Homology
BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 1.7e-46
Identity = 112/372 (30.11%), Postives = 183/372 (49.19%), Query Frame = 0
Query: 325 FNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQML 384
+N + S +L LALK+L+ + S P T++I+I +G +D A +++++ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 385 GRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVE 444
RG P+ T ++ CK G +A EMV + G +P V +YN LL+ L G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 445 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLF 504
E +++T+M + P++ TY+ L+ LC+ G+ +EAM LL +E GL P +++ L
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 505 NGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHT 564
+C+EGR I L M C+PD + Y T+L L K GK AL + ++ G +
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 565 IEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMIS 624
+ NT AL W D + H + E M + D TY +I LC M+
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495
Query: 625 EALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLII 684
EA L M + P +T ++V+ C H + N ++G+G + T++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555
Query: 685 NELNKQGMRLSA 697
+ G R A
Sbjct: 556 EGIGFAGYRAEA 562
BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 8.5e-46
Identity = 115/428 (26.87%), Postives = 201/428 (46.96%), Query Frame = 0
Query: 315 KHTEIRNISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELD 374
KH + N + L N ++ AL+LL + G VP++ TF+ +I CK ++
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 375 NAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV------------------- 434
A +++ +ML RG P+D T +L+N CK G+ A ++
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364
Query: 435 -------------EVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDI 494
++V G P V TYN L+ G G V A E++ +M+ P++
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 495 YTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNK 554
Y+YT L+DG CK+G+ DEA +LNE +GLKP+ V FN L + +CKE R + + + +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 555 MKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSW 614
M + C PD T+ +L+ GL + +I+ AL ++M+S G NT + A +R
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG- 544
Query: 615 KEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRA 674
+++A ++ +M +D TY LI+ LC + +A + M+ G++P
Sbjct: 545 ----EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604
Query: 675 ITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGL 711
I+ ++++ LC + + ++ G +F+ +IN L + G ++
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664
BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.6e-44
Identity = 113/367 (30.79%), Postives = 182/367 (49.59%), Query Frame = 0
Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
N+ +N L + ++ KLL +++ GL PN +++++I C++G + VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYV 440
+M RG+ ++ T L+ +CK G +AL M + R G P+V TY L+ +C
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 441 GRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTF 500
G + A E + +M+ L P+ TYT L+DG + G +EA +L E +NG PSVVT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 501 NTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVS 560
N L NG+C G+ D I VL MK+ PD ++Y+T+L G + + ALR +EMV
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 561 SGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSG 620
G + ++ ++ E+ ++A ++E+M D TY LI A C
Sbjct: 479 KGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 538
Query: 621 NMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGH--GIPFSTT 680
+ +AL + M+ KG P +T V++ L + S T A L L + +P T
Sbjct: 539 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGL-NKQSRTREAKRLLLKLFYEESVPSDVT 598
Query: 681 SFDLIIN 686
LI N
Sbjct: 599 YHTLIEN 599
BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 3.6e-44
Identity = 108/391 (27.62%), Postives = 195/391 (49.87%), Query Frame = 0
Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
++S FN L ++L A+ +L ++ SYGLVP+ +TF+ +++ Y ++G+LD A R+
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV-EVVGRIGRKPTVKTYNCLLKGLCY 440
EQM+ G ++ +V +V+ FCK G+ + AL + E+ + G P T+N L+ GLC
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 441 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVT 500
G V+ A E++ M ++ PD+YTY +++ GLCK+G EA+E+L++ P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 501 FNTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMV 560
+NTL + CKE + + + + +PD T+ +L+ GL R+A+ ++EM
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 561 SSGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCS 620
S G + N + +L K L++A + ++M+ TY LI C
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 487
Query: 621 GNMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTS 680
N EA M G S ++T + ++ LC + +A ++ G +
Sbjct: 488 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 547
Query: 681 FDLIINELNKQGMRLSASNVYGLALKRGVNP 711
++ ++ + G A+++ G P
Sbjct: 548 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match:
Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)
HSP 1 Score: 176.4 bits (446), Expect = 1.1e-42
Identity = 114/391 (29.16%), Postives = 179/391 (45.78%), Query Frame = 0
Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
N++ +N + + A LL + G P+ ++S ++ YC+ GELD +++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYV 440
E M +G PN ++ C+ K +A E + R G P Y L+ G C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 441 GRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTF 500
G + A + EM + PD+ TYTA++ G C++G EA +L +E GL+P VTF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 501 NTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVS 560
L NGYCK G D V N M Q C P+ +TYTTL+ GL K G + A EM
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 561 SGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSG 620
G N+ + L K +E+A ++ + + D TY L+ A C
Sbjct: 485 IGLQPNIFTYNSIVNGLCK-----SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 544
Query: 621 NMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEAL-CLLGHGIPFSTTS 680
+ +A L M+GKG P +T +V++ C H + L +L GI + T+
Sbjct: 545 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC-LHGMLEDGEKLLNWMLAKGIAPNATT 604
Query: 681 FDLIINELNKQGMRLSASNVYGLALKRGVNP 711
F+ ++ + + +A+ +Y RGV P
Sbjct: 605 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match:
A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)
HSP 1 Score: 768.8 bits (1984), Expect = 1.9e-218
Identity = 394/496 (79.44%), Postives = 426/496 (85.89%), Query Frame = 0
Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
+RL LRPSFLTTLPLSST TPFGAN E N R S NK+ HS+ SF
Sbjct: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60
Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
PTR+T RIKSLPIPSEEGTEIFIMSQK EI+NI EFNDLFM+FVSE+EL
Sbjct: 61 GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
LALKLLSN++SYGLVPNSRTFSIMIRCYCKKG+LDNA RVL QMLGRG PNDAT+ LV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180
Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
PDIYTYTALMDGLCKVGRSDEAMELL+EAE NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
L KMKQMNC PDRI+Y+TLLHGLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
R+WKEKDLLEDAHQVFEKMK++FQVIDRSTYGLLIQALCSGN SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
P AITIDV+VQ+LC H+GSA+EALC+LGHGI FS SFDLII ELN++GM LSA +V
Sbjct: 421 PWAITIDVMVQALC----HSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSV 480
BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match:
A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)
HSP 1 Score: 766.1 bits (1977), Expect = 1.3e-217
Identity = 390/496 (78.63%), Postives = 424/496 (85.48%), Query Frame = 0
Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
+R+ LRPSFLTTLPLSST TPFGAN EEN RLS NK+ HS+ SF
Sbjct: 1 MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60
Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
PTR+T IKSLPIPSEEGTEIFIMSQK EI+NI EFNDLFM+FVSE+EL
Sbjct: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+L+NA RVL QMLGRG PNDAT+ LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180
Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
R+WKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
PRAITIDV+VQ+LC H+G A+EALC+LGHGI FS SFDL+I ELN++GM SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNV 480
BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match:
A0A6J1DW66 (pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charantia OX=3673 GN=LOC111024057 PE=4 SV=1)
HSP 1 Score: 693.0 bits (1787), Expect = 1.3e-195
Identity = 363/494 (73.48%), Postives = 397/494 (80.36%), Query Frame = 0
Query: 252 LPLSSTYTPFGANLFEENSRLSTNKQSHS---------------IHTALRSFTPTRIT-- 311
LPLSST N EEN RLS NKQSHS + L P RIT
Sbjct: 9 LPLSST----SVNFIEENGRLSPNKQSHSNRNRGPGFGGDNVYALPFKLEIENPRRITVK 68
Query: 312 ----RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELHLALKLLSNISS 371
RI SLP PS+EGTE+FI SQK EI+NISEFNDLF DFVS EL LAL+LLSNISS
Sbjct: 69 NEAGRIGSLPTPSKEGTEMFITSQKDCEIQNISEFNDLFADFVSAEELDLALRLLSNISS 128
Query: 372 YGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQK 431
YGLVPNSRTFSI IRCYCKKG+LDNA RV +QMLG G PNDATV LVNA C+RGK ++
Sbjct: 129 YGLVPNSRTFSIAIRCYCKKGDLDNAKRVFDQMLGSGCNPNDATVTVLVNALCRRGKIKR 188
Query: 432 ALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMD 491
ALEMVE+VGRIGRK TV+TYNCLLKGLCYVGRVEEACEMV +MKKD L+PDIYTYTALMD
Sbjct: 189 ALEMVELVGRIGRKQTVRTYNCLLKGLCYVGRVEEACEMVAKMKKDGLVPDIYTYTALMD 248
Query: 492 GLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQMNCMP 551
GLCKVGRSDEAMELLNEAEENGL+PSVVTFNTLFNGYCKEGRP+DGI+VL KMKQMNCMP
Sbjct: 249 GLCKVGRSDEAMELLNEAEENGLEPSVVTFNTLFNGYCKEGRPLDGIHVLKKMKQMNCMP 308
Query: 552 DRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSWKEKDLLED 611
DRI+YTTLLHGLIKWGKIR ALRTYKEMVSSGH++E KMMNTFMRAL +RSWKEKDLLED
Sbjct: 309 DRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSWKEKDLLED 368
Query: 612 AHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRAITIDVVVQ 671
AHQVFEKMK++FQVI RSTYG++I ALCSGN ISEA+ANLHHMI KGYSPRAITI+VVV+
Sbjct: 369 AHQVFEKMKNEFQVIHRSTYGVVIPALCSGNKISEAVANLHHMIRKGYSPRAITINVVVE 428
Query: 672 SLCHTHSHTGSANEALCLLG---------HGIPFSTTSFDLIINELNKQGMRLSASNVYG 716
+LC GS NEAL ++G H IPFS S+DLII+ELNKQGM A VYG
Sbjct: 429 ALC----RRGSTNEALGVVGLGLVGDGHHHVIPFSRVSYDLIIDELNKQGMWFDACKVYG 488
BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match:
A0A6J5VAX5 (PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS40612 PE=3 SV=1)
HSP 1 Score: 512.3 bits (1318), Expect = 3.3e-141
Identity = 298/632 (47.15%), Postives = 393/632 (62.18%), Query Frame = 0
Query: 90 ALTEEMAVIKKFGDEHSNLLDQYERLSFEARLNQAMLERSLSEPRMLRSQPQVLF--AGS 149
A + A+++ FGD+ S+LLD +ERLS E +LNQAML RSLSEP +RSQ +L A S
Sbjct: 4 AEVNKQAILRTFGDDKSSLLDHFERLSVELKLNQAMLRRSLSEPTQIRSQQPLLICQAPS 63
Query: 150 VQLPYLITTTNQPRKGRCGSTFNFNNLLNNLLKPILERKGRAKKERPHFKNPMDQIEAQF 209
P + R+G F+ +L ++KPIL R KKE P K+P +
Sbjct: 64 ESEPPPPPLVTKKRRGS-----GFSKVLKKMIKPILSRMSAKKKEIPDAKDP------RT 123
Query: 210 SRVAVMPYELLIQSSLQNQSFLPLKSKHKRMRLRLPLRPSFLTTLPLSSTYTPFGANLFE 269
+LL+ ++L + P + PL L S +G
Sbjct: 124 HNKRTQHGKLLVFAALSCSATNPTGT--------TPLNVVSLADKTHQSYPKDYGLQSSI 183
Query: 270 ENSRLSTNKQSHSIHTALRSFTPTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFND 329
E +L + A R I RIK+LP E + I + ++ + +SEFN
Sbjct: 184 EEPKLDFDS------IASRLQVQRFIDRIKALPF--RETSVILGIFEQDGCFQTVSEFNA 243
Query: 330 LFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRG 389
L M V E +AL L + +S+YGLVP+S TFSIMIRCYC+K +LD A RVL M+ G
Sbjct: 244 LLMALVIAKEPDIALSLFNEVSAYGLVPDSLTFSIMIRCYCEKNDLDEAIRVLVHMVENG 303
Query: 390 HYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEAC 449
YPN AT+ L+N+ CKRG+ Q+ALE++EV+GRIG KPTV+ YNCLLKGLCYVGRVE+A
Sbjct: 304 FYPNAATITVLINSLCKRGRLQRALEVLEVMGRIGCKPTVQIYNCLLKGLCYVGRVEDAY 363
Query: 450 EMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGY 509
EM+ +KKD++ PDIYT+TA+MDG CKVGRSDEAMELL+EA E GL P VVTFNTLFNGY
Sbjct: 364 EMLMRIKKDAIKPDIYTFTAVMDGFCKVGRSDEAMELLDEAVEMGLTPDVVTFNTLFNGY 423
Query: 510 CKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEA 569
CKEGRP++G+ VL +MK+ NC PD ITY+TLLHGL+KWGK R ALR YKEMV +G ++
Sbjct: 424 CKEGRPMEGLNVLKQMKERNCNPDCITYSTLLHGLLKWGKTRNALRVYKEMVENGVEVDG 483
Query: 570 KMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEAL 629
++MN +R L +RS KEKDLLEDAH+VFEKM+++ ID STYGL+IQ LC + A+
Sbjct: 484 RLMNNLVRGLCRRSRKEKDLLEDAHEVFEKMQNEVLGIDASTYGLMIQTLCMEKKMDAAV 543
Query: 630 ANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLG----HGIPFSTTSFDLI 689
L MIG GYSP IT + V+++LC G EAL +L G + S++ +
Sbjct: 544 VCLQEMIGMGYSPWIITFNNVIKTLC----VEGKVTEALLVLSIMYEGGRGTNGISYNPL 603
Query: 690 INELNKQGMRLSASNVYGLALKRGVNPTKTPR 716
I+ LN++G L +VYG A+KRGV P P+
Sbjct: 604 IHGLNRRGSFLGGCSVYGAAVKRGVIPNTKPQ 604
BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match:
A0A6J5V7D1 (PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS40610 PE=3 SV=1)
HSP 1 Score: 506.9 bits (1304), Expect = 1.4e-139
Identity = 295/624 (47.28%), Postives = 389/624 (62.34%), Query Frame = 0
Query: 90 ALTEEMAVIKKFGDEHSNLLDQYERLSFEARLNQAMLERSLSEPRMLRSQPQVLF--AGS 149
A + A+++ FGD+ S+LLD +ERLS E +LNQAML RSLSEP +RSQ +L A S
Sbjct: 13 AEVNKQAILRTFGDDKSSLLDHFERLSVELKLNQAMLRRSLSEPTQIRSQQPLLICQAPS 72
Query: 150 VQLPYLITTTNQPRKGRCGSTFNFNNLLNNLLKPILERKGRAKKERPHFKNPMDQIEAQF 209
P + R+G F+ +L ++KPIL R KKE P K+P +
Sbjct: 73 ESEPPPPPLVTKKRRGS-----GFSKVLKKMIKPILSRMSAKKKEIPDAKDP------RT 132
Query: 210 SRVAVMPYELLIQSSLQNQSFLPLKSKHKRMRLRLPLRPSFLTTLPLSSTYTPFGANLFE 269
+LL+ ++L + P + PL L S +G
Sbjct: 133 HNKRTQHGKLLVFAALSCSATNPTGT--------TPLNVVSLADKTHQSYPKDYGLQSSI 192
Query: 270 ENSRLSTNKQSHSIHTALRSFTPTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFND 329
E +L + A R I RIK+LP E + I + ++ + +SEFN
Sbjct: 193 EEPKLDFDS------IASRLQVQRFIDRIKALPF--RETSVILGIFEQDGCFQTVSEFNA 252
Query: 330 LFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRG 389
L M V E +AL L + +S+YGLVP+S TFSIMIRCYC+K +LD A RVL M+ G
Sbjct: 253 LLMALVIAKEPDIALSLFNEVSAYGLVPDSLTFSIMIRCYCEKNDLDEAIRVLVHMVENG 312
Query: 390 HYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEAC 449
YPN AT+ L+N+ CKRG+ Q+ALE++EV+GRIG KPTV+ YNCLLKGLCYVGRVE+A
Sbjct: 313 FYPNAATITVLINSLCKRGRLQRALEVLEVMGRIGCKPTVQIYNCLLKGLCYVGRVEDAY 372
Query: 450 EMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGY 509
EM+ +KKD++ PDIYT+TA+MDG CKVGRSDEAMELL+EA E GL P VVTFNTLFNGY
Sbjct: 373 EMLMRIKKDAIKPDIYTFTAVMDGFCKVGRSDEAMELLDEAVEMGLTPDVVTFNTLFNGY 432
Query: 510 CKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEA 569
CKEGRP++G+ VL +MK+ NC PD ITY+TLLHGL+KWGK R ALR YKEMV +G ++
Sbjct: 433 CKEGRPMEGLNVLKQMKERNCNPDCITYSTLLHGLLKWGKTRNALRVYKEMVENGVEVDG 492
Query: 570 KMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEAL 629
++MN +R L +RS KEKDLLEDAH+VFEKM+++ ID STYGL+IQ LC + A+
Sbjct: 493 RLMNNLVRGLCRRSRKEKDLLEDAHEVFEKMQNEVLGIDASTYGLMIQTLCMEKKMDAAV 552
Query: 630 ANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLG----HGIPFSTTSFDLI 689
L MIG GYSP IT + V+++LC G EAL +L G + S++ +
Sbjct: 553 VCLQEMIGMGYSPWIITFNNVIKTLC----VEGKVTEALLVLSIMYEGGRGTNGISYNPL 605
Query: 690 INELNKQGMRLSASNVYGLALKRG 708
I+ LN++G L +VYG A+KRG
Sbjct: 613 IHGLNRRGSFLGGCSVYGAAVKRG 605
BLAST of Lsi03G022800 vs. NCBI nr
Match:
XP_038904608.1 (pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida])
HSP 1 Score: 806.2 bits (2081), Expect = 2.3e-229
Identity = 413/490 (84.29%), Postives = 429/490 (87.55%), Query Frame = 0
Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
+ L L PSF TT PLS TYTPF AN E SRLS NKQSHSI T SFT
Sbjct: 1 MHLALPPSFFTTRPLSYTYTPFAANFCGEYSRLSANKQSHSIDTGQHSFTHNAHASPFKL 60
Query: 300 ----PTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELHLALKLL 359
PTR+TRIKSLPIPSEEGTEIFIMSQK TEIRN+SEFND MDFVSENEL LALKLL
Sbjct: 61 EIEIPTRVTRIKSLPIPSEEGTEIFIMSQKRTEIRNVSEFNDRLMDFVSENELDLALKLL 120
Query: 360 SNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLVNAFCKR 419
SNISSYGLVPNSRTFSIMIR YCKKGEL+ AG+VLEQM+GRGH PNDATV LVNAFCKR
Sbjct: 121 SNISSYGLVPNSRTFSIMIRGYCKKGELETAGKVLEQMVGRGHNPNDATVTVLVNAFCKR 180
Query: 420 GKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTY 479
GKTQKALEMVE+VGRIGRKPTV+TYNCLLKGLCYVGRVEEACEMVTEMKKD LIPDIYTY
Sbjct: 181 GKTQKALEMVEMVGRIGRKPTVQTYNCLLKGLCYVGRVEEACEMVTEMKKDRLIPDIYTY 240
Query: 480 TALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQ 539
TALMDGLCKVGRSDEAMELL EAE NGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQ
Sbjct: 241 TALMDGLCKVGRSDEAMELLIEAEGNGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQ 300
Query: 540 MNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSWKEK 599
+NC PDRITYTTLLHGLIKWGKIRIAL TYKEMVSSGHTIEAKMMNTFMRAL +RSW EK
Sbjct: 301 INCTPDRITYTTLLHGLIKWGKIRIALSTYKEMVSSGHTIEAKMMNTFMRALCRRSWNEK 360
Query: 600 DLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRAITI 659
DLLEDAHQVFEKMKDD+QVID+STYGLLIQALCSGNMISEALANLHHMI KGYSPRAI I
Sbjct: 361 DLLEDAHQVFEKMKDDYQVIDQSTYGLLIQALCSGNMISEALANLHHMIEKGYSPRAIII 420
Query: 660 DVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGLALK 716
DVVVQ+LC H GS +EAL +LGHGIPF SFDLII+ELNKQ MR SA NVYGLALK
Sbjct: 421 DVVVQTLC----HRGSVDEALLVLGHGIPFRRFSFDLIIDELNKQEMRFSACNVYGLALK 480
BLAST of Lsi03G022800 vs. NCBI nr
Match:
XP_022982589.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 768.8 bits (1984), Expect = 4.0e-218
Identity = 394/496 (79.44%), Postives = 426/496 (85.89%), Query Frame = 0
Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
+RL LRPSFLTTLPLSST TPFGAN E N R S NK+ HS+ SF
Sbjct: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60
Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
PTR+T RIKSLPIPSEEGTEIFIMSQK EI+NI EFNDLFM+FVSE+EL
Sbjct: 61 GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
LALKLLSN++SYGLVPNSRTFSIMIRCYCKKG+LDNA RVL QMLGRG PNDAT+ LV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180
Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
PDIYTYTALMDGLCKVGRSDEAMELL+EAE NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
L KMKQMNC PDRI+Y+TLLHGLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
R+WKEKDLLEDAHQVFEKMK++FQVIDRSTYGLLIQALCSGN SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
P AITIDV+VQ+LC H+GSA+EALC+LGHGI FS SFDLII ELN++GM LSA +V
Sbjct: 421 PWAITIDVMVQALC----HSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSV 480
BLAST of Lsi03G022800 vs. NCBI nr
Match:
KAG6580429.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 766.5 bits (1978), Expect = 2.0e-217
Identity = 391/496 (78.83%), Postives = 424/496 (85.48%), Query Frame = 0
Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
+R+ LRPSFLTTLPLSST TPFGAN EEN RLS NK+ HS+ SF
Sbjct: 1 MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
PTR+T IKSLPIPSEEGTEIFIMSQK EI+NI EFNDLFM+FVSE+EL
Sbjct: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+L+NA RVL QMLGRG PNDAT+ LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180
Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
R+WKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
PRAITIDV+VQ+LC H+G A+EALC+LGHGI FS SFDLII ELN++GM SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNV 480
BLAST of Lsi03G022800 vs. NCBI nr
Match:
XP_022935128.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])
HSP 1 Score: 766.1 bits (1977), Expect = 2.6e-217
Identity = 390/496 (78.63%), Postives = 424/496 (85.48%), Query Frame = 0
Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
+R+ LRPSFLTTLPLSST TPFGAN EEN RLS NK+ HS+ SF
Sbjct: 1 MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60
Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
PTR+T IKSLPIPSEEGTEIFIMSQK EI+NI EFNDLFM+FVSE+EL
Sbjct: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+L+NA RVL QMLGRG PNDAT+ LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180
Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
R+WKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
PRAITIDV+VQ+LC H+G A+EALC+LGHGI FS SFDL+I ELN++GM SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNV 480
BLAST of Lsi03G022800 vs. NCBI nr
Match:
KAG7017186.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 764.6 bits (1973), Expect = 7.5e-217
Identity = 391/496 (78.83%), Postives = 421/496 (84.88%), Query Frame = 0
Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
+RL LRPSFLTTLPLSST TPFGAN EEN RLS NK+ HS+ SF
Sbjct: 1 MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60
Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
PTR+T IKSLPIPSEEGTEIF MSQK EI+NI EFNDLFM+FVSE+EL
Sbjct: 61 GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120
Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+LDNA RVL QMLG G PNDAT+ LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180
Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
NAFCKRGK QKA EMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240
Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300
Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360
Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
RSWKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN SEALANLHHMIGKGYS
Sbjct: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420
Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
PRAITIDV+VQ+LC H+G A+EALC+LGHGI FS SFDLII ELN++GM SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNV 480
BLAST of Lsi03G022800 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 189.1 bits (479), Expect = 1.2e-47
Identity = 112/372 (30.11%), Postives = 183/372 (49.19%), Query Frame = 0
Query: 325 FNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQML 384
+N + S +L LALK+L+ + S P T++I+I +G +D A +++++ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 385 GRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVE 444
RG P+ T ++ CK G +A EMV + G +P V +YN LL+ L G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 445 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLF 504
E +++T+M + P++ TY+ L+ LC+ G+ +EAM LL +E GL P +++ L
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 505 NGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHT 564
+C+EGR I L M C+PD + Y T+L L K GK AL + ++ G +
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 565 IEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMIS 624
+ NT AL W D + H + E M + D TY +I LC M+
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495
Query: 625 EALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLII 684
EA L M + P +T ++V+ C H + N ++G+G + T++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555
Query: 685 NELNKQGMRLSA 697
+ G R A
Sbjct: 556 EGIGFAGYRAEA 562
BLAST of Lsi03G022800 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 186.8 bits (473), Expect = 6.0e-47
Identity = 115/428 (26.87%), Postives = 201/428 (46.96%), Query Frame = 0
Query: 315 KHTEIRNISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELD 374
KH + N + L N ++ AL+LL + G VP++ TF+ +I CK ++
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 375 NAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV------------------- 434
A +++ +ML RG P+D T +L+N CK G+ A ++
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364
Query: 435 -------------EVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDI 494
++V G P V TYN L+ G G V A E++ +M+ P++
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 495 YTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNK 554
Y+YT L+DG CK+G+ DEA +LNE +GLKP+ V FN L + +CKE R + + + +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 555 MKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSW 614
M + C PD T+ +L+ GL + +I+ AL ++M+S G NT + A +R
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG- 544
Query: 615 KEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRA 674
+++A ++ +M +D TY LI+ LC + +A + M+ G++P
Sbjct: 545 ----EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604
Query: 675 ITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGL 711
I+ ++++ LC + + ++ G +F+ +IN L + G ++
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664
BLAST of Lsi03G022800 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 182.6 bits (462), Expect = 1.1e-45
Identity = 113/367 (30.79%), Postives = 182/367 (49.59%), Query Frame = 0
Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
N+ +N L + ++ KLL +++ GL PN +++++I C++G + VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYV 440
+M RG+ ++ T L+ +CK G +AL M + R G P+V TY L+ +C
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 441 GRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTF 500
G + A E + +M+ L P+ TYT L+DG + G +EA +L E +NG PSVVT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 501 NTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVS 560
N L NG+C G+ D I VL MK+ PD ++Y+T+L G + + ALR +EMV
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 561 SGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSG 620
G + ++ ++ E+ ++A ++E+M D TY LI A C
Sbjct: 479 KGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 538
Query: 621 NMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGH--GIPFSTT 680
+ +AL + M+ KG P +T V++ L + S T A L L + +P T
Sbjct: 539 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGL-NKQSRTREAKRLLLKLFYEESVPSDVT 598
Query: 681 SFDLIIN 686
LI N
Sbjct: 599 YHTLIEN 599
BLAST of Lsi03G022800 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 181.4 bits (459), Expect = 2.5e-45
Identity = 108/391 (27.62%), Postives = 195/391 (49.87%), Query Frame = 0
Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
++S FN L ++L A+ +L ++ SYGLVP+ +TF+ +++ Y ++G+LD A R+
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV-EVVGRIGRKPTVKTYNCLLKGLCY 440
EQM+ G ++ +V +V+ FCK G+ + AL + E+ + G P T+N L+ GLC
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 441 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVT 500
G V+ A E++ M ++ PD+YTY +++ GLCK+G EA+E+L++ P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 501 FNTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMV 560
+NTL + CKE + + + + +PD T+ +L+ GL R+A+ ++EM
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 561 SSGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCS 620
S G + N + +L K L++A + ++M+ TY LI C
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 487
Query: 621 GNMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTS 680
N EA M G S ++T + ++ LC + +A ++ G +
Sbjct: 488 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 547
Query: 681 FDLIINELNKQGMRLSASNVYGLALKRGVNP 711
++ ++ + G A+++ G P
Sbjct: 548 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
BLAST of Lsi03G022800 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 176.4 bits (446), Expect = 8.2e-44
Identity = 106/368 (28.80%), Postives = 174/368 (47.28%), Query Frame = 0
Query: 324 EFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQM 383
E N+ V EL K L N+ +G VP+ + +IR +C+ G+ A ++LE +
Sbjct: 104 ESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL 163
Query: 384 LGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRV 443
G G P+ T +++ +CK G+ AL V+ R+ P V TYN +L+ LC G++
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLCDSGKL 223
Query: 444 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTL 503
++A E++ M + PD+ TYT L++ C+ AM+LL+E + G P VVT+N L
Sbjct: 224 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 283
Query: 504 FNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGH 563
NG CKEGR + I LN M C P+ IT+ +L + G+ A + +M+ G
Sbjct: 284 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 343
Query: 564 TIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMI 623
+ N + L + K LL A + EKM + +Y L+ C +
Sbjct: 344 SPSVVTFNILINFLCR-----KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 403
Query: 624 SEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLI 683
A+ L M+ +G P +T + ++ +LC + L G +++ +
Sbjct: 404 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 463
Query: 684 INELNKQG 692
I+ L K G
Sbjct: 464 IDGLAKAG 463
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SR00 | 1.7e-46 | 30.11 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
Q9FMF6 | 8.5e-46 | 26.87 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9FIX3 | 1.6e-44 | 30.79 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 3.6e-44 | 27.62 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q0WVK7 | 1.1e-42 | 29.16 | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1J506 | 1.9e-218 | 79.44 | pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc... | [more] |
A0A6J1F9P1 | 1.3e-217 | 78.63 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... | [more] |
A0A6J1DW66 | 1.3e-195 | 73.48 | pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charanti... | [more] |
A0A6J5VAX5 | 3.3e-141 | 47.15 | PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS4... | [more] |
A0A6J5V7D1 | 1.4e-139 | 47.28 | PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS4... | [more] |
Match Name | E-value | Identity | Description | |
XP_038904608.1 | 2.3e-229 | 84.29 | pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida] | [more] |
XP_022982589.1 | 4.0e-218 | 79.44 | pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucur... | [more] |
KAG6580429.1 | 2.0e-217 | 78.83 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022935128.1 | 2.6e-217 | 78.63 | pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata] | [more] |
KAG7017186.1 | 7.5e-217 | 78.83 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
AT3G04760.1 | 1.2e-47 | 30.11 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G64320.1 | 6.0e-47 | 26.87 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 1.1e-45 | 30.79 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G53700.1 | 2.5e-45 | 27.62 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G09900.1 | 8.2e-44 | 28.80 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |