Lsi06G008220 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G008220
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	S-protein homolog
Location	chr06: 17450814 .. 17451257 (+)
RNA-Seq Expression	Lsi06G008220
Synteny	Lsi06G008220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCATCTCCAGCACTTGCACTATCTTTGTTAATCTTTTTTTTCACTAGCCTACATGCCATTCAAGGAGCATTCTTAATTCCACCAGAAACTACGGTCACAATTGTCAACCAAATTGAATATGGCATACCAGTCAACGTTCATTGCAAATCCAAGAACGACGACCTAGGAGTCCATATCCTTCCGCTTGGACAAAGCTACTCGTTCAGGTTCAGACCCAACCTCGTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACCCCAAATCTACTGGTTCGATGTCTTCAACCACAAGAGAGATGCAGGGCTTTGCACCACATGCCAATGGATCATTCATGAATATAGTATATGCCTGCAGAACCCAAAAACTGCTGACGGAAAACAAATTTGCTATAACTACGGAGATAAGGAGCCAACAAGCATTATGTAA

mRNA sequence

ATGGCTTCATCTCCAGCACTTGCACTATCTTTGTTAATCTTTTTTTTCACTAGCCTACATGCCATTCAAGGAGCATTCTTAATTCCACCAGAAACTACGGTCACAATTGTCAACCAAATTGAATATGGCATACCAGTCAACGTTCATTGCAAATCCAAGAACGACGACCTAGGAGTCCATATCCTTCCGCTTGGACAAAGCTACTCGTTCAGGTTCAGACCCAACCTCGTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACCCCAAATCTACTGGTTCGATGTCTTCAACCACAAGAGAGATGCAGGGCTTTGCACCACATGCCAATGGATCATTCATGAATATAGTATATGCCTGCAGAACCCAAAAACTGCTGACGGAAAACAAATTTGCTATAACTACGGAGATAAGGAGCCAACAAGCATTATGTAA

Coding sequence (CDS)

ATGGCTTCATCTCCAGCACTTGCACTATCTTTGTTAATCTTTTTTTTCACTAGCCTACATGCCATTCAAGGAGCATTCTTAATTCCACCAGAAACTACGGTCACAATTGTCAACCAAATTGAATATGGCATACCAGTCAACGTTCATTGCAAATCCAAGAACGACGACCTAGGAGTCCATATCCTTCCGCTTGGACAAAGCTACTCGTTCAGGTTCAGACCCAACCTCGTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACCCCAAATCTACTGGTTCGATGTCTTCAACCACAAGAGAGATGCAGGGCTTTGCACCACATGCCAATGGATCATTCATGAATATAGTATATGCCTGCAGAACCCAAAAACTGCTGACGGAAAACAAATTTGCTATAACTACGGAGATAAGGAGCCAACAAGCATTATGTAA

Protein sequence

MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVHILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYSICLQNPKTADGKQICYNYGDKEPTSIM

Homology

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BLAST of Lsi06G008220 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-20
Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 0


Query: 9   LSLLIFFFTSLHAIQGAFLIPP---ETTVTIVNQIEYGIPVNVHCKSKNDDLGVHILPLG 68
           +S++ FFF  L    G   +PP    T VT+ N I  G P+ +HCKSK DDLG+H++P  
Sbjct: 4   VSIVCFFFFLLFG-SGYGGLPPFWRATVVTMTNLIG-GPPLTIHCKSKQDDLGIHVVPFK 63

Query: 69  QSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYSIC 123
           Q Y F+F+PNL  +TLF+CSF W    Q   FD+++ +RD G+C  CQW I     C
Sbjct: 64  QEYHFKFQPNLWKSTLFFCSFQW--DSQFKSFDIYDAQRDQGICDDCQWEIKPDGPC 116

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BLAST of Lsi06G008220 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 31  ETTVTIVNQIEYGIPVNVHCKSKNDDLGVHILPLGQSYSFRFRPNLV-GTTLFYCSFVWT 90
           ++ VTI N++  G  + +HCKS +DDLG+ IL    S+SF+FRP++V G TLF+C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 91  GQPQIYWFDVFNHKRDA---GL-CTTCQWIIHEYSICLQNPKTADGKQICYNY 139
           GQ +  WF++++  RD    G+ C  C W I +Y  C +  +  D   ICY++
Sbjct: 97  GQSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDW 146

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BLAST of Lsi06G008220 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.0e-17
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 7   LALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVHILPLGQ 66
           + LS+++F+  S       F    +T VT+ N I     + + C+SK+DDLG H+L  GQ
Sbjct: 9   VVLSIILFYVISSCHGYNPF---AKTVVTVTNNISPQTTLTISCRSKDDDLGEHLLLHGQ 68

Query: 67  SYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYSICL 124
           ++ ++FRP+   TTLF C F+W     + WFD +   RD G C +C W I+  S C+
Sbjct: 69  AFLWKFRPSWFRTTLFTCKFLWNN--NVKWFDTYRSDRDQGHCYSCNWSINADSACI 120

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BLAST of Lsi06G008220 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 0


Query: 34  VTIVNQIEYGIPVNVHCKSKNDDLGVHILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQ 93
           V I N++  G+ +N+HCKS +DDLG+ IL    S+SF+FR ++VGTTLFYC F W GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFDVFNHKRDAG----LCTTCQWIIHEYSICLQNPKTADGKQICYNY 139
              FD+++  RD       C  C W I     C+ + ++     ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

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BLAST of Lsi06G008220 vs. ExPASy Swiss-Prot
Match: B3H7A6 (S-protein homolog 19 OS=Arabidopsis thaliana OX=3702 GN=SPH19 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12
Identity = 42/135 (31.11%), Postives = 63/135 (46.67%), Query Frame = 0


Query: 7   LALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVHILPLGQ 66
           ++++ ++FFF  L   +G         V ++N I   + + +HCKSKN DLG   L   Q
Sbjct: 11  MSVTFMVFFFGGLCEARG-------VNVDLINDIGPNVQLGLHCKSKNKDLGSQSLVSDQ 70

Query: 67  SYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYSICLQNP 126
            + FR        TLF+C F W  Q +  WFD+F   RD      C W     SI    P
Sbjct: 71  HWGFRASLGFWTVTLFFCHFEWENQSK--WFDIFVEDRDLTCGDHCVW-----SIRPSGP 130

Query: 127 KTADGKQICYNYGDK 142
               G++ C+ + +K
Sbjct: 131 CRLTGREKCFPWNNK 131

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BLAST of Lsi06G008220 vs. ExPASy TrEMBL
Match: A0A5D3CQ97 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002410 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  +L AIQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CSF WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+PK   GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

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BLAST of Lsi06G008220 vs. ExPASy TrEMBL
Match: A0A5D3C9Q3 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001780 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 111/146 (76.03%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  +LH IQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CS  WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSITWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+PK   GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

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BLAST of Lsi06G008220 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 111/146 (76.03%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  ++ AIQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CSF WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+PK   GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G008220 vs. ExPASy TrEMBL
Match: A0A5D3CQA2 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00110 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  +L AIQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CSF WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+P T  GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDP-TNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G008220 vs. ExPASy TrEMBL
Match: A0A5A7UYG6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001800 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.4e-61
Identity = 111/146 (76.03%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  ++ AIQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CSF WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+PK   GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G008220 vs. NCBI nr
Match: TYK08032.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 4.1e-61
Identity = 111/146 (76.03%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  +LH IQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CS  WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSITWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+PK   GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G008220 vs. NCBI nr
Match: KAA0063208.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 4.1e-61
Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  +L AIQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CSF WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+PK   GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G008220 vs. NCBI nr
Match: TYK13716.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 4.1e-61
Identity = 111/146 (76.03%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  ++ AIQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CSF WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+PK   GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G008220 vs. NCBI nr
Match: TYK14097.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 4.1e-61
Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  +L AIQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CSF WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+P T  GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDP-TNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G008220 vs. NCBI nr
Match: KAA0059246.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 244.2 bits (622), Expect = 7.0e-61
Identity = 111/146 (76.03%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MASSPALALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVH 60
           M SSP LALSLLIFF  ++ AIQG+  I P TTV IVNQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  ILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYS 120
           +LPLGQ YSF+FRPNLVGTTLF+CSF WTGQ QIYWF++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADGKQICYNYGDKEPTSI 147
           +CLQ+PK   GK ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G008220 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 0


Query: 9   LSLLIFFFTSLHAIQGAFLIPP---ETTVTIVNQIEYGIPVNVHCKSKNDDLGVHILPLG 68
           +S++ FFF  L    G   +PP    T VT+ N I  G P+ +HCKSK DDLG+H++P  
Sbjct: 4   VSIVCFFFFLLFG-SGYGGLPPFWRATVVTMTNLIG-GPPLTIHCKSKQDDLGIHVVPFK 63

Query: 69  QSYSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGLCTTCQWIIHEYSIC 123
           Q Y F+F+PNL  +TLF+CSF W    Q   FD+++ +RD G+C  CQW I     C
Sbjct: 64  QEYHFKFQPNLWKSTLFFCSFQW--DSQFKSFDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of Lsi06G008220 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 30  PETTVTIVNQIEYGIPVNVHCKSKNDDLGVHILPLGQSYSFRFRPNLVGTTLFYCSFVWT 89
           P TTV I N +   +P+  HCKSKNDDLG   + +  ++SF FRP++ G TLF+C F+W 
Sbjct: 26  PRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW- 85

Query: 90  GQPQIYWFDVFNHKRDAGL----CTTCQWIIHEYSICLQNPKTADGKQIC 136
              +++WFD++   RD       C  C+W I +   C  N K ++   +C
Sbjct: 86  -DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLN-KNSNMFDVC 132

[Close]

BLAST of Lsi06G008220 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 31  ETTVTIVNQIEYGIPVNVHCKSKNDDLGVHILPLGQSYSFRFRPNLV-GTTLFYCSFVWT 90
           ++ VTI N++  G  + +HCKS +DDLG+ IL    S+SF+FRP++V G TLF+C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 91  GQPQIYWFDVFNHKRDA---GL-CTTCQWIIHEYSICLQNPKTADGKQICYNY 139
           GQ +  WF++++  RD    G+ C  C W I +Y  C +  +  D   ICY++
Sbjct: 97  GQSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDW 146

[Close]

BLAST of Lsi06G008220 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-17
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 0


Query: 34  VTIVNQIEYGIPVNVHCKSKNDDLGVHILPLGQSYSFRFRPNLVGTTLFYCSFVWTGQPQ 93
           V I N++  G+ +N+HCKS +DDLG+ IL    S+SF+FR ++VGTTLFYC F W GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFDVFNHKRDAG----LCTTCQWIIHEYSICLQNPKTADGKQICYNY 139
              FD+++  RD       C  C W I     C+ + ++     ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

[Close]

BLAST of Lsi06G008220 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 84.3 bits (207), Expect = 8.7e-17
Identity = 45/125 (36.00%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 8   ALSLLIFFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVNVHCKSKNDDLGVHILPLGQS 67
           +L   + FF  +     A +    T+V I N +  G+P+  HCKS+ DDLG   L  G+S
Sbjct: 3   SLETCLLFFVMV-MFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRS 62

Query: 68  YSFRFRPNLVGTTLFYCSFVWTGQPQIYWFDVFNHKRDAGL----CTTCQWIIHEYSICL 127
           +SF F P++ G TLFYC F W  +  I  FD++   RD       C  C+W I +   C 
Sbjct: 63  WSFGFTPDIFGRTLFYCRFSWGAESHI--FDIYKQSRDKEFQEFGCKKCEWKIRKNGPCK 122

Query: 128 QNPKT 129
              KT
Sbjct: 123 FYKKT 124

The following BLAST results are available for this feature:

BLAST of Lsi06G008220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	2.1e-20	44.44	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	1.7e-17	40.71	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	5.0e-17	36.75	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
Q9FMQ4	1.4e-16	40.37	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
B3H7A6	2.2e-12	31.11	S-protein homolog 19 OS=Arabidopsis thaliana OX=3702 GN=SPH19 PE=3 SV=1	[more]

BLAST of Lsi06G008220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQ97	2.0e-61	76.71	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3C9Q3	2.0e-61	76.03	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00...	[more]
A0A5D3CTD8	2.0e-61	76.03	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3CQA2	2.0e-61	76.71	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]
A0A5A7UYG6	3.4e-61	76.03	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00...	[more]

BLAST of Lsi06G008220 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08032.1	4.1e-61	76.03	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0063208.1	4.1e-61	76.71	self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incom...	[more]
TYK13716.1	4.1e-61	76.03	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
TYK14097.1	4.1e-61	76.71	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0059246.1	7.0e-61	76.03	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi06G008220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	1.5e-21	44.44	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	1.4e-19	38.18	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	1.2e-18	40.71	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	1.0e-17	40.37	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	8.7e-17	36.00	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..137 e-value: 2.0E-27 score: 95.8
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 19..131
None	No IPR available	PANTHER	PTHR31232:SF43	S-PROTEIN HOMOLOG 18-RELATED	coord: 19..131
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 30..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G008220.1	Lsi06G008220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen