homology

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BLAST of Sed0009019 vs. NCBI nr
Match: XP_008453846.1 (PREDICTED: cyclin-U4-1-like [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 3.1e-69
Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 1   MGSIPKVISYVSNVLERISESNDDGD------DEGKLVSRFDGLTKPSISIKSYLERIFK 60
           M  IPKVI+Y+S+VL+R+SESND  D       +    S FDG+++PSISI+SYLERIFK
Sbjct: 10  MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK 69

Query: 61  YANCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYY 120
           YANCSPSCF VAYVYLHRF+  H PS+F I SFNVHRLLITSVLVSAKF DDLYYNNAYY
Sbjct: 70  YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 129

Query: 121 AKVGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL-AQPNPQIKIPNIK 180
           AKVGGISTMEMNLLE+DFLFGL FQLNVSPNTFHIYCSYLQ+EMLL  QP  QI+ P  +
Sbjct: 130 AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ 189

Query: 181 LHSLTED-ETSHPKQLAV 191
           LHS TED + S  KQL V
Sbjct: 190 LHSFTEDQDASLQKQLTV 207

[Close]

BLAST of Sed0009019 vs. NCBI nr
Match: KAA0044685.1 (cyclin-U4-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 3.1e-69
Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 1   MGSIPKVISYVSNVLERISESNDDGD------DEGKLVSRFDGLTKPSISIKSYLERIFK 60
           M  IPKVI+Y+S+VL+R+SESND  D       +    S FDG+++PSISI+SYLERIFK
Sbjct: 1   MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK 60

Query: 61  YANCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYY 120
           YANCSPSCF VAYVYLHRF+  H PS+F I SFNVHRLLITSVLVSAKF DDLYYNNAYY
Sbjct: 61  YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 120

Query: 121 AKVGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL-AQPNPQIKIPNIK 180
           AKVGGISTMEMNLLE+DFLFGL FQLNVSPNTFHIYCSYLQ+EMLL  QP  QI+ P  +
Sbjct: 121 AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ 180

Query: 181 LHSLTED-ETSHPKQLAV 191
           LHS TED + S  KQL V
Sbjct: 181 LHSFTEDQDASLQKQLTV 198

[Close]

BLAST of Sed0009019 vs. NCBI nr
Match: XP_022140882.1 (cyclin-U4-1-like [Momordica charantia])

HSP 1 Score: 268.5 bits (685), Expect = 4.5e-68
Identity = 141/187 (75.40%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 4   IPKVISYVSNVLERISESNDDGDDEGKLVSRFDGLTKPSISIKSYLERIFKYANCSPSCF 63
           IP+VI+++S++L+R+SESNDDG    K +S F GLT+P+ISI SYL+RIFKYANCSPSCF
Sbjct: 11  IPRVITFLSSLLQRVSESNDDGGQAPK-ISAFHGLTRPAISIHSYLQRIFKYANCSPSCF 70

Query: 64  AVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGISTM 123
            VAYVYL RFVQ+H PS   I SFNVHRLLITSVL SAKFLDDLYYNNAYYAKVGGISTM
Sbjct: 71  VVAYVYLDRFVQQH-PS-LPIDSFNVHRLLITSVLXSAKFLDDLYYNNAYYAKVGGISTM 130

Query: 124 EMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLLAQPNPQIKIPNIKLHSLTEDETS 183
           EMNLLEVDFLFGLGFQLNV+PNTFH YCSYLQTEMLL QPN Q K   +K     EDETS
Sbjct: 131 EMNLLEVDFLFGLGFQLNVTPNTFHTYCSYLQTEMLLTQPNLQTK-TLLKFRPFVEDETS 190

Query: 184 HPKQLAV 191
           H +QL V
Sbjct: 191 HQRQLTV 193

[Close]

BLAST of Sed0009019 vs. NCBI nr
Match: XP_038900591.1 (cyclin-U4-1-like [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.6e-65
Identity = 143/193 (74.09%), Postives = 158/193 (81.87%), Query Frame = 0


Query: 1   MGSIPKVISYVSNVLERISESNDDGD-----DEGKLVSRFDGLTKPSISIKSYLERIFKY 60
           M  IPKVIS +S++LER+SESND        D+ K+VS F GL++PSISIKSYLERIFKY
Sbjct: 8   MAGIPKVISLMSSILERVSESNDQKRRTRELDDTKIVSGFYGLSRPSISIKSYLERIFKY 67

Query: 61  ANCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYA 120
           ANCSPSCF VAYVYLHRF+  +QPS F I SFNVHRLLITSVL+SAKFLDDLYYNNAYYA
Sbjct: 68  ANCSPSCFVVAYVYLHRFL-HNQPS-FSIDSFNVHRLLITSVLLSAKFLDDLYYNNAYYA 127

Query: 121 KVGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL-AQPNPQIKIPNIKL 180
           KVGGISTMEMNLLE+DFLFGL FQLNVSPNTFHIYCSYLQ+EMLL  QP  QI       
Sbjct: 128 KVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIH------ 187

Query: 181 HSLTEDETSHPKQ 188
           HS T++ETS  KQ
Sbjct: 188 HSFTDEETSLKKQ 192

[Close]

BLAST of Sed0009019 vs. NCBI nr
Match: XP_004146934.1 (cyclin-U4-1 [Cucumis sativus] >KGN53181.1 hypothetical protein Csa_014857 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 6.1e-65
Identity = 132/186 (70.97%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 1   MGSIPKVISYVSNVLERISESNDDGDDEGKLVSR-----FDGLTKPSISIKSYLERIFKY 60
           M  IPKVI+Y+S+VL+R+S+SN   D E +++++     FDG+++PSISI+SYLERIFKY
Sbjct: 7   MVGIPKVINYLSSVLQRVSDSN---DKENRMITKRNNSGFDGISRPSISIQSYLERIFKY 66

Query: 61  ANCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYA 120
           ANCSPSCF  AYVYLHRF+  H PS+  I SFNVHRLLITSVLVSAKF DDLYYNNAYYA
Sbjct: 67  ANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYA 126

Query: 121 KVGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEML-LAQPNPQIKIPNIKL 180
           KVGGISTMEMN LE+DFLFGL FQLNVSPNTFHIYCSYLQ+EML   QP  QI+ P  +L
Sbjct: 127 KVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPIEQL 186

[Close]

BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-58
Identity = 121/186 (65.05%), Postives = 149/186 (80.11%), Query Frame = 0


Query: 6   KVISYVSNVLERISESND---DGDDEGKLVSRFDGLTKPSISIKSYLERIFKYANCSPSC 65
           K+I+++S++LER++ESND       + + VS F GL++P+I+I+SYLERIFKYANCSPSC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 66  FAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGIST 125
           F VAYVYL RF  R QPS   I+SFNVHRLLITSV+V+AKFLDDLYYNNAYYAKVGGIST
Sbjct: 72  FVVAYVYLDRFTHR-QPS-LPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGIST 131

Query: 126 MEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLLAQPNPQIKIPNIK-LHSLTEDE 185
            EMN LE+DFLFGLGF+LNV+PNTF+ Y SYLQ EM L QP   + +P+ + L +  +DE
Sbjct: 132 KEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPSSRSLITFNDDE 191

Query: 186 TSHPKQ 188
            SH KQ
Sbjct: 192 ASHQKQ 195

[Close]

BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-49
Identity = 100/192 (52.08%), Postives = 137/192 (71.35%), Query Frame = 0


Query: 3   SIPKVISYVSNVLERISESNDDG------DDEGKLVSRFDGLTKPSISIKSYLERIFKYA 62
           ++P+V++ +S++L+R++E ND         +E   VS F GLTKP+ISI  YLERIF++A
Sbjct: 9   AVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERIFRFA 68

Query: 63  NCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAK 122
           NCSPSC+ VAY+YL RF++R +P+   + SFNVHRLLITSVL + KF+DD+ YNNAY+A+
Sbjct: 69  NCSPSCYVVAYIYLDRFLRR-RPA-LAVDSFNVHRLLITSVLTAVKFVDDICYNNAYFAR 128

Query: 123 VGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLLAQPNPQIKIPNIKLHS 182
           VGGIS MEMN LEVDFLFG+ F LNV+P  F  YC+ LQ+EM   +  P + +P +    
Sbjct: 129 VGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPPAVDLPRLHCCP 188

Query: 183 LTEDETS-HPKQ 188
             +D+   H KQ
Sbjct: 189 SDQDDAGCHHKQ 198

[Close]

BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-49
Identity = 102/160 (63.75%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 4   IPKVISYVSNVLERISESNDDGD---DEGKLVSRFDGLTKPSISIKSYLERIFKYANCSP 63
           +P VI+ +S++L+R+SE+NDD      E K +S F+ +TKPSISI+SY+ERIFKYA+CS 
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSD 79

Query: 64  SCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGI 123
           SC+ VAY+YL RF+Q+ QP    I S NVHRL+ITSVLVSAKF+DDL YNNA+YAKVGGI
Sbjct: 80  SCYIVAYIYLDRFIQK-QPL-LPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGI 139

Query: 124 STMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL 161
           +T EMNLLE+DFLFG+GFQLNV+ +T++ YCS LQ EM++
Sbjct: 140 TTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

[Close]

BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: Q9FKF6 (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-48
Identity = 102/158 (64.56%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 4   IPKVISYVSNVLERISESNDDGDDEGKLVSRFDGLTKPSISIKSYLERIFKYANCSPSCF 63
           +P V++ +S +L+R+SE+ND+   + K  S F G+TKPSISI+SYLERIF+YANCS SC+
Sbjct: 22  MPSVLTAMSYLLQRVSETNDNLSQKQK-PSSFTGVTKPSISIRSYLERIFEYANCSYSCY 81

Query: 64  AVAYVYLHRFVQRHQPSHFL-IHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGIST 123
            VAY+YL RFV++ QP  FL I+SFNVHRL+ITSVLVSAKF+DDL YNN YYAKVGGIS 
Sbjct: 82  IVAYIYLDRFVKK-QP--FLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGISR 141

Query: 124 MEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL 161
            EMN+LE+DFLFG+GF+LNV+ +TF+ YC +LQ EM +
Sbjct: 142 EEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAM 175

[Close]

BLAST of Sed0009019 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-35
Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 0


Query: 5   PKVISYVSNVLERISESNDDGDDEGKLVSR---FDGLTKPSISIKSYLERIFKYANCSPS 64
           PKV+  ++  L+R  + N+D  D  K+      F G   P +SIK Y ERIFKY+ CSPS
Sbjct: 36  PKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLYAERIFKYSECSPS 95

Query: 65  CFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGIS 124
           CF +A +Y+ R++Q  QP H  + S +VHRLLITSV+V+AKF DD ++NNA+YA+VGGIS
Sbjct: 96  CFVLALIYMERYLQ--QP-HVYMTSLSVHRLLITSVVVAAKFTDDAFFNNAFYARVGGIS 155

Query: 125 TMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL 161
           T+EMN LE+D LF L F+L V   TF  YC  L+ E ++
Sbjct: 156 TVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMV 191

[Close]

BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A5A7TTH4 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004410 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.5e-69
Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 1   MGSIPKVISYVSNVLERISESNDDGD------DEGKLVSRFDGLTKPSISIKSYLERIFK 60
           M  IPKVI+Y+S+VL+R+SESND  D       +    S FDG+++PSISI+SYLERIFK
Sbjct: 1   MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK 60

Query: 61  YANCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYY 120
           YANCSPSCF VAYVYLHRF+  H PS+F I SFNVHRLLITSVLVSAKF DDLYYNNAYY
Sbjct: 61  YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 120

Query: 121 AKVGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL-AQPNPQIKIPNIK 180
           AKVGGISTMEMNLLE+DFLFGL FQLNVSPNTFHIYCSYLQ+EMLL  QP  QI+ P  +
Sbjct: 121 AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ 180

Query: 181 LHSLTED-ETSHPKQLAV 191
           LHS TED + S  KQL V
Sbjct: 181 LHSFTEDQDASLQKQLTV 198

[Close]

BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A1S3BYF6 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103494450 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.5e-69
Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 1   MGSIPKVISYVSNVLERISESNDDGD------DEGKLVSRFDGLTKPSISIKSYLERIFK 60
           M  IPKVI+Y+S+VL+R+SESND  D       +    S FDG+++PSISI+SYLERIFK
Sbjct: 10  MVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSYLERIFK 69

Query: 61  YANCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYY 120
           YANCSPSCF VAYVYLHRF+  H PS+F I SFNVHRLLITSVLVSAKF DDLYYNNAYY
Sbjct: 70  YANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 129

Query: 121 AKVGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL-AQPNPQIKIPNIK 180
           AKVGGISTMEMNLLE+DFLFGL FQLNVSPNTFHIYCSYLQ+EMLL  QP  QI+ P  +
Sbjct: 130 AKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQIQTPIKQ 189

Query: 181 LHSLTED-ETSHPKQLAV 191
           LHS TED + S  KQL V
Sbjct: 190 LHSFTEDQDASLQKQLTV 207

[Close]

BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A6J1CIA6 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111011438 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.2e-68
Identity = 141/187 (75.40%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 4   IPKVISYVSNVLERISESNDDGDDEGKLVSRFDGLTKPSISIKSYLERIFKYANCSPSCF 63
           IP+VI+++S++L+R+SESNDDG    K +S F GLT+P+ISI SYL+RIFKYANCSPSCF
Sbjct: 11  IPRVITFLSSLLQRVSESNDDGGQAPK-ISAFHGLTRPAISIHSYLQRIFKYANCSPSCF 70

Query: 64  AVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGISTM 123
            VAYVYL RFVQ+H PS   I SFNVHRLLITSVL SAKFLDDLYYNNAYYAKVGGISTM
Sbjct: 71  VVAYVYLDRFVQQH-PS-LPIDSFNVHRLLITSVLXSAKFLDDLYYNNAYYAKVGGISTM 130

Query: 124 EMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLLAQPNPQIKIPNIKLHSLTEDETS 183
           EMNLLEVDFLFGLGFQLNV+PNTFH YCSYLQTEMLL QPN Q K   +K     EDETS
Sbjct: 131 EMNLLEVDFLFGLGFQLNVTPNTFHTYCSYLQTEMLLTQPNLQTK-TLLKFRPFVEDETS 190

Query: 184 HPKQLAV 191
           H +QL V
Sbjct: 191 HQRQLTV 193

[Close]

BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A0A0KZ83 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_4G025110 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.9e-65
Identity = 132/186 (70.97%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 1   MGSIPKVISYVSNVLERISESNDDGDDEGKLVSR-----FDGLTKPSISIKSYLERIFKY 60
           M  IPKVI+Y+S+VL+R+S+SN   D E +++++     FDG+++PSISI+SYLERIFKY
Sbjct: 7   MVGIPKVINYLSSVLQRVSDSN---DKENRMITKRNNSGFDGISRPSISIQSYLERIFKY 66

Query: 61  ANCSPSCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYA 120
           ANCSPSCF  AYVYLHRF+  H PS+  I SFNVHRLLITSVLVSAKF DDLYYNNAYYA
Sbjct: 67  ANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYA 126

Query: 121 KVGGISTMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEML-LAQPNPQIKIPNIKL 180
           KVGGISTMEMN LE+DFLFGL FQLNVSPNTFHIYCSYLQ+EML   QP  QI+ P  +L
Sbjct: 127 KVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPIEQL 186

[Close]

BLAST of Sed0009019 vs. ExPASy TrEMBL
Match: A0A6J1JX61 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111489131 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 136/187 (72.73%), Postives = 153/187 (81.82%), Query Frame = 0


Query: 4   IPKVISYVSNVLERISESNDDGDD--EGKLVSRFDGLTKPSISIKSYLERIFKYANCSPS 63
           IPKVI+++S++L+R+SESND   +      VS F GLTKP+ISI++YLERIFKYANCSPS
Sbjct: 14  IPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTYLERIFKYANCSPS 73

Query: 64  CFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGIS 123
           CF VAYVYL R VQRH PS   I SFNVHRLLITSVLVSAKFLDDL YNNAYYAKVGGIS
Sbjct: 74  CFVVAYVYLDRLVQRH-PS-LPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVGGIS 133

Query: 124 TMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLLAQPNPQIKIPNIKLHSLTEDE 183
           TMEMNLLE+DFLFGLGFQLNV+PNTFH YCSYL+ E+L  Q N  + IP IK +S  EDE
Sbjct: 134 TMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEVLSTQSN--LPIP-IKFYSFPEDE 193

Query: 184 TSHPKQL 189
            SH KQL
Sbjct: 194 ASHKKQL 195

[Close]

BLAST of Sed0009019 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 227.6 bits (579), Expect = 8.2e-60
Identity = 121/186 (65.05%), Postives = 149/186 (80.11%), Query Frame = 0


Query: 6   KVISYVSNVLERISESND---DGDDEGKLVSRFDGLTKPSISIKSYLERIFKYANCSPSC 65
           K+I+++S++LER++ESND       + + VS F GL++P+I+I+SYLERIFKYANCSPSC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 66  FAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGIST 125
           F VAYVYL RF  R QPS   I+SFNVHRLLITSV+V+AKFLDDLYYNNAYYAKVGGIST
Sbjct: 72  FVVAYVYLDRFTHR-QPS-LPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGIST 131

Query: 126 MEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLLAQPNPQIKIPNIK-LHSLTEDE 185
            EMN LE+DFLFGLGF+LNV+PNTF+ Y SYLQ EM L QP   + +P+ + L +  +DE
Sbjct: 132 KEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPSSRSLITFNDDE 191

Query: 186 TSHPKQ 188
            SH KQ
Sbjct: 192 ASHQKQ 195

[Close]

BLAST of Sed0009019 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-50
Identity = 102/160 (63.75%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 4   IPKVISYVSNVLERISESNDDGD---DEGKLVSRFDGLTKPSISIKSYLERIFKYANCSP 63
           +P VI+ +S++L+R+SE+NDD      E K +S F+ +TKPSISI+SY+ERIFKYA+CS 
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSD 79

Query: 64  SCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGI 123
           SC+ VAY+YL RF+Q+ QP    I S NVHRL+ITSVLVSAKF+DDL YNNA+YAKVGGI
Sbjct: 80  SCYIVAYIYLDRFIQK-QPL-LPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGI 139

Query: 124 STMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL 161
           +T EMNLLE+DFLFG+GFQLNV+ +T++ YCS LQ EM++
Sbjct: 140 TTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

[Close]

BLAST of Sed0009019 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 )

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49
Identity = 102/158 (64.56%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 4   IPKVISYVSNVLERISESNDDGDDEGKLVSRFDGLTKPSISIKSYLERIFKYANCSPSCF 63
           +P V++ +S +L+R+SE+ND+   + K  S F G+TKPSISI+SYLERIF+YANCS SC+
Sbjct: 22  MPSVLTAMSYLLQRVSETNDNLSQKQK-PSSFTGVTKPSISIRSYLERIFEYANCSYSCY 81

Query: 64  AVAYVYLHRFVQRHQPSHFL-IHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGIST 123
            VAY+YL RFV++ QP  FL I+SFNVHRL+ITSVLVSAKF+DDL YNN YYAKVGGIS 
Sbjct: 82  IVAYIYLDRFVKK-QP--FLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGISR 141

Query: 124 MEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL 161
            EMN+LE+DFLFG+GF+LNV+ +TF+ YC +LQ EM +
Sbjct: 142 EEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAM 175

[Close]

BLAST of Sed0009019 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 148.7 bits (374), Expect = 4.8e-36
Identity = 73/160 (45.62%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 5   PKVISYVSNVLERISESND----DGDDEGKLVSRFDGLTKPSISIKSYLERIFKYANCSP 64
           P+V++ +S+V+E++   N+         GK +  F G+  PSISI  YLERI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 65  SCFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGI 124
           +CF V YVY+ R   +H  S  L+ S NVHRLL+T V+++AK LDD++YNN +YA+VGG+
Sbjct: 85  ACFVVGYVYIDRLAHKHPGS--LVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 144

Query: 125 STMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTEMLL 161
           S  ++N +E++ LF L F++ VS   F  YC +L+ EM L
Sbjct: 145 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

[Close]

BLAST of Sed0009019 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 73/156 (46.79%), Postives = 104/156 (66.67%), Query Frame = 0


Query: 5   PKVISYVSNVLERISESNDDGD---DEGKLVSRFDGLTKPSISIKSYLERIFKYANCSPS 64
           P V+S +S+ LER    N D          V+ FDG + P ISI  YL+RIFKY+ CSPS
Sbjct: 32  PTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHYLDRIFKYSCCSPS 91

Query: 65  CFAVAYVYLHRFVQRHQPSHFLIHSFNVHRLLITSVLVSAKFLDDLYYNNAYYAKVGGIS 124
           CF +A++Y+  F+ +   +  L+   NVHRL+IT+V+++AK  DD Y+NNAYYA+VGG++
Sbjct: 92  CFVIAHIYIDHFLHK---TRALLKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARVGGVT 151

Query: 125 TMEMNLLEVDFLFGLGFQLNVSPNTFHIYCSYLQTE 158
           T E+N LE++ LF L F+L V P TFH +C  L+ +
Sbjct: 152 TRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

The following BLAST results are available for this feature:

BLAST of Sed0009019 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453846.1	3.1e-69	72.73	PREDICTED: cyclin-U4-1-like [Cucumis melo]	[more]
KAA0044685.1	3.1e-69	72.73	cyclin-U4-1-like [Cucumis melo var. makuwa]	[more]
XP_022140882.1	4.5e-68	75.40	cyclin-U4-1-like [Momordica charantia]	[more]
XP_038900591.1	1.6e-65	74.09	cyclin-U4-1-like [Benincasa hispida]	[more]
XP_004146934.1	6.1e-65	70.97	cyclin-U4-1 [Cucumis sativus] >KGN53181.1 hypothetical protein Csa_014857 [Cucum...	[more]

BLAST of Sed0009019 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80513	1.2e-58	65.05	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q7XC35	2.8e-49	52.08	Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1	[more]
Q9LY16	2.8e-49	63.75	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]
Q9FKF6	1.8e-48	64.56	Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1	[more]
Q75HV0	2.3e-35	50.31	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]

BLAST of Sed0009019 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TTH4	1.5e-69	72.73	Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004410 PE=3 SV...	[more]
A0A1S3BYF6	1.5e-69	72.73	Cyclin OS=Cucumis melo OX=3656 GN=LOC103494450 PE=3 SV=1	[more]
A0A6J1CIA6	2.2e-68	75.40	Cyclin OS=Momordica charantia OX=3673 GN=LOC111011438 PE=3 SV=1	[more]
A0A0A0KZ83	2.9e-65	70.97	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_4G025110 PE=3 SV=1	[more]
A0A6J1JX61	1.6e-63	72.73	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111489131 PE=3 SV=1	[more]

BLAST of Sed0009019 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44740.1	8.2e-60	65.05	cyclin p4;1	[more]
AT5G07450.1	2.0e-50	63.75	cyclin p4;3	[more]
AT5G61650.1	1.3e-49	64.56	CYCLIN P4;2	[more]
AT3G21870.1	4.8e-36	45.63	cyclin p2;1	[more]
AT3G63120.1	1.6e-34	46.79	cyclin p1;1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 31..140 e-value: 2.5E-38 score: 132.0
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 2..189 e-value: 1.0E-70 score: 235.8
None	No IPR available	GENE3D	1.10.472.10		coord: 2..187 e-value: 2.8E-52 score: 179.4
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 3..190
None	No IPR available	PANTHER	PTHR15615:SF101	CYCLIN	coord: 3..190
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 43..128 e-value: 0.00292324 score: 33.7513
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 48..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009019.1	Sed0009019.1	mRNA
Sed0009019.2	Sed0009019.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0019901	protein kinase binding