Lsi06G010520 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACTCCTTACTCAGATCCGTCTACCACGGCTGTATCGCCGGCTGCGACGCCGAGATCGACCGCCGTCCTTACCACAAGAACTGCAGCTGTGCTCTTCACGATCGAGATAACAGACGCTGTTCCCACTCCATGTCTAAACACAAATCCGTCTCGTACCCGATTAGACGAGCCTGGAGTGAAGGATGCTTGGCTATGGTTGCTGCTACTGCTGCTTCTGGCATTTCTTCTCCCTCTTCTTCTCCTTCTTCTTCTTCGCCGTCCATGGAGGTTGAAAGCCTTGGATCTTACAAGAGATGA ATGGCCGACTCCTTACTCAGATCCGTCTACCACGGCTGTATCGCCGGCTGCGACGCCGAGATCGACCGCCGTCCTTACCACAAGAACTGCAGCTGTGCTCTTCACGATCGAGATAACAGACGCTGTTCCCACTCCATGTCTAAACACAAATCCGTCTCGTACCCGATTAGACGAGCCTGGAGTGAAGGATGCTTGGCTATGGTTGCTGCTACTGCTGCTTCTGGCATTTCTTCTCCCTCTTCTTCTCCTTCTTCTTCTTCGCCGTCCATGGAGGTTGAAAGCCTTGGATCTTACAAGAGATGA ATGGCCGACTCCTTACTCAGATCCGTCTACCACGGCTGTATCGCCGGCTGCGACGCCGAGATCGACCGCCGTCCTTACCACAAGAACTGCAGCTGTGCTCTTCACGATCGAGATAACAGACGCTGTTCCCACTCCATGTCTAAACACAAATCCGTCTCGTACCCGATTAGACGAGCCTGGAGTGAAGGATGCTTGGCTATGGTTGCTGCTACTGCTGCTTCTGGCATTTCTTCTCCCTCTTCTTCTCCTTCTTCTTCTTCGCCGTCCATGGAGGTTGAAAGCCTTGGATCTTACAAGAGATGA MADSLLRSVYHGCIAGCDAEIDRRPYHKNCSCALHDRDNRRCSHSMSKHKSVSYPIRRAWSEGCLAMVAATAASGISSPSSSPSSSSPSMEVESLGSYKR Homology
BLAST of Lsi06G010520 vs. ExPASy TrEMBL
Match: A0A1S3B9X6 (uncharacterized protein LOC103487382 OS=Cucumis melo OX=3656 GN=LOC103487382 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.0e-37 Identity = 85/101 (84.16%), Postives = 90/101 (89.11%), Query Frame = 0
BLAST of Lsi06G010520 vs. ExPASy TrEMBL
Match: A0A0A0LWK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265650 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.1e-34 Identity = 83/101 (82.18%), Postives = 87/101 (86.14%), Query Frame = 0
BLAST of Lsi06G010520 vs. ExPASy TrEMBL
Match: A0A061GQ94 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038276 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.6e-22 Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Lsi06G010520 vs. ExPASy TrEMBL
Match: A0A6P5ZAR1 (uncharacterized protein LOC111299002 OS=Durio zibethinus OX=66656 GN=LOC111299002 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 8.0e-22 Identity = 54/83 (65.06%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of Lsi06G010520 vs. ExPASy TrEMBL
Match: A0A6J0ZQ85 (uncharacterized protein LOC110411242 OS=Herrania umbratica OX=108875 GN=LOC110411242 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 5.2e-21 Identity = 55/85 (64.71%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of Lsi06G010520 vs. NCBI nr
Match: XP_008443899.1 (PREDICTED: uncharacterized protein LOC103487382 [Cucumis melo]) HSP 1 Score: 163.7 bits (413), Expect = 8.2e-37 Identity = 85/101 (84.16%), Postives = 90/101 (89.11%), Query Frame = 0
BLAST of Lsi06G010520 vs. NCBI nr
Match: KAG6587850.1 (hypothetical protein SDJN03_16415, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150.6 bits (379), Expect = 7.2e-33 Identity = 79/100 (79.00%), Postives = 83/100 (83.00%), Query Frame = 0
BLAST of Lsi06G010520 vs. NCBI nr
Match: KAE8653037.1 (hypothetical protein Csa_019637 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30 Identity = 76/97 (78.35%), Postives = 82/97 (84.54%), Query Frame = 0
BLAST of Lsi06G010520 vs. NCBI nr
Match: XP_007013703.2 (PREDICTED: uncharacterized protein LOC18588916 [Theobroma cacao]) HSP 1 Score: 114.0 bits (284), Expect = 7.5e-22 Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Lsi06G010520 vs. NCBI nr
Match: EOY31322.1 (Uncharacterized protein TCM_038276 [Theobroma cacao]) HSP 1 Score: 114.0 bits (284), Expect = 7.5e-22 Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Lsi06G010520 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 79.3 bits (194), Expect = 1.9e-15 Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of Lsi06G010520 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 8.0e-14 Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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